Escherichia coli B REL606: ECB_01399
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Entry
ECB_01399 CDS
T00944
Symbol
ydcU
Name
(GenBank) predicted spermidine/putrescine transporter subunit
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
ebr
Escherichia coli B REL606
Pathway
ebr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ebr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECB_01399 (ydcU)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ebr02000
]
ECB_01399 (ydcU)
Transporters [BR:
ebr02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
ECB_01399 (ydcU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACT39072
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All DBs
Position
1483941..1484882
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AA seq
313 aa
AA seq
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MAMNVLQSPSRPGLGKVSGFFWRNPGLGLFLLLLGPLMWFGIVYFGSLLTLLWQGFYTFD
DFTMSVTPELTLANIRALFNPANYDIILRTLTMAVAVTIASAILAFPMAWYMARYTSGKM
KAFFYIAVMLPMWASYIVKAYAWTLLLAKDGVAQWFLQHLGLEPLLTAFLTLPAVGGNTL
STSGLGRFLVFLYIWLPFMILPVQAALERLPPSLLQASADLGARPRQTFRYVVLPLAIPG
IAAGSIFTFSLTLGDFIVPQLVGPPGYFIGNMVYSQQGAIGNMPMAAAFTLVPIILIALY
LAFVKRLGAFDAL
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaatgtattgcaatcaccttcacgtccaggtctgggtaaggtgtccggtttc
ttctggcgtaatccggggctggggctgtttttactgctgcttggcccactaatgtggttt
ggcattgtctatttcggctcgctgctgacactgttatggcagggattttatacttttgac
gatttcaccatgtcggtaacgccggaactgacgctggcgaatatccgtgcgctgtttaat
ccggcgaattacgacatcattctccgcacgctgactatggctgtggcagtcactatcgcc
agcgccattctggcttttccaatggcgtggtatatggcgcgctataccagcgggaaaatg
aaagcgtttttttatattgcggtaatgttgccgatgtgggcgagctacattgttaaagcc
tatgcctggacgttattgctggcaaaagatggcgtggctcagtggtttttacaacatctt
gggctggaaccactgctgactgcgttccttacattacctgcggtgggcggaaatacgctg
tcaacttccgggctggggcgctttctggtgtttctctatatctggttgccgttcatgatc
ctgcccgttcaggcggcgcttgagcgtttgccgccgtcattgttgcaggcgtcggctgat
ctcggcgcacgtccacgacaaacctttcgctatgtggtgctgccgctggcaatcccgggt
attgccgctggctctatctttaccttctcactcacactgggcgattttatcgtcccgcag
ctggttggtcctccaggatattttatcggcaatatggtttattcccagcagggggcgatt
ggcaatatgccgatggcggcggcattcaccctggtgccgattattctcatcgcactgtac
ctggcgttcgtgaaacgtctgggagcgttcgatgcactctga
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