Pectobacterium atrosepticum SCRI1043: ECA2744
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Entry
ECA2744 CDS
T00186
Name
(GenBank) putative helicase
KO
K19789
DNA repair protein RadD
Organism
eca
Pectobacterium atrosepticum SCRI1043
Brite
KEGG Orthology (KO) [BR:
eca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eca03400
]
ECA2744
DNA repair and recombination proteins [BR:
eca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
ECA2744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
zf-tcix
AAA_30
zinc_ribbon_2
AAA_22
SLFN-g3_helicase
DZR
AAA_16
zf-ribbon_3
AAA
UPF0547
DnaJ_CXXCXGXG
zf-RanBP
Motif
Other DBs
NCBI-ProteinID:
CAG75644
UniProt:
Q6D3K0
LinkDB
All DBs
Position
3084876..3086636
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AA seq
586 aa
AA seq
DB search
MSFTLRPYQREAVSATLDYFRHHTQPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE
LVAQNHAKYCAWDLEADIFAAGLQQRESRGKVVFGSVQSVARNLDQFDNAFSLLIIDECH
RISDDNDSQYQQIIQHLQKTNPQLRLLGLTATPYRLGKGWIYQYHYHGMMRGDERCLFRD
CIYELPLRYMIKHGFLVPPDRLDMPVVQYDFSKLVARSNGLFSEADLNLELKRQQRITPH
IISQVVDYAQTRRGVMIFASTVEHAKEIAALLPAGQAALVSGDTPPAERDALIDAFKQQS
LRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLYPGKADCLILDYAGNP
HDLYTPEVGNSKPHAGSQPVQVFCPECGFANLFWGKTTPDGDIIEHYGRRCQGWEMAENG
QRQQCNFRFRFKVCPHCGAENDIAARRCNQCDEVLVDPDDMLKAALKLKNALVLRCSGMS
FEQGQDAKGEWLKITYHDEEGADVSERFRLHSTAQRHVFLQQFLRVHQRAPGTPFNWQNA
ADVIAQQISLRAPDFVVARKNGRFWQIREKLFDYQGRFRRANELRG
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcacactacggccttaccagcgtgaggctgtttccgccacactcgactatttt
cggcatcatacccaaccggccgtcatcgttttgcccaccggcgcggggaaaagtctggtc
atcgccgaactggcgcggcttgctcgtggtcgtgtgctggtgctcgcccacgtcaaggaa
ctagtcgcgcaaaaccacgccaaatactgcgcctgggatttggaagcggatatattcgcg
gcggggctgcaacagcgagagagcaggggaaaagtggtctttggcagcgtgcagtccgtc
gcacgtaacctcgatcagttcgataacgccttctctctgctgatcatcgatgaatgtcac
cgtatcagcgacgacaatgatagccaatatcaacaaatcatccagcacctgcaaaaaacc
aatccacagctgcggctactcggcctaactgcgacgccctatcggcttggcaaaggctgg
atatatcagtaccactatcacggcatgatgcgtggcgacgagcgttgtttgttccgcgac
tgcatctatgagctaccgctgcgctatatgatcaagcatggctttctggtgccgcctgac
cgactggatatgccagtggtgcaatatgatttcagtaagcttgtcgcccgcagcaacgga
ttattcagcgaagctgacctaaatctcgaacttaaacgccaacagcgcattacgccgcac
atcatcagccaggttgtcgattatgcgcaaacgcgacgcggtgtgatgatttttgcgtct
accgtcgagcatgccaaagaaattgcagcgttgttacccgcaggtcaggctgcactggtc
agcggcgataccccacctgccgagcgtgatgcgttgattgacgcctttaaacagcagtcg
ttgcgatacttggtcaacgtggcggtactgacgaccggttttgatgccccacatgtcgat
cttatcgccattctacgtccgacagagtccgtaagcctctatcagcaaattgtcgggcgc
ggtttacgtttgtatccgggaaaagcagactgtctgatactggattacgcaggtaaccca
cacgacctctacaccccagaagtaggcaacagcaaaccccatgctggcagccagccggtg
caagttttctgccctgagtgtggttttgctaacctgttctggggcaaaaccaccccggat
ggcgatatcatcgaacactatggccgccgctgccaaggctgggaaatggcagaaaacggc
caacgtcagcagtgtaatttccggtttcggtttaaagtctgtccacactgtggggcagaa
aacgacattgccgcacggcgctgcaaccagtgcgacgaggtattagtcgaccccgacgac
atgttgaaagccgcactgaaactgaaaaatgcgctggttttacgctgtagcggcatgagc
ttcgaacaggggcaagatgcaaaaggtgaatggctgaaaataacctaccatgatgaggaa
ggtgctgacgttagcgagcgtttccgcctgcactccaccgcacaacgccacgttttcctg
caacagtttttacgtgttcatcaacgcgcaccgggaacgccatttaactggcagaatgcc
gccgacgtcatcgcacagcagatatctttacgcgcacccgactttgtcgtcgcgcgtaaa
aacgggagattctggcaaatacgtgaaaagctctttgattatcaggggcgctttcgccgc
gccaatgaactccgcggctaa
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