Erigeron canadensis (horseweed): 122587359
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Entry
122587359 CDS
T07610
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
ecad
Erigeron canadensis (horseweed)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
122587359
NCBI-ProteinID:
XP_043615438
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All DBs
Position
2:36134223..36144516
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AA seq
1421 aa
AA seq
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MTSLSPSSSITPKSKTLTLNSTTLFLKSPQPLYPPPPQSSFSILSSNSNLPPFPPDFPLP
KLIPHTKFIVDGFRFSGDHSVSYFLSHFHSDHYTGLNSTWSKGIIYCSHVTAKLLVQILK
VSEAFVVSLPLSQTVLVDRCEVTLVDANHCPGAVQFLFKIPVGEGDSYERYVHTGDFRFS
SSMVLDRNLGEFVGADAVFLDTTYCNPKYVFPLQQESIDYVVSVINKYKGENEGERKSIL
FLIATYVIGKEKILVEVSRRCGRKIYVDDKKMGILQTLGFGDDGVFTDKECESDVHVIGW
NVLGETWPYFRPNFVKMKEVMEARGYSKVVGFVPTGWTYEVKRNKFAMRTKDQFEIHLVP
YSEHSNYEELREYVKFLRPKRVIPTVGVDVEKFDGKHVNKMLKHFAGLVDEMAIKQDFLM
GFHRGSRDSNRLKEKLPGSGKESALAEVDAQNDSSPVCDQKEEYGSRDLVLMTDKETDEV
IEELRDCLPSWVTRDQMMDLISRSGKNVVEAVSNFYEHETEYHEQVITSTSASASQDSSI
DILKEVMANASSTSVSIKSFTKGFSSPLTPVKTLKRSKDTSSSKRKKPSTIKQPSKTSIS
PNQKRITNDSKSGKKPKLTSECEPKQYTITKFFNKLSPMVSQVSSMGTLPEQSDNDDNSL
PSDAIGHYKDDVDQFIQIVDGSESLRDYATTILQETKGDINKALDLYYTNSIDQQNETKK
SLAQGSCSVKAYISGQDTKVLDRNNCEKPASKQQIESLTPQPPAGNVASDLVSLPLEKYS
PTDHACWKDGQPAPYLHIARTFSLLEDKKGKIRATSMLCNMFRSLLILSPEDVLPAVYLC
INKIAPEHENMELNIGGSVVTAALEEACGTNKSKIRDLYNSLGDLGDVAQLCRQTQKLLA
PPAPLSIRGVFSVLREISVQTGSGSTMRKRNLIVNLMRSCREMEIKFIVRTLVRNLRIGA
MMKTVLPALAHAIVMNSSDGKTMENLKEKLQGLSAAVIEAYNMLPNMDLLIPSIMDKGVK
FSSATLSVVPSIPIKPMLAKITNGIPQVLKDFQGKAFTCEFKYDGQRAQIHKLADGSIRV
FSRKGDETTSRFPDVIRTINELCKADIITFIIDAEVVAVDRKKGTKLLSFQELSSRDRGG
KNSVIAVDNIKVDVCVFAFDVMFANGEQLLDLPLRQRRKYLKDLFGDEKTGYFEYAREIT
VDMDDAYVENEATVTKMKQFFDDAFHSSCEGIMVKSLDIKAGYIPSERSDSWLKVKRDYI
EGLNDSLDLVPIGAWFGNGRKAGWYSPFLMACYDPDTEEYQSVCRVMSGFSDSFYIEMKE
FFIDNKILPKNEKPPYYQTGEEPDMWFTPELVWEIRGADFTISPAHHAAIGLVHPSRGIS
VRFPRFIRSRPDKNTSDCTTATDIAELFHMQTRKMDVPGGK
NT seq
4266 nt
NT seq
+upstream
nt +downstream
nt
atgacatcattatcaccatcatcatcaataacccccaaatccaaaaccctaaccctaaat
tccacaactttattcctaaaatcaccgcaaccgctatatccgccaccgcctcagtcatca
ttttcaatactatcctctaactccaacctccctccatttccacctgatttccctctccct
aaactcattccccataccaaattcatcgtagacggtttccgcttttcaggtgatcactcg
gtttcctatttcctgtcacatttccactccgatcactacaccggtctcaattccacttgg
tccaaaggtataatttactgttcacatgttactgctaaactacttgttcaaatacttaag
gttagtgaagcgtttgtcgtgtcgctgccgttgtcgcagacggttttggttgacagatgt
gaggttacgttagttgacgctaatcattgtcctggtgcggtgcagtttttgtttaaaata
ccggttggggagggggatagttatgagaggtatgtgcatactggtgactttaggtttagt
agttcaatggttttggatcgtaatctgggtgagtttgttggtgcggatgctgtttttttg
gatacgacttattgtaacccgaaatatgtgtttcctttgcaacaggagtctattgattat
gttgttagtgtgattaataagtataagggtgagaatgagggtgaaaggaagtcaattttg
tttcttattgcgacttatgttattgggaaagagaagattttggttgaggtttcgcgtagg
tgtggtaggaagatatatgttgacgataaaaagatggggattttgcagaccttgggtttt
ggggatgatggggtgtttactgataaggagtgtgagagtgatgttcatgtgattgggtgg
aatgtgttaggtgagacttggccgtattttaggccgaattttgtgaagatgaaggaggtt
atggaagctagaggatattctaaggtggtggggtttgtgcccactggctggacttatgaa
gtgaagcgtaacaagtttgctatgaggacgaaggatcagtttgagatacatttagtgccg
tacagtgagcattcgaattatgaagagcttagagagtatgtgaaatttttaagacctaaa
