Erigeron canadensis (horseweed): 122591974
Help
Entry
122591974 CDS
T07610
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122591974
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122591974
04147 Exosome [BR:
ecad04147
]
122591974
04090 CD molecules [BR:
ecad04090
]
122591974
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122591974
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122591974
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122591974
CD molecules [BR:
ecad04090
]
Proteins
122591974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
Zeta_toxin
ABC_ATPase
AAA_16
RsgA_GTPase
AAA_22
AAA_5
AAA_15
SbcC_Walker_B
nSTAND1
Motif
Other DBs
NCBI-GeneID:
122591974
NCBI-ProteinID:
XP_043620127
LinkDB
All DBs
Position
3:34139052..34145071
Genome browser
AA seq
1253 aa
AA seq
DB search
MEDNKKNGIFRYAEGYDKFLMFFGTLGSIGDGLQFPLMMYILSDVINKYGDVHTKVTLST
VDEYSLRLLYAAILVGVSAFVEGLCWARTAERQTSRMRLEYLKSVLKQDVGFFDTQEAGT
STTYQVVSTITADSNAIQVTIGEKIPDTIAYLSSFFFCHLFAFTLSWRLTFAALPFSVIF
LIPAMGLGKHMMDVGMLMVASYDTAGSIAEQAVSSIRTVYSYVGEQQTIDKFSNALQTTM
KLGMKQGFARGLMLGSMGIIYISWAFQGWIGSLLVTKHREKGGDVFAAGFNILMGGLNVL
TALPNLTAISESKGAATRISEMIDRQPTIDSEGKKGKALSYVRGQIEFKGVYFNYPSRPD
SPILQGLNLRIPASKTVGLVGGSGSGKSTIVSLIQRFYDPIEGDILLDGHKINKLHLKWL
RSQMGLVNQEPILFATSIKENILFGKEGGSFDDIVAAAKDANAHDFIVKLPDGYETNVGQ
SGIQLSGGQKQRVAIARALIRDPKILLLDEATSALDSESERVVQKAIDQVSVGRTTIVIA
HRLSTIRRAHLIYVIKSGKVIESGSHDELMQMNKTQGDAGEYFKMVQLQQSETEVMDISS
TNNFQSPHRMVVAASPRSVRSSAPSTPSLNPFSPVFSMGTPYSVQFDASYGSDYDDNFNE
KSYPAPSLSRLMKMNAPEWVTALWGCLGAIGSGAIQPINGYCAGAMINVYFQPDKSTIIK
HARRYSFMYLGIGIFNFIISVIQHYNFSVMGEKLTTRVRKRLLEKILTFEIGWFDKEENT
SAAICARLSSDANMVRSLVGDRLSLLTQAFFGAVLAYALGLVLSWRLALVLMAAQPLLIG
SYYARSVLMKSLSEKSQKAQQEGSQLASEAVINHRTITAFSSQKRVVSLFKDTLQGPKEE
SIRQSYYSGVGLFSAQFMATASTALAYWYGGRLLTQGLIAPERIFQAFLVLLFTAYTIAD
AGAMTKDISRGSNAVSSVFAILDKKTEIDPDTSHGRDPVKGNMRGRVELRNVFFAYPSRP
DQLVFKGLNLKIKEGTSVALVGPSGSGKSTIIGLIERFYDPLKGVVYIDERDIKEYNLRA
LRSNIALVSQEPTLFAGTIRENITYAKPYAEESEIRNAAMLANAHEFISGMQDGYETYCG
ERGVQLSGGQKQRIALARAILKDPAILLLDEATSALDSVSESLVQEALEKMMNGRTCIMI
AHRLSTIQNADSISVIKDGKVVEQGCHSDLVSIRGGAYLNLVKMQHNNSPFQH
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggaggataataaaaaaaatggtatatttcgttatgcagaagggtacgacaagtttctg
atgttttttggaacactgggaagcattggtgatgggctgcaattccctttgatgatgtac
attcttagtgatgtcattaataaatatggtgatgtccataccaaagtcacactttctact
gtcgatgagtattcactaaggttgctctatgctgcaattttagttggggtatctgctttt
gttgaaggactttgttgggcacggactgcagagagacagacttcccgtatgagactcgaa
tacctaaagtcagtgcttaaacaagatgttggattttttgacacccaagaagctggtacc
tctacaacgtaccaggttgtttcaaccatcaccgccgactctaatgccattcaagtcacc
attggcgaaaagataccggatactatcgcctacttgtcatccttcttcttctgccacttg
tttgcgtttacactatcatggaggcttacattcgccgccctcccattctctgtaatattc
ctaataccagcaatgggattgggtaagcacatgatggatgtagggatgctaatggttgca
tcatatgatactgctggtagtattgcagaacaagcagtttcatccataagaactgtgtat
tcttatgttggagagcaacagacaattgataagttcagcaatgcgcttcaaacaactatg
aaactaggaatgaaacaaggttttgctagaggactaatgctcggaagcatggggattata
tacattagttgggcatttcagggttggatcggatctcttcttgtcactaaacatagagaa
