Erigeron canadensis (horseweed): 122592557
Help
Entry
122592557 CDS
T07610
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122592557
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122592557
04147 Exosome [BR:
ecad04147
]
122592557
04090 CD molecules [BR:
ecad04090
]
122592557
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122592557
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122592557
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122592557
CD molecules [BR:
ecad04090
]
Proteins
122592557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
Zeta_toxin
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_15
nSTAND1
PFK
Motif
Other DBs
NCBI-GeneID:
122592557
NCBI-ProteinID:
XP_043620752
LinkDB
All DBs
Position
3:34146576..34151775
Genome browser
AA seq
1241 aa
AA seq
DB search
MENKKKDGIFRYANGFDKFLMFWGTIGSIGDGLQVPLTMFVLSGIINDYGNPNTPVTLSI
VNKYSLRLMYVALSVGLSAFVEGLCWARTSERQTSRMRLKYLKAVLQQDVSFFDTQEAGT
SATYEVVSTITADSNAIHVTIGEKIPDTIANLSAVFFCHVFAFTLSWRLTLAALPFSVMF
LVPALGFSKLVMDAGMAMVKSYGAAGTIAEQAIASIRTVYSYVGEHQVIDKFSHALKTTT
KLGIKQGFARGVMLGSMGIIYINWAFQAWFGSLLITKHGEKGGDVFVAGFNVLMGGVYVL
IALPNLTAILESKGAVTRICDMIDRNSTLDSEDKKGKALSCVRGQIEFKGIYFNYPSRPD
TPILQGLDLTIPASKTVGLVGGSGSGKSTIVSLIQRFYDPIEGDILLDGHKINKLHLKWL
RSQMGLVNQEPILFATSIKENILFGKEGASFDDIVAAAKDANAHDFIVKFPDGYETNVGQ
FGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDTESERVVQKAIDQASIGRTTIVIA
HRLSTIRRASLIYVLHSGKVVESGSHDELTQTKGGHYFKMMQLQQSAVGAEFQSPHRLSI
TSSPRSVRSSAPNTPSLNPFSPGFSMGTPYSVQFEASYDTDYEDSIRKLSHQAPSQIRLL
KMNAPEWVAALWGCLGAIGSGAVQPINAYCVGGVINVYFQLNKSTIVDHARRYSYVFLAV
GVFSFFSSVIQYYNFSVMGENLTTRIREKLLEKLLTFEIGWFDRDENTSAAICAMLSSEA
NMVRSLVADRMSLLTQAVFSAIFAYTLGMVLSWRLTLVLLVAQPFLIGSLYARRVLMKSL
SEKSQKAQTEGSQLASEAVINHRTITAFSSQKRVVGLFKDTLQGPKSESIRQSYYSGVGL
FCSQFFTTASTALAFWYGGRLLTENLIAPEKLFQAFLVLLLTAYTIADAGRMTKDISRGS
TAVSSVFAILDKKTEIDPDTSSGHDSAERNIRGRVELRNVFFAYPSRPDHMIFNGLNLKI
KQGASVALVGPSGSGKSTIIGLIERFYDPLKGTVYIDELDIKEYNLRKLRSHIALVSQEP
TLFAGTILENIAYGKPNATESEIRNAAALANAHEFISGMKDGYETYCGERGVQLSGGQKQ
RIALARAIIKNPAILLLDEATSALDTISESLVQEALEKMMNGRTCIVVAHRLSTIQNSES
IAVIKDGKVVEQGRHTDLLSVQGGAYSNLVKMQVSNSPLRQ
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataagaaaaaagatggcatctttaggtatgcaaacgggtttgacaagttttta
atgttttggggaacaatcggaagtattggagatggattgcaagtccctttaacgatgttt
gttcttagcggtatcatcaatgactatggaaacccaaatacccctgtgacactttctatc
gtcaataagtattcactcaggttgatgtatgttgctctttcagttgggttatctgcattt
gttgaaggactttgttgggcaaggacctcagagagacagacttcccgtatgagactcaag
tacttgaaagctgtgcttcaacaagatgttagtttctttgacactcaagaagctggtacc
tctgcaacttatgaagttgtctcgactatcacagctgattctaatgcaatccacgtcacc
attggcgaaaagataccagatactattgccaacttgtcagccgtctttttttgccatgtg
tttgcatttacactatcatggaggcttacattagccgctctcccattctccgtaatgttc
cttgtacccgccctggggtttagcaagcttgtgatggatgctggaatggcaatggttaaa
tcatatggtgctgctggtactattgcagaacaagcaattgcttccataagaactgtgtat
tcctatgttggagaacatcaagtaattgataagtttagccatgcattgaaaaccacgaca
aaactaggaataaaacaagggtttgcaagaggggtaatgcttggaagcatggggatcatt
tacattaactgggcgtttcaggcttggtttggatctcttctaatcactaaacatggagaa
