Empedobacter brevis: F0358_04235
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Entry
F0358_04235 CDS
T06196
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ebv
Empedobacter brevis
Pathway
ebv00521
Streptomycin biosynthesis
ebv00523
Polyketide sugar unit biosynthesis
ebv00541
O-Antigen nucleotide sugar biosynthesis
ebv01100
Metabolic pathways
ebv01110
Biosynthesis of secondary metabolites
ebv01250
Biosynthesis of nucleotide sugars
Module
ebv_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ebv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
F0358_04235 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
F0358_04235 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
F0358_04235 (rfbC)
Enzymes [BR:
ebv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
F0358_04235 (rfbC)
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Gene cluster
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Motif
Pfam:
dTDP_sugar_isom
DUF4980
DUF6834_C
Motif
Other DBs
NCBI-ProteinID:
QES91978
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All DBs
Position
complement(893802..894356)
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AA seq
184 aa
AA seq
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MKATETKLKGCFILEPSIFEDSRGYFFESYNEKKMEEILGYKPTFVQDNQSRSSYGVVRG
LHMQAGEHAQAKLVRVIEGTVIDVAVDVRLGSETYGQYVAVELSAENKKQLFIPRGFLHG
FSVVSEGAAFFYKCDNGYNKESEEGVHPLDNDLGIDWQVPMNQMIISDKDQEAQSFKIFK
NKNN
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacagaaaccaagttgaaaggatgctttattttagagccgtctatttttgaa
gattcaagaggttatttttttgagtcatataacgaaaaaaagatggaagaaattttaggt
tataaaccaactttcgtacaagataatcaatctcgttcatcttacggagtcgttcgagga
ttgcatatgcaggctggagaacatgcgcaagcaaaattagtccgtgttatagaaggaact
gtcatagatgtggcagtagacgttcgtctaggttccgagacatatggacagtatgtggca
gtagagttatcggcagagaataaaaagcaattatttattccgagaggttttttgcatggt
ttttcagttgtatctgaaggtgcagcttttttttataaatgcgataacggatacaataaa
gagtcagaggagggcgtacatccattagataatgacttaggaatagactggcaagtacca
atgaatcaaatgattatttcggacaaagatcaagaagctcaatcatttaaaatatttaaa
aataagaacaactaa
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