Erigeron canadensis (horseweed): 122580394
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Entry
122580394 CDS
T07610
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122580394
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122580394
04147 Exosome [BR:
ecad04147
]
122580394
04090 CD molecules [BR:
ecad04090
]
122580394
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122580394
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122580394
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122580394
CD molecules [BR:
ecad04090
]
Proteins
122580394
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
Zeta_toxin
AAA_16
AAA_22
RsgA_GTPase
AAA_21
AAA_15
nSTAND1
AAA_23
APS_kinase
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
122580394
NCBI-ProteinID:
XP_043608599
LinkDB
All DBs
Position
8:complement(46962276..46970855)
Genome browser
AA seq
1253 aa
AA seq
DB search
MSSSLSVEDGGGGATKDHDHDHHKKETPKRVSMLKLFTFADSYDYLLMFLGSVGACIHGA
SVPVFFIFFGKLINIIGLAYLFPKEASHKVAKYSLDFVYLSVVILFSSWVEVACWMHSGE
RQAAKMRMAYLKSMLSQDISLFDTEASTGEVISAITSDIIVVQDAISEKVGNFMHYISRF
LSGFIIGFVRVWQISLVTLSIVPAIAIAGGVYAYIATGLIARVRKSYVKAGEIAEEVIGN
VRTVQAFSGEEKAVNSYIEALSNTYKYGKKAGLAKGLGLGTLHFVLFLSWSLLVWYTSIV
VHKNIANGGDSFTTMLNVVIAGLSLGQAAPDVSAFIRAKSAAYPIFEMIERRTVTKTSAK
TGRTLAKLDGHIRFDDVCFSYPSRPDVMIFDNLRLDIPSGKIVALVGGSGSGKSTVISLI
ERFYEPLSGQILLDGNNICELDIKWLRNQIGLVNQEPALFATTIRDNILYGKDSATHEEI
THAAKLSEAITFINNLPERFETQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSA
LDTESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADIIAVVHQGKIAETGSHEELMARPD
SAYASLVQLQETASLHRAPSRVASMGRPSSIRYSRELSRTTTRSIGASFHSDRESVGKLG
VEGVEYIKPPRISSKRLYSMIQPDWVYGLTGTIGALVAGSCMPLFALGISEALVAYYMDW
ETTQREVKKIALLFCFGACVSITVYSITHLCFGIMAERLTLRVRQKMFSAILRNEIGWFD
DMNNTSSMLASRLESDATLLRTVVVDRTTILIQNLGLICTSFFIAFLLNWRLTLIVMAMY
PLIISGHISEKMFMKGYGGDLNKAYLKANMLAGEAVSNIRTVAAFCSENKVLDLYAQELV
GPSKQSFNRGQIAGLFYGVSQFFIFSSYGLALWYGSVLMERGLCGFKSVMKSFMILIVTA
LAMGETLAMAPDLLKGNQMVASVFEVLDRRTQVVSDVGEEITKVDGTIELKGVNFSYPSR
PDILIFKDFDLKIRAGKTMALVGQSGSGKSSVLSLILRFYDPTSGKVLIDGKDIKKLKLK
SLRSHIGLVQQEPALFATSIFENILYGKEGASEGEVIEAAKLANAHTFISALPEGYSTKV
GERGIQLSGGQKQRVAIARAVLKNPAILLLDEATSALDVESERVVQQALDRLMKNRTSVV
VAHRLSTIKNADEISVIQNGKIVEKGTHSSLEHENGPYSKLINLQQQEHHHRK
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgagttcatcactctctgttgaagatggtggtggtggtgccaccaaagatcatgatcat
gatcatcataagaaagaaacaccaaaaagagtttcaatgttaaaacttttcacatttgca
gattcatatgattatcttcttatgtttcttggttctgttggagcatgcattcatggtgca
tctgttcctgttttctttatattttttggcaagttgattaatattattggacttgcatat
ctttttcctaaagaagcttctcataaagttgcaaagtattctttggattttgtgtatctt
agtgtggtgatactcttttcttcatgggttgaggtggcttgttggatgcatagtggagaa
agacaagcagcaaagatgagaatggcttatttgaaatcaatgttaagccaagatataagc
ctttttgacactgaagcttcaactggagaagtcatttctgcaattactagtgatatcatt
gttgttcaagatgccatttctgagaaggtagggaatttcatgcactacatcagcagattc
ctatccggattcattataggattcgttagagtttggcagataagtttggtgactttgtca
atcgtacctgcgattgcaatcgctggtggtgtctatgcttacatcgcaacgggcctcatt
gcccgagtccgaaaatcatacgtcaaagcgggtgaaatcgctgaagaggtaattggaaat
gtaaggacagtgcaagcattttctggagaagagaaggcagtaaattcttacattgaagct