aaaggtggtgatgttttcgttgctggatttaacgtcctcatgggaggagtgtatgtcctg
attgcgctcccaaatcttactgccattttagagtctaaaggcgctgttactcgaatctgt
gatatgattgacagaaactcaactttggactctgaagacaaaaaaggaaaggctctatca
tgtgtgagaggccaaatcgaatttaaaggaatctactttaactacccatcaaggcctgat
acaccgatcctacaagggttagatcttacaataccagctagtaaaactgttggacttgtt
ggaggcagtggttcagggaaatcgacaattgtgtcattaattcaaaggttctatgatcct
atagagggtgacattcttttggatggacacaaaataaacaaacttcatcttaaatggttg
agatcacaaatgggtctggttaatcaagagccgattctctttgcaacttcaatcaaagag
aacatactgtttggcaaagaaggagcatcttttgatgatattgttgcagcagctaaggat
gcaaatgcacatgacttcattgtcaagtttccagatggctatgaaactaatgttgggcaa
tttggggttcaactatctggagggcaaaagcagcgaattgcaatagctcgagcactaata
agagatcctaaaatcttgctccttgacgaagcaacaagtgcactcgacacagagtctgaa
cgagttgtgcagaaagccattgaccaggcgtccattggaagaacaactattgtaattgca
catcgtctctcaacaattagacgggccagtctgatctatgtgcttcactctggaaaggta
gtcgaatcaggttcacatgatgagctgacacaaacaaaaggtggtcattactttaaaatg
atgcagttacaacaatctgctgtgggagctgaattccaaagtccacatagattgtcgatt
acttccagcccaagaagtgtgagatcaagtgcaccgaacaccccatcactgaacccattc
agcccagggttctccatgggtaccccatattcggttcaatttgaggcttcttatgatact
gactatgaagatagcattagaaaactatctcatcaagctccctcccaaatccgtttattg
aaaatgaatgcacccgagtgggtagcagccttgtggggttgcttgggtgctatagggtct
ggtgcagtacaacccatcaatgcatattgtgtaggcggtgtgatcaatgtgtacttccag
ttaaataaatccaccattgttgatcacgcaaggagatattcctatgtgttcttagccgtc
ggtgtcttcagcttcttctctagtgtcatccaatattacaacttttctgtcatgggtgag
aacttgacaacacggatacgcgagaagcttcttgagaaacttctgactttcgaaattggg
tggttcgatcgagacgagaacacaagtgcggccatttgtgcaatgttatcatctgaagct
aatatggtccggtcacttgttgcagatcgtatgtcattactaacacaagcggttttcagt
gccatttttgcttatactttaggaatggtactctcatggagactaacacttgtattattg
gttgcgcaaccatttctaataggaagtctgtacgctaggcgagttttaatgaaaagttta
tccgaaaaatctcaaaaggctcaaacagaaggaagtcaactcgcaagtgaagcggttatc
aaccatagaacaataaccgccttttcttctcaaaaaagggtggttggtctctttaaggac
acactacaagggcctaaaagtgagagtatcagacaatcatattattcaggggtcgggcta
ttttgctcccagttttttacaacagcttcaactgctttagctttttggtatgggggtcgg
ttattaacagaaaacctaatagctcctgagaagcttttccaagcatttttggtgttgctg
ttaacggcatataccatagctgatgcaggaagaatgactaaagatatatcaagaggaagc
actgctgttagttcggtctttgcaattctcgacaagaaaacggagatcgaccctgatact
tcaagtggacatgattctgcagaaaggaacattaggggtcgtgtggagttgagaaatgtg
ttttttgcttacccgtctagacccgatcatatgatttttaacggattaaacctcaagata
aagcaaggagcttcagtagcacttgtgggcccgagtggatcgggtaaatctaccattata
gggttgatagagaggttttatgatccattaaaagggacagtttatattgatgaacttgac
ataaaggaatataacttacggaaactgaggtcacatatcgctttagtgagtcaagagcca
acactttttgcaggtaccattcttgaaaacattgcttacggaaaaccaaatgctacagaa
tccgagataaggaacgctgcagcccttgccaacgctcatgaattcataagtggaatgaaa
gacgggtatgaaacttattgtggcgaaagaggtgtgcagctatcgggaggccaaaagcaa
agaatagcattggctcgcgccattattaagaaccctgctattctattgttggatgaggca
actagtgctcttgataccatatcagaaagtttagttcaagaagcactggagaagatgatg
aatgggcggacatgtattgtagtggcgcaccgtctttccacaatacaaaactctgagtct
attgctgttattaaagatggaaaggtggtcgagcaagggcgtcatactgatcttttatct
gtacagggcggagcatactcaaatttggtgaagatgcaggtcagcaactcgcctttacgg
caataa
DBGET
integrated database retrieval system
