Erigeron canadensis (horseweed): 122596701
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Entry
122596701 CDS
T07610
Name
(RefSeq) autophagy-related protein 11-like
KO
K08330
autophagy-related protein 11
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
122596701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecad04131
]
122596701
03029 Mitochondrial biogenesis [BR:
ecad03029
]
122596701
Membrane trafficking [BR:
ecad04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Scaffold protein
122596701
Mitophagy
Scaffold proteins
122596701
Mitochondrial biogenesis [BR:
ecad03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122596701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
ubiquitin
FliD_C
DUF1732
Motif
Other DBs
NCBI-GeneID:
122596701
NCBI-ProteinID:
XP_043625256
LinkDB
All DBs
Position
4:complement(40128742..40135507)
Genome browser
AA seq
1071 aa
AA seq
DB search
MSSSETLIQRGKLLVHIAENGHSFELDCDEDTLVEAVQQFLESLSGIRLNDQLLLYLDMK
LDPQNPLSAYKLPSEDGEVFVFNKSKMRTNSAPPGPEELELSESNYPDPPRPCSSHDTHP
LDEASDPALKALPSYERQFRYHYQLGDAIYRRTLVKFDACERLAREQMVQEKALEIARAN
LDHFYKMILQNYMDFVKCYSQQQRTHSNLLVNFGRDLERLKSIKLLPVLQTVDRKCLLDF
VKEDNLRKMVDDCSNSHRQFENKVGDFKQEFGELKRSTEHLFSSKASILSRDLGRTVKEH
EHHINEQKSIMQALSKDVGLVKKLVDDSLTSQLSSSLRPHDAVSALGPMYEGHDKSYLPK
MQDCERAISNLLIFCKNKKSEMNNFVHKYMQKIAYIQYTIKDVRYKFSVFTEALKRQNDQ
FEHLKVVRGIGPSYRACLAEIVRRKASMKLYMGMAGQLAERLATKRESEIRRREEFLKVN
SSYIPRDILASMGLYDTPNTCDVNVAPFDTNLLDIDIADVDRFAPEHLVGLSFKKASSSM
SQDVEESSESGTGNYNDFVEGSEMVEIAGTSKMEVENAKLKAELASTIALLCSFSPETDF
EDSEVGNVLKVAAEKTAEALRLKDEHEKHLLNMLKVKQMQCESYEKRIKELENRLSDQYC
LEHKLNKDESIRCASSEPMDEASYASSSLLLKSGGNDSSGTMNPNMDSSMVEPNRDEKDD
KETMVTDVGMVLATSSTADYMPGPLITVTSDEQVKSSGELVVELQNLLTEKLNQVDEIEA
KLQAALEEVTRLGSELETSRNLLDESQMNCAHLENCLHEAREEAQTHLCAADRRASEYTA
LRTSAVKIRSLFERLKTCVSSAGVNNLAESLLALAQSLANSANENGDDGTSDFREFVRVL
AEKVGILTRRRAELMDRYTKKEAELGEKKELVNTLYTKLQSEKQVNKEKISFGRLELHEI
AAFVLNVAGHYEAINRNSTHYYLSSESVALFTDHLPHRPTYIAGQIVHIERQTVKSSPVR
AERTTTTSSQFALNSGSNGANPYGLPVGCEYFVVTVAMLPDTTIHSPTAAS
NT seq
3216 nt
NT seq
+upstream
nt +downstream
nt
atgagttcgagtgaaactttgatacaaagggggaagcttttagttcatatagccgaaaat
gggcattcgtttgagcttgattgtgatgaagatacccttgttgaagcggttcaacaattt
ttggagtcactttctgggattcggttaaatgatcagcttcttttgtatttggatatgaag
ttggaccctcaaaatcctctttctgcatacaaacttccatctgaggacggagaggttttc
gtgtttaataaatctaaaatgcgaactaattccgctccgccaggacctgaagagcttgag
ctatccgaaagtaattatcctgaccctccacggccgtgttcatctcatgatacccatccg
ttggatgaagcctctgatcctgctttaaaagcattaccgtcctatgagaggcaatttagg
taccattaccagctcggagatgcaatatacagacgcacccttgtgaagttcgatgcttgt
gagagactagcaagagagcaaatggttcaagagaaggcattggagattgctagggctaat
ttagaccatttctataagatgatcctccagaactacatggattttgtcaagtgttactcg
caacaacaaaggacacattctaatctgttggtgaatttcggacgggatttagagaggcta