cgtgttattccaactgtaggcgtggatgttgagaaatttgatgggaagcatgtgaataaa
atgctgaagcattttgctggattggttgatgaaatggctatcaagcaggattttttgatg
ggatttcatcgtgggtcccgggattcaaacaggctaaaggaaaagttgccgggttcggga
aaagagtcggctcttgctgaagtagatgctcaaaatgattccagcccagtttgtgatcag
aaagaggaatatggttcgagggatttggtgctgatgacggacaaggaaacggatgaagtt
attgaggaacttcgtgattgcttgccttcttgggttactagagatcagatgatggatctt
attagtagatcaggaaagaacgttgttgaagcagtttctaatttttatgaacatgaaact
gaatatcacgagcaggtcattactagtacatctgcttctgcatcgcaagacagctcaatt
gatattctcaaggaggtcatggccaatgcttcatccacctctgtgtccattaaaagcttt
actaaaggcttttcgtcacctttaactcctgttaaaactttgaaaagaagtaaggacact
tcttcaagtaaaaggaaaaaaccatctaccattaaacaaccgagtaagaccagtatttct
cctaaccaaaagcgaattactaatgatagcaaatcaggcaagaagccaaaattaacttcg
gaatgtgaaccaaagcaatacacgatcactaaattcttcaataagctttcacctatggtt
tctcaagtttctagcatgggaactttgcctgaacaatctgacaatgatgacaactcgctg
cctagtgatgcgattgggcattacaaagatgatgtagatcagtttatacaaatcgttgat
ggcagcgagtcattgcgtgactatgctacaactattttacaggagacaaagggagatatt
aataaggctcttgacctgtattacacaaactccatagatcaacaaaatgaaacaaaaaag
agtttagcccagggtagctgttcagttaaagcttatatctctggtcaagacactaaagta
ctagatagaaataattgtgaaaagcccgcgtccaagcaacaaatagaatctttgacacct
caaccaccagctggaaatgttgcttctgatcttgtatcactaccacttgagaagtattct
ccgacagaccatgcctgctggaaagatggacagcctgctccctatctacacattgccagg
acattcagcctgctggaggacaaaaaaggaaagattagagctacatctatgctatgcaat
atgtttaggagcttgttaattttgtcaccagaggatgtgctgccggccgtgtacctatgc
ataaacaagattgcacctgaacatgaaaatatggaactaaacattggtggaagtgtcgtc
acggcagcattggaagaggcatgtgggaccaacaaatcaaagattcgggatttgtacaac
agcttaggtgatcttggtgatgttgctcaactttgccgccagacacaaaagctacttgca
cccccagccccactctcaatccgtggtgttttttctgtgcttcgggagataagtgtacaa
acaggtagcggaagtaccatgcgaaagagaaaccttattgttaatctaatgagatcttgt
agagaaatggagatcaagtttatagttagaaccttggttaggaatttgagaatcggggcc
atgatgaaaactgtcctgcctgcattagcgcacgccatcgttatgaactctagcgatgga
aaaaccatggaaaatctgaaagaaaagcttcagggtctatctgcagcagttattgaagca
tataacatgctcccaaatatggacctgctcattccttccatcatggataagggggtgaaa
ttttcttcagcaacattgtcagtggttcccagcataccaattaagccaatgctggcgaaa
attactaatggaatccctcaagtgttgaaagattttcaaggaaaagcatttacttgtgaa
tttaaatatgatggtcagcgtgcacaaattcacaaattagctgatggatctatacgcgtg
ttttcacgaaagggggacgaaacaacatctagatttcctgatgttataagaacaataaat
gagctttgcaaagctgatattattacttttataattgatgccgaggtggttgctgttgat
agaaaaaagggtaccaagcttttatcatttcaagaactatcttcacgtgacagaggaggc
aaaaattcagtaattgcagtagataacataaaggttgatgtatgtgtcttcgcatttgat
gtcatgtttgctaatggagaacaactattggatttacctctacgccaaagaagaaaatat
ttgaaagatttgtttggtgatgagaagacaggatatttcgaatatgcacgggaaataact
gtggatatggatgatgcctacgtggaaaatgaagctacagtaactaagatgaagcaattc
tttgacgatgctttccattcttcatgtgaaggaatcatggttaaatctcttgacattaaa
gctggttatatcccatcagagcgttcggattcttggttaaaggtcaagcgagattatata
gaaggtttaaatgattccctggacttggttcctatcggagcctggtttgggaatggaagg
aaggctggatggtacagcccatttctcatggcatgctatgaccctgacacagaagaatat
cagagtgtttgccgtgtgatgtctgggttctctgattctttctatatagagatgaaagag
ttcttcatagacaacaagatactacctaagaatgagaaaccaccctattatcaaacaggc
gaggagcctgatatgtggtttactcctgaacttgtttgggagatacgaggagccgatttc
accatatccccggctcaccatgctgctattggtttagtacacccttcacgtggcatttca
gtcagattcccgagattcatccgatcccgcccagataaaaataccagtgattgtaccaca
gccacggatatagccgaattgtttcatatgcaaacccggaagatggacgttccaggtggc
aagtga
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