ctgtcaaacacttacaagtacggcaaaaaagctggtctagccaaaggcttgggcctggga
actttgcattttgttctcttcctctcttggtcattgctcgtctggtataccagcatcgtc
gtccacaaaaacattgctaatggcggcgactccttcaccaccatgctcaatgttgtcatt
gctggcctgtctctcgggcaggctgcaccggacgtcagcgcattcattcgggctaaatca
gcagcatatcccatctttgaaatgatagagaggagaacagtaaccaaaaccagtgccaaa
acaggccgtacacttgccaaattggatggtcacatacgctttgatgatgtgtgtttcagt
tacccatctagaccagatgtgatgatctttgacaatcttcgtcttgatataccttctggg
aaaattgtggcccttgttggtggtagcggttcggggaagagtacagttatatcactgata
gaacgattttacgagcctctctcgggccagatcctgttagatgggaacaatatatgtgag
cttgacataaaatggctaagaaaccagattgggctggtcaatcaagaaccagctctcttt
gctactacgataagggataatattttatatgggaaggattcggctactcatgaagagatc
acacacgctgcaaagttatccgaggcgattacttttattaacaatctcccggaaagattt
gaaacgcaggtgggtgaacgtgggatacaactctcagggggacaaaagcaacgaattgca
atttcacgggcgatcgtgaaaaacccatcaattttattgttagatgaagccactagcgcc
cttgacactgaatctgaaaagagtgtccaagaggcacttgatcgtgtgatggtgggaagg
acaaccgtagttgtagcccatcggctttccaccattagaaatgcagacattatagctgtt
gttcaccaagggaagatagcggaaactgggagccatgaagagctcatggcccgacctgat
agtgcctatgcatcgctcgttcaacttcaagaaacagcctctttgcatcgtgcaccgtcc
cgtgttgcttctatgggaagaccttccagcataagatattctcgcgaactatcccgcacg
actacaaggagcataggagctagttttcattctgatagagaatctgtaggcaagctcggt
gttgaaggtgttgaatacattaagccaccacgcatttcctcaaaaagattatactcgatg
attcagcctgactgggtttatggcttaaccggtaccataggagcactcgtagccggatcc
tgtatgcctctctttgctcttgggattagtgaagccctcgtggcttattacatggactgg
gaaaccacacagcgtgaggtcaaaaagattgcccttctcttttgttttggtgcttgtgtg
agtatcactgtttactccatcactcatttatgcttcgggatcatggcagaaaggctcact
cttcgtgttcgtcaaaagatgttttcagctattttgcgaaacgagattggatggttcgac
gacatgaacaacacaagctcaatgctcgcttcccgtttagaaagtgatgcaacgttacta
agaaccgtagttgttgaccgaacaacaatactgatacagaacttgggcttaatctgcact
tcattcttcattgccttcctcttaaattggaggctgacactcattgtaatggctatgtat
ccgttgatcatcagtggtcacattagcgagaaaatgttcatgaaagggtatggtggtgac
ttgaacaaagcttatcttaaagctaatatgcttgctggtgaggcagttagtaacataaga
accgttgcagcattttgctctgaaaataaagtgctcgatctttatgcccaagagcttgtt
ggaccttctaaacagtcatttaatcgagggcagattgcaggattattctacggtgtctct
cagttcttcattttctcatcttatggtcttgcattgtggtatggttctgtcttgatggag
agagggttgtgtgggttcaaatcagtaatgaaatcatttatgattttaattgtgaccgcg
ttagccatgggcgaaacattagcaatggcaccagatttattaaaaggaaaccagatggtt
gcttcggtatttgaggttctcgacaggagaacacaagttgtgagtgacgttggtgaggaa
atcacaaaagttgatgggacaattgaactgaaaggtgtcaatttcagctacccgtcaaga
cccgacatcttgattttcaaagattttgatctaaagattcgagcaggaaagaccatggca
ttggtggggcaaagtggttccgggaagagctctgttctctctcttattcttcggttctac
gatccaacctccgggaaagtgctgattgatggaaaggacattaagaagctgaagctaaag
tctcttagaagtcatatcgggctagtccagcaagaaccggctctatttgcaacctcgata
tttgaaaacatactctatgggaaagaaggagcctcagaaggtgaagtgattgaagccgct
aagcttgcaaacgcacatacattcataagtgccctcccggaaggttactcaacaaaagtt
ggtgagagaggaattcaactttcaggcggacaaaagcagagggtagctatagcacgagct
gtgctgaagaatcctgccatattactattggatgaagccaccagtgcgcttgatgtggag
tctgagcgtgtggttcaacaggctttagaccggctaatgaagaaccgaaccagtgtcgtg
gttgcacaccggctatcaaccataaagaatgcggatgagatatcagtgatccaaaatgga
aaaattgtggagaaagggacccattcaagtcttgagcatgagaacgggccatattcaaag
ctaataaacttacagcagcaagaacatcaccaccgtaaataa
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integrated database retrieval system
