Erigeron canadensis (horseweed): 122588814
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Entry
122588814 CDS
T07610
Name
(RefSeq) ABC transporter B family member 13-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122588814
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122588814
04147 Exosome [BR:
ecad04147
]
122588814
04090 CD molecules [BR:
ecad04090
]
122588814
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122588814
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122588814
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122588814
CD molecules [BR:
ecad04090
]
Proteins
122588814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_21
AAA_29
Zeta_toxin
RsgA_GTPase
AAA_22
AAA_16
nSTAND1
APS_kinase
Motif
Other DBs
NCBI-GeneID:
122588814
NCBI-ProteinID:
XP_043616956
LinkDB
All DBs
Position
2:complement(46645148..46653167)
Genome browser
AA seq
1083 aa
AA seq
DB search
MAHFVHHLCTFISGYIVGFRKSWKISLAILAVTPLTMFCGIAYKAVYVGLATKEMNSYKK
AGGVAEQAISSIRTVFSFVAEQNLADKYDALLVESVPVGKKLGFAKGVGIGVIYLVTYGT
WALAFWYGSILISKDEISGGKAIACFFGVNVGGRGLALSLSYFAQFAQGTVAASRVFQVI
DRIPAIDPYSTMGRRLSSGHGKVEFKNVSFAYPSRPTIPILNSLNLVVPSQRTLALVGAS
GAGKSTVFALLERFYDPLEGVVTLDGHDIRTLQVKWLRSQMSMVGQEPVLFADTILVNIM
MGKENATKKEAITACVAANAHKFISSLPDGYDTQVGDRGTQLSGGQKQRIALARAMIQDP
KILLLDEPTSALDPESETLVQQAIDKISRGRTTMVIAHRLATVRNADKIVVMERGSVIEI
GNHQQLMKTKGAYFALIQLASEAVSSNPKSGNGMGRKHETSSAQDLLKSNHVHEISRSEY
MKSVQEEDQEETRKEIKPKSYRISMVWKLQKPEGGMLFIGILLGMVAGAILSIFPLVLGQ
GLNVYFKSDKSTMKSDIRVLCLILVGLGFTIILAMTGQQGFCGWAGSNLTKRVRNLLFRS
ILKQEPGWFDYDENSTGILVSRLSNDCISFRSVLADRYSVLFMSLSTAAVGIGISFFLQW
RLALLATLLTPFTLGASYFNLLINIGPKLDNASYDKATRIASGAVSNIRTVATFATQDKI
VNSFEQSLSNPKATSVKRSQITGIALGFSQGAMYGAYTVILLFGAYLVKEGHTKFGDVYK
IFLILVLSSFSVGQLAGLAPDTSKASTAIPAVYDIISRTPLIRGKGRKIEGSKPIDVEFK
TVTFSYPSRPHVMVLKDFSLKVKGGTMVAVVGSSGSGKSTLIWLTQRFYDPIKGKVLMGG
IDLRELDLKWLRSQTALVGQEPALFAGSIGENIAFGNLNASFAEIEEAAKEAYIHSFICG
LPKGYETEVGQSGVQLSGGQKQRIAIARAIVKRSRVLLLDEASSALDLESEKNVQEAFRK
ITKRATTIVVAHRLSTIREANVIAVVQDGKLTEYGSHDRLMTSHHDGVYASLVRAETEAN
AFA
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcacattttgttcatcatctttgtactttcatcagtggctacattgttggattcagg
aagtcttggaagatctctttggcaattcttgcggtcactcctttaacaatgttctgcggc
atagcttataaggcagtttatgtcggcttggctacaaaagaaatgaattcttacaagaaa
gctggtggtgtagcagaacaagctataagttcaatcagaactgtattttcctttgtagca
gagcaaaatttagcagataaatatgatgcattattggtagagtctgtgcctgtgggaaaa
aaacttggttttgcaaagggcgtcggtataggtgttatatatttggttacttatgggacc
tgggcattggctttttggtatggatcaattttgatatcaaaagatgaaatatctggtggt
aaagccattgcttgtttctttggggtcaatgttggtgggaggggtttggcattatcactc
tcatattttgctcaatttgcacaagggactgtagcagccagtagagtgtttcaagttatt
gacagaattccagcaatagacccttattctacgatggggagaagactctcaagtggacat
ggaaaagtcgagtttaaaaatgtttcttttgcttatccatctcgccccactattccaatt
