Pectobacterium atrosepticum SCRI1043: ECA0208
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Entry
ECA0208 CDS
T00186
Symbol
fadB
Name
(GenBank) fatty oxidation complex alpha subunit [includes: enoyl-CoA hydratase; delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase]
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00071
Fatty acid degradation
eca00280
Valine, leucine and isoleucine degradation
eca00310
Lysine degradation
eca00362
Benzoate degradation
eca00380
Tryptophan metabolism
eca00410
beta-Alanine metabolism
eca00640
Propanoate metabolism
eca00650
Butanoate metabolism
eca00907
Pinene, camphor and geraniol degradation
eca00930
Caprolactam degradation
eca01100
Metabolic pathways
eca01110
Biosynthesis of secondary metabolites
eca01120
Microbial metabolism in diverse environments
eca01200
Carbon metabolism
eca01212
Fatty acid metabolism
Module
eca_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ECA0208 (fadB)
00650 Butanoate metabolism
ECA0208 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
ECA0208 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ECA0208 (fadB)
00310 Lysine degradation
ECA0208 (fadB)
00380 Tryptophan metabolism
ECA0208 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ECA0208 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ECA0208 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ECA0208 (fadB)
00930 Caprolactam degradation
ECA0208 (fadB)
Enzymes [BR:
eca01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ECA0208 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ECA0208 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ECA0208 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
ECA0208 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
CAG73127
UniProt:
Q6DAP5
LinkDB
All DBs
Position
complement(233861..236050)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQGESLYLNWLEDGIAELVFSAPGSVNTLDTRTVASLGKALDVLAEQPNLKGLLLRSD
KPAFIVGADITEFLSLFAAPAEKLHEWLVFANSIFNRLEDLPVPTLSAINSYALGGGCEC
VLATDFRLATPDARIGLPETKLGIMPGFGGTVRLPRLLGADSALEIIAAGKDVSAADALK
VGLVQAVVANEKLIPAAIKMLKQAINGELDWLGYRRPKLEALKLNKIEAMMSFTTAKAMV
LQTAGKHYPAPMLAVKTIEAAATMTRDEALQLETQHFVQLARSNEARALVGIFLNDQYVK
GKAKKLVGETPVPQQAAVLGAGIMGGGIAYQSAFKGVPIRMKDINEKPLALGMNEAAKLL
NKQMERGKLDGMKMATILANIHPTLDYAGFERTDIVVEAVVENPKIKASVLAETESHISE
STILASNTSTIPIAVLAAALKRPQNFCGMHFFNPVHRMPLVEIIRGPKTSDSTIASVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAAFSLLLRDGADFREIDNAMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPQRMAKDYRDAIDVLFEHQRFGQKNGQGFYRYQTDSKGKQ
RKEQDDAVDALLKNISQPKKAFSAEEIIARMMIPMINEVARCLEEGIVASPAEADMALVY
GLGFPPFHGGACRYLDTLGSERYVEMAQQLAHLGAIYQVPDGLQQKARSNEGYYPSVAPH
ADVSHGQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctttatcaaggtgaatccctctaccttaactggcttgaggacggcattgccgagctg
gtattttctgcccctggctccgtaaacacgctagatacccgcacggttgccagcctgggt
aaggcgctggacgttctggcggaacagccgaacctgaagggcttactgctgcgatcagac
aaacctgcatttattgtcggtgccgatatcacggaattcctttctctttttgccgcgccg
gccgaaaagctgcatgagtggcttgtcttcgccaacagcattttcaaccgtcttgaggat
ttacccgttcccacgctgtccgcgattaatagctatgcgctgggaggcggatgtgaatgc
gtgctggcgaccgattttcgcttagcgacgccagatgcacgaatcgggttgcctgagact
aaactcggaatcatgccgggctttggcggcacagtcaggctaccgcgtctgttaggtgca
gacagcgcgctggagattatcgccgcaggtaaagacgtcagcgcagccgatgctttaaaa
gtggggctggtgcaggctgttgtcgctaatgaaaaactgattcccgccgccatcaagatg
ctaaagcaggccataaatggcgagctggactggctgggttaccgacgcccgaaacttgag
gcgctgaagctcaataaaattgaagccatgatgagctttaccaccgccaaagcgatggtg
ctacaaaccgcggggaaacattatccagcgccgatgttagcggtaaaaaccatcgaagcc
gccgcaaccatgacacgtgatgaggcattgcagctcgaaacgcagcacttcgttcaactg
gcgcgttcaaatgaagctcgcgccctcgtcggcattttcctcaacgatcaatatgttaaa
ggcaaagcgaagaagctggttggcgagacacctgtaccgcaacaggccgctgtgctgggt
gcgggcattatgggcggcggaattgcctatcaatccgcgttcaaaggcgtgccaattcgg
atgaaggatatcaacgagaagccactcgcgctggggatgaacgaggcagctaagctcctg
aataaacagatggagcgaggcaaactagacggaatgaaaatggcgacgattttggcaaac
attcacccgacgctggattacgccgggtttgaacgtaccgatatcgtcgttgaagctgtg
gtagaaaacccgaaaatcaaagcgagcgtattagcagaaaccgaatcgcacattagcgag
agcacgattctcgcttctaatacctcaacgattccaattgctgtgctggctgcggcgtta
aaacgaccgcaaaatttctgcggtatgcacttctttaacccagtacaccgtatgccgctg
gtcgaaattattcgcggccctaaaactagtgacagtaccatcgccagcgtagtggcctac
gccagcaaaatgggcaagacaccaattgtcgtgaacgactgccctggtttcttcgtgaat
cgcgttctgtttccctactttgcagccttcagtttactactcagagacggtgccgatttc
cgcgagatcgataacgccatggagaagaaattcggttggccgatggggccagcctatctg
ctggacgttgtcggcattgataccgctcaccatgcacaagccgtgatggcagaaggcttt
ccacagcggatggcaaaagactatcgcgatgcgatcgacgtgttgtttgaacatcagcgc
tttgggcagaaaaatggtcagggtttctatcgttatcaaaccgatagcaaagggaagcag
cgtaaagaacaggatgacgccgtagatgcactccttaaaaacatcagccaaccgaaaaaa
gcgttcagcgcagaagagattatcgctcggatgatgatcccgatgattaatgaagtcgcg
cgctgtctggaagaaggtatcgtcgccagccctgccgaagcggacatggcgctggtatat
ggattaggtttccctcccttccacggcggagcctgccgctatttggatacgttgggcagc
gagcgttatgtcgagatggcgcagcagttggctcacctcggcgccatctatcaggtgcct
gacggcttacagcaaaaagccagaagcaatgaaggctattacccatcggtcgcgccacac
gcggacgtttcccacggtcaaccggcatga
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