Escherichia coli BL21(DE3): B21_01361
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Entry
B21_01361 CDS
T02096
Symbol
ydbK
Name
(GenBank) predicted pyruvate:flavodoxin oxidoreductase
KO
K03737
pyruvate-ferredoxin/flavodoxin oxidoreductase [EC:
1.2.7.1
1.2.7.-]
Organism
ebe
Escherichia coli BL21(DE3)
Pathway
ebe00010
Glycolysis / Gluconeogenesis
ebe00020
Citrate cycle (TCA cycle)
ebe00620
Pyruvate metabolism
ebe00650
Butanoate metabolism
ebe01100
Metabolic pathways
ebe01110
Biosynthesis of secondary metabolites
ebe01120
Microbial metabolism in diverse environments
ebe01200
Carbon metabolism
ebe01210
2-Oxocarboxylic acid metabolism
Module
ebe_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ebe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
B21_01361 (ydbK)
00020 Citrate cycle (TCA cycle)
B21_01361 (ydbK)
00620 Pyruvate metabolism
B21_01361 (ydbK)
00650 Butanoate metabolism
B21_01361 (ydbK)
Enzymes [BR:
ebe01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.1 pyruvate synthase
B21_01361 (ydbK)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POR_N
POR
EKR
PFOR_II
Fer4_7
Fer4_16
Fer4
Fer4_21
Fer4_10
Fer4_9
Fer4_2
Fer4_8
Fer4_6
Fer4_17
Fer4_18
Transketolase_C
Fer4_4
Fer4_15
FlgM
Motif
Other DBs
NCBI-ProteinID:
CAQ31878
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Position
complement(1412813..1416337)
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AA seq
1174 aa
AA seq
DB search
MITIDGNGAVASVAFRTSEVIAIYPITPSSTMAEQADAWAGNGLKNVWGDTPRVVEMQSE
AGAIATVHGALQTGALSTSFTSSQGLLLMIPTLYKLAGELTPFVLHVAARTVATHALSIF
GDHSDVMAVRQTGCAMLCAANVQEAQDFALISHIATLKSRVPFIHFFDGFRTSHEINKIV
PLADDTILDLMPQAEIDAHRARALNPEHPVIRGTSANPDTYFQSREATNPWYNAVYDHVE
QAMNDFAAATGRQYQPFEYYGHPQAERVIILMGSAIGTCEEVIDELLTRGENVGVLKVRL
YRPFSAKHLLQALPGSVRSVAVLDRTKEPGAQAEPLYLDVMTALAEAFNNGERETLPRVI
GGRYGLSSKEFGPDCVLAVFAELNAAKPKARFTVGIYDDVTNLSLPLPENTLPNSAKLEA
LFYGLGSDGSVSATKNNIKIIGNSTPWYAQGYFVYDSKKAGGLTVSHLRVSEQPIRSAYL
ISQADFVGCHQLQFIDKYQMAERLKPGGIFLLNTPYSADEVWSRLPQEVQAMLNQKKARF
YVINAAKIARECGLAARINTVMQMAFFHLTQILPGDSALAELQGAIAKSYSSKGQDLVER
NWQALALARESVEEVPLQPVNPHSANRPQVVSDAAPDFVKTVTAAMLAGLGDALPVSALP
PDGTWPMGTTRWEKRNIAEEIPIWKEELCTQCNHCVAACPHSAIRAKVVPPEAMENAPAS
LHSLDVKSRDMRGQKYVLQVAPEDCTGCNLCVEVCPAKDRQNPEIKAINMMSRLEHVEEE
KINYDFFLNLPEIDRSKLERIDIRTSQLITPLFEYSGACSGCGETPYIKLLTQLYGDRML
IANATGCSSIYGGNLPSTPYTTDANGRGPAWANSLFEDNAEFGLGFRLTVDQHRVRVLRL
LDQFADKIPAELLTALKSDATPEVRREQVAALRQQLNDVAEAHELLRDADALVEKSIWLI
GGDGWAYDIGFGGLDHVLSLTENVNILVLDTQCYSNTGGQASKATPLGAVTKFGEHGKRK
ARKDLGVSMMMYGHVYVAQISLGAQLNQTVKAIQEAEAYPGPSLIIAYSPCEEHGYDLAL
SHDQMRQLTATGFWPLYRFDPRRADEGKLPLALDSRPPSEALEETLLHEQRFRRLNSQQP
EVAEQLWKDAAADLQKRYDFLAQMAGKAEKSNTD
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgattactattgacggtaatggcgcggttgcttcggtggcgtttcgcaccagtgaagtt
atcgccatctaccctattacccccagttccacgatggcagaacaggctgatgcctgggcc
ggaaacggcttgaagaacgtttggggagacacaccacgcgtggttgaaatgcagtcggaa
gcgggtgctatcgctaccgtgcatggcgctttgcagacgggtgccctttcaacatcgttt
acgtcatcgcagggtttactgctgatgatcccgacgctgtacaaactggcaggcgaactc
acaccgtttgtcctgcatgtagcggcacgtaccgttgccacacatgcactctctattttt
ggcgatcattccgacgtcatggcggtgcgccagacgggttgcgcgatgttgtgtgcggca
aacgtccaggaagcgcaagactttgctctcatttcgcacatcgcgacgctgaaaagccgc
