Erigeron canadensis (horseweed): 122589577
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Entry
122589577 CDS
T07610
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122589577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122589577
04147 Exosome [BR:
ecad04147
]
122589577
04090 CD molecules [BR:
ecad04090
]
122589577
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122589577
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122589577
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122589577
CD molecules [BR:
ecad04090
]
Proteins
122589577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
RsgA_GTPase
AAA_22
AAA_21
AAA_16
Zeta_toxin
MMR_HSR1
G-alpha
AAA_30
APS_kinase
Motif
Other DBs
NCBI-GeneID:
122589577
NCBI-ProteinID:
XP_043617816
LinkDB
All DBs
Position
2:complement(42704573..42709847)
Genome browser
AA seq
1157 aa
AA seq
DB search
MYIYIALFVASGAFIEGFCWGHTAERQSSRIRTKYLRSVLRQEIGYFDKSLEASRVVTNI
STDISINIQGVLAEKIPDFIANLCMSVTAELTGVYLCWRLAIVALPAIILLIIPGAVYGN
LLAKNEDKLHEAYAVAGGIAEQAFSSIKTVHSYVGEEKMVRRFSDALGSTLTLGIRQGLL
KGMVFGSFGVIFSIFALMSWYGSILVINKGVKGGDILSAGLCIVYGGFGLGASLMNIKHF
AEAKISAAFVNEIINRVPIIDSTDEQGTTLSMVKGELEFKDVDFAYPSRPESLVLKNVNL
KIETGQTVGLVGQSGSGKSTIVNLLERFYDPIKGEILLDGVNIKSLQVKWLRSQMGLVSQ
EPILFATTIRENILFGKEDATIDEVVEAAKKSNAHNFITQLPNGYNTLVGELGTQMSGGQ
KQRISIARALLREPKILLLDEATSSLDSHSEKAVQEALTRASVGRTTIVIAHLLSIVRHA
DLIIVIKSGEVIESGSHKELIQKVSGPYSIMVQVQKTRVKNGQSSPSSEDIKAKIMETPV
AEDETLEGQKLAKSHFEEVTYRHSEEESCKPSWWNLMRMTAPEWKSTLMGAIGALLSGSV
QPLVACFQAVMLSIFFLTDHGEIRSQTRSLCFAFLTISISAIISSVTQHYYFGIMGENLT
KKIRSAIFEKIMTFEIEWFDQEDNNTGALCSRLSTETLMVRNLVADRLAFFAQSISASIL
ATIWGMILSWRLASLALTLQLFIIGSFYLKVVMTRNMSKKVLIARNKSCGIASESVSNQR
IITAYDSQGQVMKLFEDSQSGPNKESKKQPLYAGIALFTRQFLTNGNIAILYWYGGKLLY
HGDITYQRLFQTYFIVVTAGILIAEAGSMTGDISVGANALKSIFTVLNRDGKMKTDPLQH
NVLTPKMINGQIELKEVQFTYLTRPTKMVLKGLSLKIEAGEVAALVGVSGSGKSTIIGMI
QRFYDPTMGSVEVDGVDIKCYNIKALRSSIAWVGQEPSLFSGTVKENIAYGKENATEAEI
IQAASLANIHEFISSLKDGYDTVCGKRGTQLSGGQKQRIAIARAILKNPSILLLDEATSA
LDVRSETIVQDALEKTMVGRTCVIIAHRLSTIQRSKKIVVIDNGSVLEEGSHDGLLAKGE
KSAYFSLFNLHQQSFTE
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtatatctatatagctctttttgtggcttcaggtgcatttatagaaggattttgttgg
ggacacactgcagaaagacaatcatcacggatacgcactaaatatttaagatccgttcta
cgacaagaaatcgggtactttgacaaaagtctagaagcgtcacgtgtagtcacaaatata
tcaactgatatatcaataaacatacaaggagtccttgctgaaaagattcccgacttcatt
gcaaatctatgcatgtccgtgacagctgaattaacgggtgtgtacctctgttggagatta
gcgattgtggcattgcctgctattattttgcttattattccaggggcagtttatggaaac
ctcttggcaaaaaatgaagataagctacatgaagcttatgcagttgctggagggatagca
gagcaggcattttcttcaattaaaacagttcactcatatgttggagaggaaaagatggtg
aggcgtttttcagacgctttaggatcaactctaactctcgggattagacaaggtttactg
aaaggaatggttttcggaagctttggtgtcatattttctatttttgcactaatgagttgg
tatgggagcatcttagtcattaataaaggagtcaaaggtggagatattctcagtgctggt
ttgtgcattgtctatggaggattcggtcttggagcttctttaatgaatatcaagcatttt
