Erigeron canadensis (horseweed): 122581241
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Entry
122581241 CDS
T07610
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00280
Valine, leucine and isoleucine degradation
ecad01100
Metabolic pathways
Module
ecad_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
122581241
Enzymes [BR:
ecad01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
122581241
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
HlyD_D23
HlyD_3
ATPgrasp_ST
ATP-grasp_3
ATP-grasp_4
Por_Secre_tail
DUF2118
NQRA
Motif
Other DBs
NCBI-GeneID:
122581241
NCBI-ProteinID:
XP_043609357
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All DBs
Position
9:7436815..7446556
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AA seq
736 aa
AA seq
DB search
MSLTSLLYRKLRRTSNHHNFTFIFTHIRSASSATHNSRKIEKILIANRGEIACRIMRTAK
RLGIQTVAVYSDADRYSLHVKSADEAVCIGPAPARLSYLSSSSIIEAAARTGAQAIHPGY
GFLSENADFAQLCENEGFTFVGPPASAIREMGDKSASKRIMGAAGVPLVPGYHGHEQDID
VMKSEADKIGYPILIKPTHGGGGKGMRIVENPKEFVDSFLGAQREAAASFGVNTILLEKY
ITRPRHIEVQVFGDKKGNVVYLYERDCSVQRRHQKIIEEAPAPDIISDFRSRLGQAAVSA
AKAVGYHNAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGESL
PLDQAQIPILGHAFEARIYAENVPRGFLPATGVLQHYRPVPVSESVRVETGVEEGDTVSM
HYDPMIAKLVVWGENRASALVKLKDSLSKFQVAGLPTNIEFLYKLANHKAFANGELETHF
IDQFKDDLFVTPNDSVSAEAAYDAATYSAALVAACICEKEHSLLKKSPPGGLSLWYTHPP
YRLNHHATTTIKLEWENEYRDNNSEHLSLSISHLPNGNYLVKMGEHSSPALEVTVTHMGD
HDFRVEADGLSKNVNLASYITDKTEHIHIWHGSNHHHFKQKVGLDLLDNLETHQHRNHES
ASHPPGTVVAPMSGLVVKVLVKDGMDVEEGQPMLVMEAMKMEHVIKAPASGLVSGLQVTP
GQQVSDNSVLFNIKAA
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgtcactaacctccctactttaccggaaacttcgccggacctctaaccaccacaatttc
accttcattttcacacacatccgctccgcatcttccgccacacataacagccgtaaaatc
gaaaaaatacttatagcaaatagaggcgaaatcgcgtgccggattatgcggacagccaaa
cggttaggtatacaaacagttgctgtatatagtgatgctgatagatatagtcttcatgtt
aaatcagctgatgaagctgtctgtattggtccggcgccggcgagattaagttatttgagt
tcgagttcgattattgaagctgcggctcgtaccggcgctcaggctatacatccaggctac
ggtttcctttcagaaaatgcggacttcgctcaactttgtgaaaatgagggattcactttt
gttggaccccctgcatctgcaatacgtgaaatgggtgataaaagtgcatcaaagagaata
atgggtgcagcaggtgtgccacttgtgcctgggtatcatggtcatgaacaagatatcgat
gtcatgaagtcagaagcagacaagataggataccctattttaataaagcccacccatgga
ggtgggggaaagggtatgaggattgtggaaaatccaaaagaatttgttgactcattttta
ggagcacaacgagaggctgctgcttcttttggcgtaaacacaattttgttggagaaatat
ataacaaggccaaggcacatagaagttcaggtatttggggacaagaagggcaatgttgta
tacttgtacgagagagattgcagtgtgcaaagaagacaccaaaagataattgaagaagcc
ccagctccagatatcattagcgacttccgatctcgcttgggtcaagctgccgtatctgct
gccaaggcagttggctatcacaatgctggcacagttgagttcattgttgatactctctct
ggggaattttattttatggagatgaacacacgtcttcaggttgaacatcctgtgactgag
atgattgttggtcaagatcttgtagagtggcaaattcgtgttgctaatggagaatcgctc
ccccttgatcaagcacagattcctatattaggccatgctttcgaagcccgaatatatgcc
gaaaatgtgccaagaggatttctgcccgcaactggtgttcttcaacactaccgtcccgtt
ccagtctcagaaagcgttcgagttgaaacgggagttgaagaaggggacactgtaagcatg
cattatgaccctatgattgctaagcttgtagtgtggggagagaatcgtgcttcagcatta
gttaagttgaaggattctttatccaagtttcaggttgcaggtttgcccacaaatattgag
ttcctctacaaacttgctaaccacaaggcatttgcaaatggtgaacttgaaactcatttt
attgatcaattcaaagatgacttattcgtgacaccaaatgattcagtatcagcagaggca
gcatatgatgctgctacatacagtgcagctttagtagctgcttgcatttgtgaaaaggag
cattcattattgaaaaaaagccctcctggaggattgtctctgtggtatacacatcctcca
tatagactcaatcatcatgctacaactacaataaaattagagtgggagaatgaatatcgt
gataacaactcagagcacctatctctttccatcagtcatctgccaaatggaaattacctc
gtaaagatgggcgaacacagctctcctgctcttgaagtcacagtaacacacatgggtgac
catgatttcagagttgaggctgatggtctaagcaagaatgtgaatctggccagttatatt
acggataagactgagcacattcacatttggcatggttcaaaccatcatcactttaagcaa
aaagtaggacttgatttattggataaccttgaaacccatcaacatcgaaatcatgaatcg
gcatcacatcctcctgggacggttgttgccccgatgtctggtttagtggttaaggttctg
gtcaaggatggaatggacgtcgaagaaggtcaacctatgttggttatggaagcaatgaaa
atggagcatgtgatcaaggcaccagcctctggcctcgtaagtgggcttcaagtcactcct
ggccaacaagtttctgacaatagtgttctattcaatatcaaggctgcataa
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