KEGG   Escherichia coli BL21-Gold(DE3)pLysS AG: ECBD_3472
Entry
ECBD_3472         CDS       T00939                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
ebd  Escherichia coli BL21-Gold(DE3)pLysS AG
Brite
KEGG Orthology (KO) [BR:ebd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ebd03016]
    ECBD_3472
Enzymes [BR:ebd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     ECBD_3472
Transfer RNA biogenesis [BR:ebd03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    ECBD_3472
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: ACT30471
UniProt: A0A140NFI1
Structure
LinkDB
Position
3618839..3619369
AA seq 176 aa
MSEPQRLFFAIDLPAEIREQIIHWRAKHFPPEAGRPVAADNLHLTLAFLGEVSAEKEKAL
SLLAGRIRQPGFTLTLDDAGQWLRSRVVWLGMRQPPRGLIQLANMLRSQAARSGCFQSNR
PFHPHITLLRDASEAVTIPPPGFNWSYAVTEFTLYASSFARGRTRYTPLKRWALTQ
NT seq 531 nt   +upstreamnt  +downstreamnt
atgtctgaaccgcaacgtctgttctttgctatcgacttacctgcagaaatccgcgaacag
attatccactggcgcgccaaacacttcccacctgaggcgggacgtccggtcgccgccgat
aatttgcatctgactctggcatttttaggcgaagtgagcgccgagaaagagaaggcgctt
tctcttttagccggacggattcgtcaacctggtttcacactcacgcttgatgacgccgga
caatggctgcgttcgcgtgtggtgtggttagggatgcgtcagcctccacgcggcttaatc
cagctggcgaatatgctccgttcacaggctgcccgcagcggttgttttcaaagcaatcgt
ccgtttcatccacatattaccttattgcgcgacgccagcgaggcggtgacaatcccgccg
ccgggttttaactggtcttatgcggtgacggagttcaccctttacgcctcctcgtttgcc
cgtggacgcacacgctacacgccgctaaaacgctgggcgctcacgcaataa

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