Erigeron canadensis (horseweed): 122589372
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Entry
122589372 CDS
T07610
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122589372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122589372
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122589372
DNA repair and recombination proteins [BR:
ecad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122589372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
DUF5462
Transposase_24
Motif
Other DBs
NCBI-GeneID:
122589372
NCBI-ProteinID:
XP_043617597
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All DBs
Position
2:complement(39674825..39676921)
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AA seq
338 aa
AA seq
DB search
MSSPTDQLQTLSISTNLDAEPRKVLGLAGNRVAKEDDDHLKKNNKKKDIVEIKTKSSVKL
TNRLAQQVVVVKKNDDESVDSLCSSKSTSSSSSSSNGNIYVKKASSKKREKMVGDGSLVV
KVSIPFKRCHWITQFSDPLHVSFHDEEWGVPVHEDYKLFELLVLSLASAELTWPEILYKR
DKFRKLFENFDPSTIAKFPEDRLFSATQNGSQLLSEQKLRAVVGNAIAFLKIQQEFGSFS
SYCWRFLNNKPIKNAFRYARQVPAKTPKSELISKDLMKRGFCCVGPIVIYSFMQISGMVN
DHLISCFRYTECNSIVKRDVKPIAKETKQRIDILDDTN
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctccaactgatcagcttcaaacattgtcaatatcaacaaatctggatgccgaa
ccacggaaggtactaggactggctggaaaccgagttgctaaagaagatgatgatcatttg
aagaaaaacaacaagaagaaagatatagtggaaataaagactaaaagtagtgttaagtta
actaatagattggcacaacaagtagtggttgttaagaaaaatgatgatgaatctgttgac
agtttgtgctcttcaaaatcgacgtcttcctcttcttcttcttcaaatggtaacatttat
gttaagaaagcaagttcgaaaaagagagagaagatggtaggggatggctcgttggtggtg
aaagtgtctattccatttaaacgatgccattggatcacccaattctcagatccacttcat
gtttctttccatgatgaagaatggggggttcccgttcatgaagactataagttatttgag
ctacttgttttgtcactagcatctgcagaactcacttggccagaaattctttataaaaga
gataaattcagaaagctttttgaaaacttcgatccgtcaaccattgctaaattccctgag
gacaggttattttcggccacgcaaaatggtagccagttactatctgaacaaaagttgcgt
gccgttgtggggaatgctattgcgtttcttaagattcagcaagagtttggttccttcagc
agctactgctggcgcttcttaaacaacaagcctataaaaaatgcatttcgctatgcgcgt
caagtaccagctaaaacaccaaagtcagaactcataagcaaggatttgatgaaaagaggc
ttttgttgtgtgggccctattgtaatctattctttcatgcaaatctcgggtatggtcaac
gatcatcttatatcatgtttcagatacaccgagtgcaacagcattgttaaaagagatgtc
aagcccatcgctaaagaaacaaaacagagaatcgacatcttagatgatactaattaa
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