Erigeron canadensis (horseweed): 122595064
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Entry
122595064 CDS
T07610
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
122595064
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ecad01007
]
122595064
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ecad03016
]
122595064
Enzymes [BR:
ecad01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
122595064
Amino acid related enzymes [BR:
ecad01007
]
Aminoacyl-tRNA synthetase
Class I (U)
122595064
Transfer RNA biogenesis [BR:
ecad03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
122595064
Prokaryotic type
Other AARSs
122595064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
122595064
NCBI-ProteinID:
XP_043623289
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All DBs
Position
4:complement(41900310..41911306)
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AA seq
1182 aa
AA seq
DB search
MDDVCEGKDFSFPKQEEKVLQWWTEVKAFETQLEKTKDLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVEHEIDLKLGIKSREDVMKMGIDKYNEE
CRSIVTRYVGEWEKVITRTGRWIDFKNDYKTMDLSFMESVWWVFSELFKKNLVYRGFKVM
PYSTGCKTPLSNFEANSNYKEVPDPEIMVSFPIINDQDGAAFVAWTTTPWTLPSNLALCV
NSSLVYVKVKSKSNGKIYVVAESRLSELPVEKPKKGTPNGAVDDNSILKPKGSTGGKVKT
SVVAYEVLDKFPGSSLVGKKYVPLFDYFKDFTETAFRVVADDYVTSDSGTGIVHCAPAFG
EDDYRVCINNNIIKKGENLVMPVDDDGNFTQRITDFSGRYVKEADKDIIQAVKEKGRLVK
TGSFTHSYPFCWRSDTPLIYRAVPSWFVAVEKLKDKLLQNTEETKWVPTFVKEKRFHNWL
ENARDWAISRSRFWGTPLPIWISKDGVDVEVIGSVEELERRSGVKVTDLHRHKIDHITIP
SPRGPEFGVLHRVEDVFDCWFESGSMPYAYIHYPFENEEFFTKNFPGHFVAEGLDQTRGW
FYTLMVLSTALFDQPAFRNLICNGLVLAEDGKKMSKRLKNYPSPMEVIDDYGADALRLYI
INSPVVRAEPLRFKKDGVYSVVKDVFLPWYNAYRFLVQNAKRLEVEGLATFVPLDRATLL
NSDNVLDQWINSATQSLVHFVRQEMDAYRLYTVVPYLLKFIDNLTNIYVRFNRKRLKGRT
GEEDCRTALSTLYHVLVTSCKAMAPFTPFFTEVLYKNLRKISKGSEESIHFCSFPEVEGK
GGNRIEQSVNRMMTIIDYARNLRERNNKPLKTPLKEMIVVHSDVEFLDDITGKLKEYVLE
ELNVKSIVPCNNPLVYSSLHAEPEFSVLGKRLGKSMRVVADAVKAMSQKEILAFKEAGEV
TIAGHCLKLTDISVKLVFKRPDGLTVEQMDAHTEGDVMVIMDLRPDDTLIEAGFAREVVN
RVQKLRKKSGLEPTDLVEVYFTSLDEDPSVSAKMIKSQETFIKEVLGSSLLDFSMIPTHA
VIIAEETYKNISDCDFKIILSRVALMFNEKAIVELYAGNTNYAQALQVYLLSRDHGNLKS
EFQQGNGKLTVSCIENLPVVDVVLGKHLFFTVGDYAAVTNSM
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgtatgtgaagggaaagatttctcattccccaaacaagaagagaaggtctta
caatggtggacagaagtcaaagcgtttgagacccaacttgaaaaaaccaaagatttaccc
gaatacattttttacgatgggcctccatttgccactggacttcctcactatggtcatatc
ttagctggaacaatcaaggatattgtcacacggtaccagaccatgacggggcaccatgtt
acacggcggttcggttgggattgccatgggctgccggtggagcatgagattgacttgaag
ctcgggattaagagcagagaggatgtgatgaagatgggaattgataagtataatgaggaa
tgtaggagtattgttactaggtatgttggtgagtgggagaaggtgattacgaggaccggc
agatggattgattttaagaatgattataaaacgatggatttgagtttcatggagagtgta
tggtgggtgttttcagagttatttaagaagaatctagtttatagaggttttaaggtgatg
ccatacagtactggctgcaagactccactgtctaattttgaagctaattcaaattacaag
gaagtgcctgatcctgaaattatggttagtttcccaatcattaatgatcaagatggtgcc
gcatttgttgcatggactacaactccatggactctcccaagtaatcttgcactttgtgtc