gcggaagccaagatttcagcagcctttgttaacgagattattaacagggtgccgatcata
gattcaacagacgaacaaggcacaacattatccatggttaaaggtgagctggagttcaaa
gacgttgactttgcttacccatcaagaccagaaagcctggttctaaaaaatgtcaacctc
aagatagagactggtcagaccgtaggattagttggccaaagtggctccggtaagtcaaca
atagtcaatctgctggaaagattctatgatccaattaaaggggagatattactggatgga
gttaacataaagtcactccaggtaaagtggttaagaagtcagatgggtttagtaagccaa
gagcctatactatttgcaacaactatcagagagaacatcctattcggtaaagaagatgct
acaattgatgaagttgtagaagcagctaaaaagtccaatgcccacaactttatcacacaa
ctaccaaacgggtataacacattggtgggagaattaggaacacaaatgtcaggagggcag
aagcaacgaatttccatcgcaagggcattgcttagagagccaaaaattcttctcctggat
gaagccactagttccttagactcgcattctgagaaagcagtccaggaagctttgacgcgg
gcctcagtaggaagaacaacaatagtcattgcacatttgttatcgatagtccgtcatgca
gatttgattattgttataaaatcaggagaagtgatagagtctggttcacataaagaactt
attcaaaaagttagtggtccatactcgatcatggtgcaggtacagaagacaagggttaaa
aatggtcaaagttcaccatcatctgaagatatcaaagctaaaatcatggaaactccagta
gcagaagatgaaaccctagaggggcagaaactcgccaaatcccatttcgaagaagtgact
taccgacactcggaggaagaatcctgcaagccatcatggtggaacctaatgcggatgact
gcacctgaatggaagtcgactctaatgggagctattggtgctcttcttagtggttcagtg
caaccattggttgcatgctttcaagcagtaatgctgtccatattttttctcaccgatcat
ggcgaaatcagatctcaaacaagatcattatgcttcgccttcttgaccatttctatctct
gccataatttccagtgtgactcagcattactattttggaataatgggagaaaacttgaca
aagaagatcagatcagcaatctttgaaaagattatgacctttgagatcgaatggtttgat
caagaagacaacaacaccggggccctatgttcaagactatctactgagacactaatggtt
aggaatcttgtagctgatagattggcgttttttgcccagtctatttcagcctctatttta
gcgaccatttgggggatgatattgtcttggagactagctagtttagctttgactttgcaa
ctattcatcatcggtagtttctacttgaaagtagtaatgacaagaaacatgtccaagaaa
gttttgattgcacgaaacaagagctgtggaatagcaagtgagtctgttagtaatcaaaga
atcatcaccgcatatgactctcaaggccaggttatgaaattatttgaagattcacaaagc
ggtccaaacaaagagagcaagaagcaaccattatatgcaggaatagctttatttactcga
caattcctaacgaatggtaacatagccatactttactggtatggagggaagcttttgtac
catggtgacatcacataccaaaggctatttcagacttactttattgtggtaacagcaggg
atattaatagctgaggcaggaagcatgacaggagatatatctgtaggagcaaatgcctta
aagtcgatctttacagttttaaatagagatggtaagatgaaaaccgacccattacagcat
aatgttctcactccgaaaatgataaacgggcagatagaactaaaagaggtgcagtttact
tacctgacaagaccaacaaagatggttcttaaaggtttgagtttgaagatcgaagctgga
gaagttgcagctcttgttggagtaagtggatccggaaaatcaacaattattggaatgatt
cagagattttatgatccgacaatgggatctgtggaagtggacggtgttgatatcaaatgc
tacaacattaaagcgttacggtcctctattgcatgggttggccaggagcctagtctattt
tcaggaactgtaaaagaaaatattgcctacgggaaagagaatgcaacagaagctgagata
attcaagcagcaagccttgccaatatccatgaatttataagttccttgaaagatggatat
gacacagtttgtggaaaaagaggtacacaattatcaggggggcagaagcaaagaattgct
attgcaagagcaatcctgaaaaatccatccattttactactggatgaggcaacgagtgca
ctagatgtcagatcagagactattgtccaagatgctttggagaagaccatggttggtagg
acatgtgtgattatagctcatcggttgtctactatacaaagatcaaagaaaatagttgtg
attgacaacggcagtgttcttgaggagggttctcatgatggtttgctagccaaaggagaa
aaaagtgcttacttttcacttttcaatctccatcaacaatcattcaccgagtaa
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integrated database retrieval system
