KEGG   Erigeron canadensis (horseweed): 122592419
Entry
122592419         CDS       T07610                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3D
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
ecad  Erigeron canadensis (horseweed)
Pathway
ecad03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:ecad00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    122592419
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ecad03021]
    122592419
   03036 Chromosome and associated proteins [BR:ecad03036]
    122592419
Transcription machinery [BR:ecad03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     122592419
Chromosome and associated proteins [BR:ecad03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    122592419
   PBAF complex
    122592419
   GBAF(ncBAF) complex
    122592419
SSDB
Motif
Pfam: SWIRM-assoc_1 SWIRM Myb_DNA-binding ZZ Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 122592419
NCBI-ProteinID: XP_043620572
LinkDB
Position
3:29884891..29892207
AA seq 1016 aa
MEEKHNSPAKPTDPPPPSTADPPSSSRRRLKRKASTSNNNNNSNNNPTPKRQAREKHHQQ
QNQQQSPVLYGPIHNGPLTRARLQPNYVDSNVTASFWDAVVVENNSGGNSNNNNVGGVDL
KIQEEELIKRKEAWDALEAKIESQFDEFKLKDVNTSHFVPVSCGWFSWTKVHPLEEKALS
SFFNGKLENRTSEMYMEIRNAIVKRFHANPTTQIEEKDLLEISVGELDARKEVMEFLDYW
GLINYHPFPETDVTSSVGDPEETGKVKSLVQKLYEFEVEQLSLPAAPRSNFAIPALPSRL
PESMITDESVQPEGPSVEYHCNSCSADCSRKRYHCQKQADFDLCSECFNDGKFDSDMAPS
DFIIMEPGDAAGANSGKWTDQETLLLLEALELFKENWNEIAEHVATKTKAQCILHFVQMP
IEDTFRDCDDEDDTNDKEKTEKVETNADESDKKKEIAESNKENTDKKEVDQENAGKKEVD
QENTDKKEVDQENTGKKEVDQENADKKEVDEKNDDSKDAKETEEPKAVDGAPSNNNQPES
SPMEISEPADTNKLKDDRENGVNNIAVKALREAFDAVGSLSSLDEKLSFADAGNPVMAMA
AFLTRLVEPNLVTASARTSLKSVSKGGTGLQLSARHSFVLEDPADEKKPDDTESKANDTE
KKPDDMERKPDGAEKKTDDTERSMDIDVPEVVEEEVMKKKNDLVNDLKDKEGANVTRKEK
DNVLASSEKKEEPVLAEVVATKKGKNAGSRRKGSSKKDRVPVTEKSVVTEETNKQAHQDD
APSNSKKESADSFNGAPPLVVSQSTEAPKDEEMTEKAEPSQSTLAEKTENSEDVAAKDTN
TVDKRLLDSKDNSSMHKLTRAAVTAISAAAVKAKLLADQEEDHIRQLATALVEKQLYKLE
AKLAFFTEMDGVVSRAREQLERSKQRLYQERAQIIAARLGMSSANSTRPMAQSLPNRPGA
AFPNAGQRPPNPMNMTPQRPPLSRPMMGPTPPFSNPVGPSTLVGNSAQISTNQAMK
NT seq 3051 nt   +upstreamnt  +downstreamnt
atggaagaaaaacacaactcaccggcgaaacccaccgacccaccaccaccatcaacggcg
gacccaccatcatcatcacgccgtcgtctaaaacgaaaagcctcaacttccaataacaat
aacaattccaacaacaacccgacaccaaaacgacaagcaagagaaaaacatcatcaacaa
caaaaccaacaacagtcaccagtgttatatggtccgatccataatgggccgttgaccaga
gcaaggttacagcctaattacgttgactcaaatgtaacggcgtcgttttgggatgcagtt
gtagtggaaaacaatagtggtgggaatagtaataacaataatgttggaggggtggatttg
aaaattcaagaagaggaattgattaagagaaaagaagcttgggatgctttggaagctaaa
attgaaagtcaatttgatgaatttaagttaaaagatgtcaacacttctcattttgttccg
gtttcttgtggttggttttcatggacaaaggttcatccattggaggagaaagcattatct