aactccagtttggtatatgtgaaggtgaagagcaagtccaatgggaaaatatatgtagtt
gctgaatctcgtttatcagagcttccagtagaaaagccaaaaaaaggaacacctaatgga
gctgtggatgacaattcaattcttaaacccaagggatctactggtggaaaagtaaaaact
tcagtggttgcttatgaagtgttggataagtttccaggatcttcacttgtgggtaaaaag
tatgtcccattattcgattactttaaggatttcacagaaacggcattcagagttgtcgca
gatgattatgtaacttctgatagtggaactgggattgtgcattgtgctccagcatttggt
gaagatgattatcgcgtttgtatcaataacaacataatcaagaagggagaaaatctggtt
atgccagttgatgacgatgggaactttacacagagaattactgatttcagtggtcgttat
gttaaagaggctgataaagatattattcaagcagtgaaggaaaaaggcaggctggtgaaa
actggaagctttacacattcatatcccttttgctggagatctgatacacctctcatctac
agagcagttcccagctggtttgttgcagtagagaagttgaaagataaattgctacagaac
accgaggaaacaaaatgggttcccacttttgtaaaggaaaaacgctttcacaattggctg
gaaaatgcaagagattgggctattagtcgaagtaggttttggggtactcctcttcccata
tggattagtaaggatggcgtggatgttgaagtgattggctctgttgaagaacttgaaagg
cgttctggagtgaaggtcactgacttgcatcgccacaaaattgatcacatcacaattcct
agcccacgtggtccagaattcggcgtgcttcaccgtgtagaggatgtatttgactgctgg
tttgagagtgggtccatgccttatgcatatatccactacccttttgaaaatgaagaattt
ttcactaagaactttcctggacattttgtggctgaggggttagatcagactcgtggatgg
ttttacactctcatggtcctgtctacagcattatttgaccaacctgcattcaggaatctc
atatgcaatggccttgttttggcggaggatggtaaaaagatgagtaaaagattaaagaac
tatccttctcccatggaagttattgatgattatggtgctgatgcgctacgattatacatc
ataaattctccagttgtgcgtgcagaacctttacgttttaaaaaagatggagtctatagt
gttgtcaaagatgtatttttgccatggtacaatgcgtatagatttcttgttcaaaatgca
aaaagacttgaggtggagggtcttgcgacatttgttcctcttgaccgagccactcttctt
aactcagataatgtgcttgatcagtggattaactcagccactcagagcctggttcatttt
gttagacaggaaatggatgcttatcgactctatacagtggttccttatcttttgaagttc
attgacaatttaactaatatatacgtgagatttaaccgaaaaagattgaaaggccggact
ggagaagaggactgcaggactgcactttcaaccctctaccatgtgcttgtaacttcttgt
aaagcaatggctccatttacaccgttctttactgaggttctttataaaaacttgaggaaa
atatcgaaaggatcagaggaaagtatccatttttgtagttttcctgaagttgaagggaag
ggcgggaatcggattgaacaaagtgttaatagaatgatgacaatcatcgattatgcacgt
aatctacgtgaacgtaacaataaacctctaaaaactccactcaaggagatgattgtcgta
cattcggatgttgagtttcttgatgatattactgggaaactgaaagagtatgtgttagaa
gagctcaatgttaaatctattgtcccatgcaataatcctttggtatattcttccttgcat
gctgaacctgaattcagtgttttgggtaaaagactgggaaaatcaatgagagttgttgca
gatgcagtgaaggcaatgtctcaaaaagagattttagcatttaaagaagcaggggaagtt
actattgccggtcactgcttaaagctcactgatatcagcgttaagcttgtctttaaacgt
cctgatggtttgacagtagagcaaatggatgcacatactgaaggtgatgtcatggttata
atggacttgcgccctgatgatacgttgatcgaagctggttttgcacgcgaggttgttaac
cgtgtccagaagttaaggaaaaagtctggacttgaacccactgacttggtggaggtatac
tttacatcattggatgaagacccatcagtttctgccaaaatgataaaatcccaggaaact
tttatcaaagaggtgctaggctcttcgttacttgacttcagcatgatcccaacacatgct
gttatcattgcagaggagacctacaagaacatttcagactgtgatttcaagataattttg
tcaagagtagcattaatgttcaatgagaaggcaatcgttgaattatatgcagggaataca
aattatgcccaagcattgcaggtatatttgctgtccagggaccatgggaatttaaaatca
gaattccaacagggaaatgggaagttgacagtgagttgcattgaaaatctgcctgtcgtc
gatgtggtattgggtaaacatctattctttactgttggggattatgctgcagttaccaat
tctatgtga
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