gtgccatttattcatttctttgatggtttccgcacgtcccacgaaatcaataaaattgtc
ccgctggccgatgacactattcttgatctcatgccgcaggccgaaattgatgctcatcgc
gcccgggcgctcaacccggaacatccggtgatccgcggtacgtccgccaatcctgacact
tatttccagtctcgcgaagccaccaacccctggtacaacgcggtctatgaccatgttgaa
caggcgatgaatgatttcgctgccgcgacaggtcgtcagtatcagccgtttgagtattac
gggcatccgcaagcggaacgggtgattatcctgatgggctctgccattggcacctgtgaa
gaagtgattgatgaattgctaacccgtggcgaaaatgtcggcgtgctgaaagttcgccta
taccgccccttctccgctaaacatttactgcaagctctgccgggatccgtacgcagcgtg
gcggtactggacagaaccaaagaacccggtgcccaggcagaaccgctctatctggatgtg
atgaccgcactggcagaagcctttaataatggcgagcgcgaaactctgccccgtgtcatt
ggtgggcgctatggtctttcatccaaagaatttggcccggactgtgtactggcggtattt
gccgagctcaacgcggctaaaccgaaagcgcgctttacggttggtatttacgatgatgtg
actaatctgtcactgccgttgccggaaaacaccctgccaaactcggcgaaactggaagcc
ttgttttatggccttggtagtgatggcagcgtttccgcgaccaaaaacaatatcaagatt
atcggtaattccacgccgtggtacgcacagggctattttgtttacgactccaaaaaggcg
ggcggcctgacggtttctcaccttcgagtgagcgaacagccgattcgttccgcttatctc
atttcccaggctgattttgttggctgccaccagttgcagtttatcgataaatatcagatg
gctgagcgtttaaaacctggcggcattttcctgctcaacacaccgtacagcgcagatgaa
gtgtggtcgcgcttgccgcaagaagttcaggccatgttaaaccagaaaaaagcgcgcttc
tatgtgattaacgcggcgaaaatcgcccgcgaatgtggcctggcggcccgtattaatacc
gtcatgcagatggcttttttccatctgacgcaaattctgcctggcgatagcgccctcgca
gaattgcagggtgcgattgccaaaagttacagtagcaaaggccaggatctggtggaacgc
aactggcaggctctggcgctggcgcgtgaatccgtagaagaagttccgttgcaaccggta
aatccgcacagcgccaatcgaccgcaagtggtttccgatgccgcccctgatttcgtgaaa
accgtaaccgctgcgatgctcgccgggcttggtgacgccctccccgtttcggcgctgccg
ccagacggcacctggccgatgggcactacgcgctgggaaaaacgcaatatcgccgaagag
atccccatctggaaagaggaactctgtacccaatgtaaccactgcgttgccgcttgccca
cactcagctattcgcgcaaaagtggtgccgcctgaagcgatggaaaacgcccctgccagc
ctgcattcgctggatgtgaaatcgcgtgatatgcgcgggcagaaatatgtcttgcaggtg
gcaccggaagattgcaccggttgtaacctgtgcgtcgaagtttgcccggcgaaagaccgt
cagaatccagagattaaagccatcaatatgatgtctcgcctggaacatgtcgaagaagag
aaaatcaattacgatttcttcctcaacctgccagaaatcgaccgtagcaaactggaacgt
attgatattcgtacatcgcagctgattacaccgctgtttgaatattcaggtgcttgctcc
ggttgtggcgagacgccgtatattaaattactgactcagctctatggcgaccggatgttg
atcgctaacgccactggctgttcttcaatttatggcggtaacctgccctctacaccgtat
accaccgatgccaacggtcgtgggccggcatgggcgaactctctatttgaagataatgcc
gaatttggccttggtttccgcctgacggtcgatcaacaccgtgtccgcgtgctgcgtctg
ctggatcaatttgccgataaaatcccggcggaattactgacggcgttgaaatcagacgcc
acgccagaggttcgtcgtgaacaggttgcagctttacgccagcaactcaacgatgttgcc
gaagcacatgaactgctacgtgatgcagatgcactggtggaaaaatcaatctggctgatt
ggtggtgatggctgggcttacgatatcggctttggcggtctggatcatgtattgagtttg
acggaaaacgtcaacattctggtgctggatacgcaatgctattccaacaccggtggtcag
gcgtcgaaagcgacaccgctgggtgcagtaactaaatttggcgagcacggcaaacgtaaa
gcgcgtaaagatcttggcgtcagtatgatgatgtacggtcatgtttatgtggcgcagatt
tctctcggcgcgcagctgaaccagacggtgaaagcgattcaggaagcggaagcgtatccg
gggccatcgctgatcattgcttatagcccgtgtgaagagcatggttacgatctggcactc
agccacgaccagatgcgccaactcacagctaccggcttctggccgctatatcgctttgat
ccgcgtcgtgccgatgaaggcaaactgccgctggccttggattcacgcccgccgtcagaa
gcactggaagaaacgttacttcacgagcaacgtttccgtcggctgaattcgcagcagcca
gaagtggcagaacagttatggaaagatgctgcagctgatttgcaaaaacgctatgacttc
ctggcacaaatggccggaaaagcggaaaaaagcaacaccgattaa
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integrated database retrieval system