tctttcttcaacggaaaactggagaatcggacttctgaaatgtacatggaaatacggaat
gccattgtgaaaagatttcatgcaaaccccactacccaaatagaagaaaaggatcttttg
gagatatcagttggggaattggatgctaggaaagaggtgatggagtttttagactattgg
gggctgattaattaccatccgtttcccgagacagatgtcaccagctcggttggtgatcct
gaagaaactggaaaagtaaaatcattggtccagaaattgtacgagtttgaggtggaacag
ttgagtttgccagctgctcccaggagtaattttgcaattcctgcacttccatcgcggttg
cctgagtccatgataactgatgaatcggtgcagcctgagggaccatctgttgagtatcac
tgcaattcatgttcagctgattgctctcgtaagcgctatcactgtcagaagcaggcagat
tttgacttatgtagtgaatgcttcaatgacggcaagtttgactctgatatggccccatct
gattttattattatggagcctggtgatgctgctggtgcaaatagtgggaagtggacagat
caagagacattgctcctcctcgaagccctggaactcttcaaagagaactggaacgagatc
gctgaacatgttgccacaaaaacaaaagctcagtgtatcttacactttgttcaaatgcca
attgaagatacttttagggattgtgatgatgaagatgatacaaatgacaaagaaaaaact
gagaaggtagaaacaaatgcagatgaaagcgacaaaaagaaagaaatcgctgagagtaac
aaggaaaatactgacaaaaaagaagttgatcaggaaaatgctgggaagaaagaagttgat
caggaaaatactgataaaaaagaagttgaccaggaaaatactggcaaaaaagaagttgat
caggaaaatgctgacaaaaaagaagttgatgagaaaaatgatgattccaaagatgcaaaa
gaaaccgaggaaccaaaggccgttgatggcgctccatcaaataacaatcagcctgaatct
tctccaatggagatttcagaaccggcggatactaataaattgaaagatgatcgggaaaat
ggtgtgaacaatattgcagtgaaagcactcagagaagcatttgatgctgtggggtctctt
tcttcacttgatgagaaactttcttttgctgatgccggtaaccctgttatggcaatggca
gcattcctgactcggttggtggaacctaatttagtgactgcttctgcccgtacctctctg
aaatctgtgtctaaaggcggcacgggattgcagctgtcagcaagacattcctttgttctg
gaagatccagctgatgaaaagaaaccagatgacacggagagcaaagcaaatgacacagag
aagaaaccagatgacatggagaggaaaccagatggcgcagagaagaaaacagatgacaca
gagagatcaatggacatagatgtgccagaagtggtggaggaagaagtcatgaaaaagaag
aatgatttggtaaatgatctcaaggacaaagagggtgccaatgtaactcgaaaagagaaa
gacaatgtgttggcttcctccgaaaaaaaggaagagccagttctagcagaagtagtagct
acgaagaagggcaagaatgctggctcacggagaaagggttcttcaaagaaagacagggtt
ccagttactgagaaatcagttgttactgaagaaactaataaacaagctcatcaagatgat
gctccttcaaattctaaaaaggagtctgctgattcttttaatggtgctccaccgttagtg
gtttcccagtctaccgaggctccaaaggatgaggagatgacagaaaaggcagaaccttcc
caatctacattggctgaaaagactgaaaattcagaggatgttgcagcaaaagacactaat
actgtggacaaacgtcttctagacagtaaagacaactcaagtatgcataagctgacacgt
gcagctgttactgccatttctgctgcagctgttaaggcaaaactactggcagaccaagaa
gaggaccatattcgacagcttgccacagcattggtagagaagcagctgtacaaattggag
gctaagttggctttctttactgaaatggatggtgtcgtatcaagggctcgggaacaattg
gaaaggtcaaagcagagactctaccaagaacgggcccaaataattgctgccagattgggc
atgtcgtctgctaattctaccaggcctatggcacaatcgttaccaaacagaccaggtgcg
gcatttccaaatgctggacaaaggcctccaaatccgatgaacatgactcctcaaagacca
ccactttcaagacctatgatgggaccaacaccgcctttttcgaacccggtgggacccagc
acacttgtaggaaactctgctcagatttcaaccaaccaggcaatgaaataa

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