Klebsiella aerogenes EA1509E: CCG31074
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Entry
CCG31074 CDS
T02447
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ear
Klebsiella aerogenes EA1509E
Pathway
ear03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ear00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CCG31074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ear03400
]
CCG31074
DNA repair and recombination proteins [BR:
ear03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CCG31074
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CCG31074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
AAA_22
SBDS_domain_II
IF2_N
DUF4686
Motif
Other DBs
NCBI-ProteinID:
CCG31074
LinkDB
All DBs
Position
complement(2351923..2353938)
Genome browser
AA seq
671 aa
AA seq
DB search
MSKPFKLHSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTTGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDVFPAESDDIALRIELFDEEVERLSLFDPLTGHVESSIPR
YTIYPKTHYVTPRERIVQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPMKFEEFEALAPQTIYVSATPGPYELEKSGDEVVDQVVRPTGLLD
PVIEVRPVATQVDDLLSEIRTRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQRYNEEHGIVPQGLNKKVVDILALG
QNIAKTKAKGRGKARSPVEADSVELTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRDQL
HQLRELFIAAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaccattcaagctgcactccgcattccgtccttccggcgatcagcccgaagcc
atccgccgtctggaagaggggctggaagatggccttgcgcatcaaaccctgcttggggta
accggttcggggaaaaccttcaccatcgccaacgttatcgctgacttacagcgcccgacg
atggtgctggcgccgaacaaaaccctggcggcgcagctgtatggcgagatgaaagagttc
tttcccgagaatgcggtggagtattttgtctcctactacgattattaccagcctgaagcc
tacgtaccgagctcggatacctttatcgaaaaagacgcctcggtgaacgaacacattgag
cagatgcgtctgtcggccaccaaagcgttgctcgaacggcgcgatgtagtggtggtggct
tcggtttccgccatctacggtcttggcgacccggatctgtatctaaagatgatgctgcac
ctgaccaccggcatgctgatcgaccagcgggcgatcctgcgtcggctggcggaactgcaa
tacacccgcaacgatcaggccttccagcgcggcactttccgcgtccgcggcgaggttatc
gatgttttcccggcggaatccgatgatatcgcgctgcgtattgaactgtttgacgaagag
gtcgagcggctatcgctgtttgacccgctgaccggccacgtcgaatcgtccattccacgc
tataccatctatccgaagacccactacgttacgccgcgcgagcgtatcgtacaggcgatg
gaagagatcaaagacgagctggctgaccgccgcaaggtcctgctggcgaacaataaactg
cttgaagagcagcggctgagccagcgcactcagttcgacctcgaaatgatgaacgagctg
ggctactgctcggggattgaaaactactcgcgctttctctccgggcgcgggccgggcgag
ccgccgccgacgctgttcgactacctgccggcggatggcctgctggttatcgatgaatcg
cacgtgactatcccgcaaatcggcggtatgtaccgtggcgaccgggcgcgtaaagagacg
ctggtggaatatggctttcgcctgccgtcagcgctggataaccggccgatgaagttcgaa
gagtttgaagcgctggcgccgcagaccatctacgtttcagcgacgccgggtccctatgag
ctggaaaaatccggcgatgaggtggtagaccaggtcgttcgcccaacgggcctactggat
ccggttatcgaagtgcggccggtggcgacgcaggtcgacgatctgttatcagaaatccgt
acccgtgcggcgatcaatgagcgtgtactggtgacgacgctgaccaaacgcatggcggag
gatttaaccgaatacctggaagagcacggtgaacgggtgcgctatctgcactccgatatc
gataccgtcgagcgtatggaaattattcgcgatctgcgtcttggcgagttcgacgtgctg
gtgggtatcaacctgctgcgcgaagggctggatatgccggaagtatcgttggtggcgata
cttgatgccgataaagagggcttcctgcgttccgagcgctcgcttatccagaccatcggc
cgcgcggcgcgtaacgtgaacggtaaggcgattctttacggcgataaaatcacgccatcg
atggcgaaggcgatcggtgaaaccgaacgccgccgcgagaagcagcagcgttataacgaa
gagcacggtattgtgccgcagggtcttaataagaaagtggtcgatattctggcgctgggt
cagaacatagcgaagaccaaagccaaaggccgtggcaaagcccgttctccggtggaagcc
gatagcgtcgaactgacgccgaaagcgctgcagcagaagatccacgagctggaagggcaa
atgatgcagcatgcccagaaccttgagttcgaagaggccgcgcagatccgcgatcaattg
catcagctacgcgaactgtttattgcggcatcataa
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integrated database retrieval system