aagtctattaagcttctacctgtgttacagactgttgataggaaatgcttattggatttt
gtgaaggaggataatctaagaaaaatggtggatgattgcagtaattctcaccggcaattt
gaaaataaagttggagactttaagcaggaatttggtgaattaaagagaagtactgagcat
ttgttttctagtaaagcttcaatcctcagtagagatttggggagaacagtcaaggagcat
gagcatcatatcaacgagcagaaaagtataatgcaagctttaagcaaagatgtcggtttg
gtgaagaagcttgtagatgatagtttgacgagtcaactctccagttctcttcgtccacat
gatgccgtttcagcattaggccctatgtacgagggccatgacaaaagttatctccccaaa
atgcaagattgtgaacgtgccatttccaacctccttatcttttgcaaaaacaaaaaatct
gaaatgaacaattttgttcacaaatacatgcaaaagattgcatacattcaatacacaatt
aaagacgtaaggtacaagttttctgtcttcaccgaagcactaaaacgacagaacgaccaa
tttgagcatttgaaagtagttcgtggaatcgggccttcatatagagcttgtctagcagag
atagtgaggagaaaagcgtcaatgaaactttatatgggcatggctggacaattagctgaa
cggctcgcaactaaaagggaatcagaaataagaagaagagaagagtttctaaaagtcaac
agttcatatattcctcgagacattttggcatcaatgggcttatatgatactcctaataca
tgtgatgtcaatgtagctccatttgatactaatttacttgatatagacatagcagacgtg
gaccgttttgccccagaacatttagttggtctttcttttaagaaggcgtcatcttcaatg
tctcaagatgttgaagaaagttctgaaagtgggaccggaaactataatgattttgttgag
ggttctgaaatggtggaaattgcaggaaccagcaagatggaagttgaaaatgcgaaatta
aaagctgaacttgcttctactatagctctgctttgttctttttcacctgaaactgatttc
gaagatagtgaagtgggaaatgtgctaaaagtagctgctgaaaagactgccgaggcattg
cgtttgaaagatgaacacgagaaacatttgctaaatatgttaaaagtcaaacaaatgcag
tgtgaatcgtatgagaaacgaataaaagagcttgaaaataggctgtctgaccagtattgt
ttagaacacaaacttaataaagatgaatctatacgttgtgcatcatccgagcctatggat
gaggcttcttatgcttctagttcattacttttgaaatcgggaggtaatgattcttctgga
actatgaatcctaacatggactcatcaatggtggaaccgaaccgtgatgaaaaagatgac
aaggagacaatggtaacagatgtggggatggtgttggccactagttcaactgctgattac
atgcctgggcctctgataactgtgacttcagatgaacaggtcaaatctagtggtgaactt
gtggtggagttgcaaaacttgcttactgagaaattgaatcaggtagatgaaatagaagcc
aagctccaggctgcattggaggaggtaacaaggctgggtagtgagctggaaaccagtcgg
aatcttctggatgaatctcagatgaattgtgctcacttagagaactgtctacatgaagca
agagaagaggctcaaactcatctctgtgcagccgaccgtagggcatctgaatatactgca
ttgcgcacatctgctgtcaaaatccgcagcctttttgaaaggctgaaaacatgtgtttcc
tcagctggtgtgaataatttggccgagtccctgctagctttggctcaatctcttgccaat
tctgcaaatgagaatggggatgacggtacttccgacttccgtgaattcgttcgggtactc
gctgagaaggttggtattttgactagacgacgagctgagctgatggataggtacacaaag
aaagaggcggaattgggagaaaagaaagaattggtcaacactttatacacaaagcttcaa
tctgaaaaacaggttaacaaggagaaaatatcatttggtcgtttggagcttcacgagata
gctgcatttgtacttaatgtagctggacactatgaggccatcaaccgaaacagcactcac
tactatttatcttcagagtcagttgccttattcactgaccatcttccacaccggcccacc
tacattgcaggccagattgtgcatattgaaagacaaactgtgaaatcgtcacctgttcga
gctgaacgaaccaccaccacctcgagccagtttgctttgaattcaggatcaaatggtgca
aacccgtatggtttacctgttggctgcgagtattttgtggtgacagtagccatgttacca
gatactaccattcattcgcccactgctgcttcctga
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integrated database retrieval system
