Xiamenia xianingshaonis: J7S26_04240
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Entry
J7S26_04240 CDS
T08443
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ebz
Xiamenia xianingshaonis
Pathway
ebz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ebz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J7S26_04240 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ebz03019
]
J7S26_04240 (rny)
Messenger RNA biogenesis [BR:
ebz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
J7S26_04240 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KhpA-B_KH
YtxH
ZT_dimer
Neur_chan_memb
Propep_M14
DUF1043
Fzo_mitofusin
SNARE_assoc
FUT8_N_cat
Motif
Other DBs
NCBI-ProteinID:
QTU85120
UniProt:
A0A9E6SV27
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Position
1118285..1119817
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AA seq
510 aa
AA seq
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MPSIVWLIIGLVAGAALGYVIVRYVANASTKKASEEASAMVEDAKRQAETMRREAAIEAK
DQALKLKQEMEAENKERLKEVRSAENRLTQREESLDRRVESLDNRERQISSLQGQLEKRE
RDIVATEAEVGRRLEQVAGMTPEEAKHELLDTIKDEVTHESAAIIREAETRAKAEADKKA
RSILSLAIQRVAADHTAETTVSTIHIPSDDLKGRIIGREGRNIRSFESLTGTNLIIDDTP
ECVSISCFDPVRREIGRVTMENLVADGRIHPARIEEMFGKAEAFVNQRVQEAGEQATFDT
GIHDLHPEIVTTLGRLRYRTSYGQNVLNHSLEVAYLCGVMASELGLDPVPAKRAGLLHDL
GKAVDHEVEGSHAIIGADLARRFGEKADIVHAIEAHHNDVEPSSVLAVLVQAADAISAAR
PGARKETLDAYIKRLEKLEEIANSYAGVDRTYAIQAGREVRVMVHPDKVDEAATTVLAHD
IAQRIENEMQYPGQVKVVVIRESRAVSIAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgatagtctggttgatcatcggcctggtcgccggtgccgccctcggctatgtc
attgtgcgctatgtcgccaacgcttcgaccaagaaggcctcagaagaagcctctgccatg
gtcgaagatgcgaagcggcaggctgaaacgatgcggcgcgaggcggcgatagaggcgaag
gaccaagcgctcaagctgaagcaggagatggaagccgaaaacaaggaacgcctgaaagag
gtgcgctcagccgaaaatcgcctgacccagcgcgaggaatcgctcgaccgccgcgtggaa
tcgctcgacaaccgcgagcggcagatctcgtctttgcaaggccagctggaaaagcgcgag
cgcgacatcgtcgcgacggaagccgaggtgggacgtcggctggagcaggtggcgggcatg
acgccggaagaggcgaagcacgagctgctcgacaccatcaaagacgaggtcacgcacgaa
tcggccgccatcatccgcgaagccgaaacgcgggcgaaggccgaggccgacaagaaggcc
cgctccatcttgagcctggccatccagcgcgtcgccgccgaccacacggcggaaacgacc
gtgtccaccatccacatcccctctgacgacttgaagggccgcatcatcggccgcgagggt
cgcaacatccgctcgttcgaatcgctcaccggcacgaacctcatcatcgacgacacgccc
gaatgcgtgtccatctcctgcttcgacccggtgcgtcgcgagatcggccgtgtgacgatg
gaaaacctcgtcgccgacggacgcatccatccggcccgcatcgaagagatgttcggcaag
gccgaggcgttcgtgaaccagcgcgtgcaggaggcgggcgagcaggccaccttcgacacg
ggcatccacgacctgcatccggagatcgtcaccacgctcgggcggctgcgctaccgcacg
tcctacggccaaaacgtgctgaaccattcgctcgaagtggcctatttgtgcggcgtcatg
gcgtctgaactggggctcgacccagtgccggccaagcgtgccggacttttgcacgacctg
ggcaaggccgtcgaccacgaggttgaaggcagccacgccatcatcggcgccgatctggcc
cgccgcttcggcgagaaggccgacatcgtgcatgccattgaagcgcaccacaacgacgtg
gagccttcgagcgtgctcgcggtgctcgtacaggccgccgacgccatttcggccgctcgt
ccgggcgcccgcaaagaaacgctcgacgcctacatcaagcgcctcgagaagcttgaagag
atcgccaactcctacgcgggcgtcgatcgcacctatgccatccaagccggtcgcgaggtg
cgcgtcatggtgcacccggacaaggtggacgaggccgcgacgaccgtccttgcgcacgac
atcgcccagcgcatcgaaaacgagatgcagtatccgggccaggtgaaggtcgtcgtcatt
cgcgaaagccgcgccgtcagcatcgcgaaatag
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