cttaactccctcaacttggtggttccatctcaaagaacattagcactagttggtgcaagc
ggtgctggaaagtcaactgtttttgctcttttagagaggttctacgatcctcttgagggt
gttgtaacattggatggccatgatataaggacgttgcaagtgaaatggctaagaagtcaa
atgagcatggtgggtcaagagccggttctctttgcagacacaattcttgtaaacataatg
atggggaaagagaatgcaaccaagaaagaggctatcaccgcctgtgttgctgcaaatgca
cacaaattcataagcagtttaccagatggttatgatacacaggtcggtgatagaggaacc
caactctctggtggtcaaaaacagcgcattgcgttggctcgagccatgatccaagacccc
aagatccttttgttagacgagcccacaagtgcactagaccccgagtctgagacgctcgtc
cagcaagctattgataagatttcgagaggtagaaccaccatggtgattgctcataggctg
gcaactgtaagaaacgctgacaagattgttgtgatggaacgaggatctgttattgaaatt
gggaaccatcaacaactaatgaaaacgaaaggagcctactttgctctcatccagcttgcg
tctgaagctgtgtcatcaaatcctaaatctggaaatggaatgggaagaaaacatgaaact
tcaagtgctcaagatcttttaaaatcaaaccatgtgcacgagatatcaaggtcagagtac
atgaaatccgtccaagaggaagaccaagaagaaacaagaaaagaaatcaaaccaaaatca
tacaggatttccatggtatggaaactacaaaaaccagagggcggaatgttgtttatagga
atacttttaggtatggtagcgggtgcaattctctccatttttccgttggttttaggccaa
ggtcttaacgtctacttcaagtccgacaagtcaacgatgaaaagtgatattcgggtcctc
tgtttgattctggttggacttgggttcacgattattcttgccatgacaggtcaacaaggt
ttctgtggttgggctggttcaaacctcaccaagagagttcgcaaccttctctttcggtct
attctgaaacaagagccagggtggttcgactatgatgaaaactcaaccgggatacttgtt
tcaaggctatccaacgactgtataagtttcaggtcagtcttggccgatagatactcggtt
ttatttatgagtttgagcacagctgctgtgggaataggcatttcattctttctccaatgg
aggttagcccttttggctacccttctcactccttttacacttggggctagctactttaac
ttgctcatcaacattggaccaaagttagacaatgcttcttatgacaaagccaccagaatc
gcttctggtgcggtatcaaacattagaacggttgcaacttttgcaactcaagataagatt
gttaattcttttgaacaatctttatcgaacccaaaagcgacatctgtaaaacgatcacaa
atcacagggatagcattagggttctctcaaggtgcaatgtatggagcttatactgtaatt
ctattgttcggggcttaccttgtaaaagaaggccacacgaagttcggggatgtttacaag
atcttcttgattcttgttttgagctcgttttcagtggggcaattggcaggtcttgctcca
gacacttccaaagcctctactgcaattcctgccgtatacgatatcattagccgcactcca
ttgattcgtgggaaaggaagaaagattgaaggctcaaagcctattgatgtagagttcaag
acggttactttttcgtatccttctcggcctcatgtgatggtgttgaaggattttagcctc
aaggtaaaaggcggaaccatggtggcggtggtcgggagcagtggctcggggaaatccaca
ttgatatggctgacacaaaggttttacgatccgataaaaggtaaggtattaatgggagga
atcgacttgagggagcttgatttgaaatggctgcgatctcaaacagctttggtgggtcaa
gagcctgcattgtttgctggtagcattggagaaaacattgcattcggaaaccttaacgct
tcatttgctgagattgaagaagctgctaaagaagcttacattcatagtttcatttgtggc
ctccccaaaggctatgaaactgaggtgggtcagagtggggttcagctatcaggaggtcaa
aaacaaagaatagcaatcgcaagagcaatagtgaagagatcgagagtattgctactagat
gaagcaagtagtgcactggatttggaatctgagaagaacgttcaagaagcgtttaggaag
ataacaaaacgtgccacgaccatcgtggtggctcaccgcctgtcaaccatccgagaagcc
aacgtgatagcggtggtccaagatgggaaactgaccgagtatggaagccatgataggctc
atgacttcacatcatgatggtgtttatgccagtcttgttcgtgctgaaacagaagcaaat
gcatttgcttga
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