Erigeron canadensis (horseweed): 122580522
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Entry
122580522 CDS
T07610
Name
(RefSeq) transcription initiation factor TFIID subunit 8-like
KO
K14649
transcription initiation factor TFIID subunit 8
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122580522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecad03021
]
122580522
Transcription machinery [BR:
ecad03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122580522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromo_TP
DUF2153
Motif
Other DBs
NCBI-GeneID:
122580522
NCBI-ProteinID:
XP_043608731
LinkDB
All DBs
Position
8:815536..816255
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AA seq
239 aa
AA seq
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MKTRKKTTRTLSSQSQLNLFQSSDFHTAVAKIAVTQICKSAGYAAAQTTALETLTNITVR
YLQSIAKSAVISAVSTGRTECNLYDVIRGFEDLHYDVGFTGNENPNKRLYRLADSSILLD
IMKFVYRNREIPFAKPLPRGCHVDSQCLFRDSEKVLKHVPRWLPDFPVIIEKEEKAVVAD
VENEGEKIMKKIVVGDLAVKREKVNFKINERSSGRNSKNEIKVESGIRKGVKRISCHND
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgaggaagaagacaacaagaactttatcatcacaatctcaactcaatcttttc
caatcatcggattttcacaccgccgtcgctaaaatcgccgtcacgcaaatctgcaaatcc
gctggatacgccgccgctcaaactaccgcactcgaaaccctaactaacatcaccgtgagg
taccttcaatcaatagcgaaatccgccgtcatctccgccgtatccactggccgtacagaa
tgcaacctgtatgacgtaatccgtggatttgaagacttacattatgacgttggatttacc
ggtaacgaaaatcctaataaacggttatatagacttgctgactcatcgattcttctagat
attatgaagtttgtgtatcggaatcgcgagattccttttgcgaagccgttgccacgtgga
tgtcacgtggattcgcagtgtttgtttcgtgacagtgagaaagtattgaagcatgttcct
agatggttaccggattttccggtaattattgaaaaagaagaaaaagcggttgtggctgac
gtggaaaatgagggtgaaaaaattatgaagaaaatagttgtgggcgacttagcggtaaaa
agggaaaaagtaaattttaagatcaatgaaaggagtagtggtagaaatagtaaaaatgag
attaaagttgaatctggaattcgtaaaggtgtaaaaaggatttcatgccataatgattaa
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