Pectobacterium atrosepticum SCRI1043: ECA1441
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Entry
ECA1441 CDS
T00186
Symbol
rfbC
Name
(GenBank) dTDP-6-deoxy-D-glucose-3,5 epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
eca
Pectobacterium atrosepticum SCRI1043
Pathway
eca00521
Streptomycin biosynthesis
eca00523
Polyketide sugar unit biosynthesis
eca00541
O-Antigen nucleotide sugar biosynthesis
eca01100
Metabolic pathways
eca01110
Biosynthesis of secondary metabolites
eca01250
Biosynthesis of nucleotide sugars
Module
eca_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
ECA1441 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
ECA1441 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
ECA1441 (rfbC)
Enzymes [BR:
eca01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
ECA1441 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAG74351
UniProt:
Q6D784
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Position
complement(1635668..1636204)
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AA seq
178 aa
AA seq
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MQIIDTAVHGAKIIQPKVFGDARGFFLETFEKRRYQEMLDIDVDFVQDNHSRSSKGVLRG
LHFQKTNPQGKLVRVVRGEVFDVAVDIRQDSPTYGKWYGALLSEENKTQFWLPPGLAHGF
VVLSDIADFEYKCTDYYDPSDEGCLLWNDPDLGIEWPISTPQLSEKDKVGKLFKDLAK
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatcattgatactgctgttcacggcgcaaaaatcattcagccgaaagtattcggt
gatgcgcgaggtttttttctggaaacgtttgaaaagagacgttatcaggagatgctggat
atcgatgtagactttgtccaggataatcattcccgctcaagtaaaggtgtattacgaggt
ctgcatttccagaaaacaaacccgcaggggaaacttgtccgcgttgtacgtggcgaggtt
tttgacgttgcagtagatattcgtcaagattctcctacctacgggaaatggtatggagca
ctcctctctgaagagaacaaaacgcaattttggctccctccggggctagcacatggtttt
gttgtcctctcagatatcgcagatttcgagtacaagtgtacggattattatgaccctagc
gatgagggttgcctattatggaacgatcctgatcttggtatcgaatggccaatatcaacc
ccgcagttatccgagaaagacaaagtaggcaagttattcaaggatctagcaaaatga
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