Ewingella americana: GXP68_09725
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Entry
GXP68_09725 CDS
T06747
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
eame
Ewingella americana
Brite
KEGG Orthology (KO) [BR:
eame00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eame03016
]
GXP68_09725 (rnd)
Enzymes [BR:
eame01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
GXP68_09725 (rnd)
Transfer RNA biogenesis [BR:
eame03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
GXP68_09725 (rnd)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
QMV51602
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All DBs
Position
2106482..2107603
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AA seq
373 aa
AA seq
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MNYQLITTNDALAQVCLQAQAHSQIALDTEFVRTRTYYPQLGLIQLFDGETLTLIDPLPI
TAWQPFIDLLVNPNVVKFLHAGSEDLEVFLNAFGVLPVPLIDTQILAAFSGRPLSCGFAR
LVAETTGVELDKSESRTDWIARPLSEKQCVYAAADVWYLLPLAEQLMRETQEAGWMDAAL
DECLSLCRRRAEVLQPEQAYLDITNAFQLRPRQLACLQKLASWRLTQARQRDLAVNFVVR
EENLWQVARYQPTSLGELEALGLSGPEIRYHGRTLLALVAEANAMDEQELPAPLSSLIDQ
PGYRKVFKDIKALIQTVSEESGLSVELLASRRQINQLLNWHWQLKTKESEPEIISGWRGD
LLKNRLLEILKDY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagttgattaccaccaatgacgcgcttgcgcaggtttgtttgcaagctcag
gctcatagccagattgcccttgataccgagttcgtcagaacccgcacttactacccgcag
ttagggctgatccagctgtttgatggtgaaacgctgaccctgattgaccctttgccaatc
acagcgtggcagccttttattgacctgctggtcaatccaaacgtggtgaaattcctccac
gcaggcagtgaagacctcgaagtattcctcaacgcctttggcgtgcttcccgttccgctg
attgatacccagatcctcgccgcctttagcgggcgtccgctctcctgcggctttgcgcgt
ttggtggctgaaaccaccggcgttgaactggataaaagtgaatcacgcaccgactggatt
gcccgcccgctgagtgaaaagcagtgtgtctacgccgccgccgacgtgtggtatctgctg
ccgttggccgagcagctgatgcgcgaaacccaagaagcgggctggatggacgccgcgctg
gatgagtgcctgtcgctatgccgccgccgtgccgaagtgttgcagccggagcaggcttat
ctcgacattaccaatgctttccagctgcgcccgcgccagttggcctgcttacagaagctg
gcatcatggcgtttaactcaggctcgccagcgcgacctggcggtgaacttcgtggtgaga
gaagagaatctgtggcaggtggcgcgctaccagccaacctcgcttggcgagctggaagct
ttaggcctgagtggcccggaaattcgctaccacggccgcacgctgttagcgctggtggct
gaagccaatgcgatggacgagcaggagctgcctgcgccactgtctagcctgattgaccag
ccgggctaccgcaaggtattcaaagatatcaaagcgcttattcagactgtcagtgaagag
agtgggctaagcgtcgagctattagcctcaagacgccaaattaaccagttattaaattgg
cactggcagttaaaaaccaaagagagcgagccggaaattattagcggctggcgcggtgat
ttacttaaaaaccgcttactggaaatcctcaaagattattaa
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