Enterobacteriaceae bacterium ENNIH2: C2U52_28370
Help
Entry
C2U52_28370 CDS
T05417
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
ebc
Enterobacteriaceae bacterium ENNIH2
Pathway
ebc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ebc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
C2U52_28370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ebc03400
]
C2U52_28370
DNA repair and recombination proteins [BR:
ebc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
C2U52_28370
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
C2U52_28370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SBDS_domain_II
UB2H
AAA_30
Helicase_C_2
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AUV09897
LinkDB
All DBs
Position
complement(5374065..5376086)
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFRPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTVANVIADLQRPT
MVLAPNKTLAAQLYGEMKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVIVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGHVESTIQR
FTVYPKTHYVTPRERIVQAMEEIKVELAERRKVLLENNKLLEEQRLTQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQIGGMFRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVIDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAMGETERRREKQQQYNEEHGITPQGLNKKVVDILSLG
ESLAKTKGKGRGKSRTPAQVEAAELALTPKALQQKIHELEGQMMQHAQNLEFEEAAKCRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccattcaaactgaattccgcttttcgtccctccggcgatcagccagaagct
attcgtcgcctggaagaaggtctcgaagatggtctggctcatcagactttgctgggcgtg
accggttcagggaaaacgttcaccgtggcgaatgtgattgccgatttacagcgcccgacg
atggtgctggcgccgaacaagacccttgcggcacagttgtatggcgaaatgaaagagttc
ttcccggataacgcggtggaatatttcgtctcttactacgactactatcagccggaagcc
tatgtgccgagttcggacacgtttattgaaaaagatgcctcggtgaacgaacacattgag
cagatgcgactgtcggccactaaagcgctgcttgaacgtcgggatgtcattgtggtggca
tcggtctctgcgatttacggtctgggcgatccggacctgtacctgaagatgatgctgcac
ctgacaaaagggatgatcatcgatcaacgctccatactgcgtcggctggcggagctgcag
tatacccgcaatgatcaggcgtttcagcgcggcacctttcgcgtgcgcggcgaagtgatc
gatatcttcccggcagaatcggacgatattgccctgcgcgttgagctgtttgatgaagaa
gttgagcgtctgtcgctgtttgatccgctgaccgggcacgttgagtcgaccatccagcgt
tttacggtctatcccaaaactcactacgtcacgccgcgtgagcgcatcgttcaggcgatg
gaagagatcaaggtcgagctggccgagcggcgcaaagtgctgctggagaataataagctg
ctggaagaacagcggctgacccagcgcacccagtttgatctggaaatgatgaatgagttg
ggctattgctccggcatcgaaaactattcgcgctacctttccgggcgcgggccgggcgag
ccgccgccgacgctgtttgattaccttccggcggatggcctgctggtgattgatgaatcc
cacgtcaccattccgcaaattggcggtatgttccgcggcgaccgcgcgcgtaaagagacg
ctggtggagtacggtttccgtctgccgtcagcgctggataaccgcccactgaaattcgaa
gagttcgaagcgctggcaccgcaaaccatttatgtatcggcgacgccgggcaactatgag
ctggaaaaatccggtggcgatgtgattgaccaggttgtgcgcccgaccggcttgctcgat
ccgattatcgaagtgcgaccggtggcaacccaggtggacgatctgctctccgagatccgc
atacgcgctgccattaacgagcgcgtgctggtcacgacactgaccaaacgcatggcggaa
gatctgaccgaatatctggaagaacacggtgagcgggtgcgttacctgcactccgacatt
gatacggtcgaacgtatggagattatccgcgatttacgccttggcgagttcgatgtgctg
gtgggcatcaacttgttacgtgaggggctggatatgccggaagtgtcgctggtggcaatt
ctggatgcggataaagaagggttcctgcgttctgagcgttcgctgattcagaccattggt
cgtgcggcgcgtaacgtcaacgggaaggccattctctacggcgataaaattaccccatcc
atggcgaaggcgatgggggaaaccgagcgtcgtcgcgagaaacagcagcagtacaacgaa
gaacacggcatcaccccgcaggggttgaacaaaaaagtggtggatattctgagcctcggc
gaaagcctggcgaagaccaaaggcaaaggtcgcggtaaatcgcgcacaccggctcaggtg
gaagctgccgaactggcattaaccccgaaagcgctgcagcagaaaattcacgagctggaa
gggcagatgatgcaacatgcgcagaatctcgaattcgaagaggcggcgaaatgccgcgat
caactgcatcaactgcgggaattgtttattgccgcctcgtaa
DBGET
integrated database retrieval system
