Erigeron canadensis (horseweed): 122598424
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Entry
122598424 CDS
T07610
Name
(RefSeq) dnaJ homolog subfamily C GRV2
KO
K09533
DnaJ homolog subfamily C member 13
Organism
ecad
Erigeron canadensis (horseweed)
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ecad03041
]
122598424
03110 Chaperones and folding catalysts [BR:
ecad03110
]
122598424
Spliceosome [BR:
ecad03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122598424
Chaperones and folding catalysts [BR:
ecad03110
]
Heat shock proteins
HSP40 / DNAJ
122598424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
122598424
NCBI-ProteinID:
XP_043626953
LinkDB
All DBs
Position
4:38277160..38295300
Genome browser
AA seq
2554 aa
AA seq
DB search
MDFVFRHSTDHNNTHEASTSSPRTATTAVHPPPPLPTLSLEEPEYLCRYLVIKHSWRGRY
KRILCISYDNIVTLDPGTLSVTNSYDVGSDFEGASPIIGKDENSLEFNVSVRTDGRGKFK
GMKFSSRYRASILTELHRIRWSRIGTVAEYPVLHLRRKTAEWAPYKLKVTYVGVELVELK
SGDLRWCLDFRDMDSTAIILLSDAYGRKNAEPGGFILCALYGRKSKAFQASPGTSNSAII
ASLTKTAKSTVGVSLAVESSQSLTVNDYLQRRAKDGVGAEETPCGGWSVMRLRTAAHGTL
GTPPSGLVVGPKGGLGEQGDAVSRQLILTKVSLVERRPENYEAVIVRPLSSVSSLVRFAE
EPQMFGIEFNDGCPVHVYSSTSRDGLLAAVRDMIQTEGQCSVPVLPRLTMPGHPIDPPCG
RAHLQLQQVTGRPQRAIADMETAAMHLKHMAAIAKDAVAEGGSVPGSKAKLWRRIREFNA
CIPYAGVPHNIEVPEVILMALITLIPAVPNLPPESPPLPQPSPKAAATFIGFVSCLRRLL
ASRTATSHVMAFPAAVGRIMGLLRNGSEGVAAEAAELIAVLIGGGPGDNNVLTDSKGDYR
ATIMHTKSVLFAQQGNLVVLVNRLKSMSVSPLLSMSVVEVLEAMICDPHGETTDISVFVE
LLRQVAGLKRRLFALFGHPAESVRETVAVIMRTIAEEDAIAAESMRDAALRDGALLRHLS
SAFFLPSGERREVSRQLVSLWADSYQPALDLLSRVLPPGLVAYLHTRSEGDVTEDYSYQE
GSLMSSRRRRLLQQRKSHAVKGATSPRDTLSPVTNYDASDHPSAVYTGENISSALAGDHS
AGVASPDASLAGENPPLESVSNLVDLDALPNSDLTAPAQVVVENTPVGSGRLLLNWPEFW
RAFSLDHNRADLIWNERTRQELRGALQAEVHKLDVEKERTEDIVPGSSSSESNGQDSLPQ
MSWNYTEFSVRYPSLSKEVCVGQYYLRLLLESGSNSRTEKFPLRDPVAFFRALYHRFLCD
ADTGLTVDGAVPDELGASDDWCDMGRLDGFGGGGGFSVRELCARAMSIVYEQHHNTIGPF
EGTAHITVLLDRTDDRALRHRLLLLLKVLMKVLLNVEACVLVGGCVLAVDLLTTVHEVSE
RTVIPLQSNLIAASAFMEPLKEWLFIDKDGVQAGPVEKDAIRRFWSKKTIDWTTKCWSSG
MPDWKRLRDIRELRWALAGRVPVLTPPQVGEAALSILHSMVSAHSDIDDAGEIVTPTPRV
KRILSSSRCLPHIAQAMLSGEPAIVEVSAALIKAVVTRNPKAMIRLYSSGVFYFALAYPG
SNLVTIAQLFFTTHVHQAFHGGEEAAVSSSLPLAKRSVLGGLLPESLLYVLERSGPTAFA
AAMVSDSDTPEIIWTHKMRAENLIHQVLQHLGDFPQKLSQHCHCLYDYAPMPPVTYPELQ
DEMWCHRYYLRNLCDEIRFPNWPIVEHVEFLQSLLVMWREELTRKPMDLSEEEACKILQI
SLSDVTRDESEGGYSTGNVDDDSSLSKKIENIDEEKLKRQYRKLAMKYHPDKNPQGREKF
LAVQKAYERLQATMQGLQGPQPWRLLLLLKGQCILYRRYGDVLEPFKYAGYPMLLNAVTV
DSDDTNFLSLERAPLLVAASELTWLTCVSSSLNGEELVRDGGIQLLATLLSRCMCVVQPT
THGNEPSTIIVTNVMRTFSSLSQFESARTEVLELSGLIEDIVHCTELELAPEAVDASLQT
IAHLCVSSELQNALLKAGVLWYLLPLLLEYDSTVEEPDTTEAHGVGVSVQAAKNLHAVQA