aagggcggtgatgtttttgcagcaggatttaacatactcatgggaggattgaatgtcttg
actgcactgcccaatctaactgccatttcggagtcaaaaggtgctgccactcgaatcagt
gagatgatcgacagacaaccaactatcgattctgaaggtaagaaaggaaaggctctatca
tacgttagagggcaaatcgagttcaaaggagtctactttaactacccatcaaggcccgat
agcccgattctacaaggtttgaatcttagaatcccagctagtaaaactgttggacttgtt
ggaggtagtggttcagggaaatcgacaattgtgtcgctgattcaaaggttttatgatccc
atagagggtgacattcttttggatggacacaaaataaacaaacttcatcttaaatggttg
agatcacaaatgggtctggtgaatcaagagccgattctctttgcaacttctatcaaagag
aacatactgtttgggaaagaaggaggatcgtttgacgatattgtagctgcagctaaggat
gcaaatgcacatgacttcattgttaagttgccagatgggtatgaaactaatgttggacaa
tctggaattcaactatctggagggcaaaaacagcgtgttgcaatagcccgggcgctaata
agagatcctaaaatcttgctccttgatgaagcaacaagtgcactcgactcagagtctgaa
cgggttgtacagaaagccattgatcaggtgtcagttgggagaactactatagttattgct
catcgtttgtcaacaattaggagggcccatctgatatatgttattaaatcaggaaaagta
atcgaatcaggttcacatgatgagctgatgcaaatgaacaaaactcaaggtgatgctggc
gaatacttcaaaatggtgcaattacaacaatcagaaactgaagttatggacatatctagt
accaacaatttccaaagtccccatagaatggtggtagcagccagcccgagaagtgtgaga
tcaagtgcaccaagcactccatcactgaacccattcagcccggttttctctatgggtaca
ccctattctgttcagtttgatgcttcttatggcagtgattatgatgataattttaatgaa
aaatcttatcctgctccttccctatcccgtttgatgaaaatgaatgcaccagagtgggta
acagccctatgggggtgtttaggggctataggatccggtgcaatacaaccaatcaatgga
tattgtgctggagctatgataaacgtttatttccagcctgataagtccaccattattaaa
catgcaagaaggtactcattcatgtatttaggtatcggcattttcaacttcatcattagt
gttatccaacattacaacttttctgtgatgggtgagaagttgaccaccagagtaagaaag
agactacttgaaaagattttgacttttgagattgggtggtttgataaagaagagaacacg
agtgcagccatttgtgcccgattatcctctgacgctaatatggtccgttcacttgttgga
gaccgtttatcgttactaacacaagcattttttggggctgttttagcatatgcattagga
cttgtactctcatggaggctagcacttgtattaatggctgcgcaaccactcctaatcggt
agttactatgctaggagtgttttaatgaaaagtctatctgaaaaatctcaaaaggctcaa
caggaaggaagccaacttgcaagtgaagccgttatcaaccatagaacaataactgcattt
tcttctcaaaaaagggtggtaagcctttttaaggacacgttacaaggccctaaagaggaa
agtattagacaatcatattattcaggagtcggactttttagtgcacagtttatggcaaca
gcttcaactgctttagcatattggtatgggggtcggttattaacacaaggactaatagct
cccgagaggatttttcaagcatttctagtattgttattcacagcatatacaatagctgat
gctggggctatgactaaagatatatcaagaggaagtaacgctgttagttcagtctttgca
atactggacaagaaaactgagatcgatcctgatacttcacatggtcgtgatcctgtaaaa
gggaacatgaggggtcgagtggaattaagaaatgtgttttttgcatatccctctagacct
gatcagttggtttttaaagggttgaacctcaaaataaaggaaggtacttcagtagcactt
gtgggcccgagtggatcgggcaagtctactatcattgggttgatagaaaggttctatgac
ccgttgaagggcgtggtttacatagatgaacgagacataaaggagtataacttaagagca
ttgaggtccaatatcgcattagtgagtcaagagccaactctttttgcaggtaccatccgt
gaaaacattacttacgcaaaaccatacgctgaggaatctgaaatcaggaatgcagcaatg
cttgctaatgctcatgagttcataagtggcatgcaagacggatatgaaacatattgtggc
gaaaggggtgtgcaactatcgggtggtcagaaacaaagaatagcattagctcgagccatt
ctcaaggaccctgcgattctactgttggatgaagcaacgagtgctcttgatagcgtatca
gaaagcctagttcaagaagcattggagaaaatgatgaatggacgaacatgtataatgatt
gctcaccgtctctctacaatacaaaatgctgattccatatctgtcattaaagatggaaag
gtggtggaacaagggtgtcattctgatcttgtatctattcgtggtggagcatatttgaat
ctcgtgaaaatgcagcacaacaactcgcctttccagcattaa
DBGET
integrated database retrieval system