AHALSRISGLTAASPTPYNQEAADALKALLTPKLCSMLKEELPKELLIKLNSNLELPEII
WNSSTRAELLKFVDQKRAALAPDGSHSLNDSHGFSYEALSKEIRIGNVYLRVYNDQPEFE
ISEPESFCVALVEFISTIVRNQFATEPDTHIIGSNHKTPELESNHDSKDDPTDNNVTSSD
GNLTRKDDLGMVGNLQLGLISLQNLLTSDPNLASVFSSKEKLLPLFECFSVPVPSGSNIP
QLCLSVLSRLTTHAPCLEAMVADGSSVLLLLQMLHSAPNCREGVLHVLYALASTPELAWA
AAKHGGVVYILQLLLPLREEVPLPQRAAAASLLGKLVAQPMHGPRVAITLARFLPDGLVS
IIRDGPGEAVVSALEQTTETPELVWTPAMAASLAAQVATMASDVYQEQMKGRVFDWDVPE
QASSQQELRDEPQVGGIYVRLFLKDPKFPLRNPKRFLEGLLDQYLSSIAATHHNTQGPDP
ELPLLLSAALVSLLRVHPALADHVGYLGYVPKLLSAVAFEARRETMSSEESRMPDSRFEG
EENPSQGSQTPQEKVRLSCLRVLHQLAASTTCAEAMAATSVGTTQVVPLLMKAIGWQGGS
ILALETLKRVVVAGNRARDALVAQGLRVGLIEVLLGLLDWRAGGRNGLCSQMKWNESEAS
IGRVLAIEVLHAFATEGAHCTKVRDILDSSEVWAAYKDQKHDLFLPSNAQIASAGIAGLI
ENSSPSRLTYSLTAPPPHPNSSKPPAITSESNGS
NT seq
7665 nt
NT seq
+upstream
nt +downstream
nt
atggattttgttttccgtcactcgactgatcacaataacacgcacgaagcgtccactagt
tcgccacggacggctactacggccgtccatccaccgccgcctcttccgacgttgtcgttg
gaagaacctgagtatttgtgtcggtatttagttatcaagcattcatggagagggaggtat
aagaggatattgtgtatatcgtatgataatatcgtgacgttagatcctgggacgttgtcg
gtaactaatagttatgatgttgggagtgattttgaaggtgcgtctccaattataggcaaa
gatgagaatagtttggagtttaatgttagtgtgaggacggatggacgtgggaagtttaaa
gggatgaagttttcgtctaggtatagagcgagtattttgactgagttgcatagaataagg
tggagtagaattggtacggttgctgagtatcccgtgcttcatcttcggagaaagactgct
gaatgggccccgtataaactcaaagtgacctatgttggagttgaacttgttgaattaaaa
tctggagatttacggtggtgtctggattttagagacatggactcaactgctattattctt
ctttccgatgcgtacgggagaaaaaatgctgagcccgggggttttattctctgtgcactt
tatggaagaaagtcaaaagcctttcaagcgtctccagggacttcaaattctgctatcata
gcaagtttgacaaaaaccgcaaagtcaacagttggagtgtcactagctgttgaaagttcc
caatcactaactgttaacgactatttacaacgaagggctaaagacggcgtgggagcggaa
gaaactccttgtggaggttggtctgttatgagactacgaactgccgcccatggaacactt
ggcacaccaccatcgggtttggtagttggaccgaaagggggacttggggaacaaggggat
gctgtatctcgtcaacttattttgacaaaggtttcacttgtggagagacgtccagaaaac
tatgaggctgttattgtccgtcctttatcttcagtgagttctcttgttcgatttgctgag
gaaccacagatgtttggtattgaattcaatgatggatgtccagttcatgtatattctagc
acttccagagatggtttacttgcagcagttcgggatatgatacaaactgagggtcagtgt
tcagtgcctgttctgcccaggcttactatgccaggtcatccgattgatcccccatgtggc
agagctcatttacagcttcaacaagtaaccggtaggccacaacgtgcaatagctgacatg
gaaactgccgctatgcatttaaaacatatggccgcaatcgccaaagatgctgtggctgaa
ggaggttctgttcctggatcaaaagctaaactttggagaagaataagagaattcaatgca
tgcattccatacgctggcgtccctcacaatattgaagtccctgaagtaattttaatggct
ttaattacattaatcccagctgttccgaatctgccaccagagtctcctcctctgccacaa
ccttctcctaaagcagctgctacttttatagggttcgtttcttgtttaagaaggttattg
gcatcaagaaccgccacctcacacgtgatggcatttcctgctgctgttgggagaattatg
ggtttgttacgaaacggttctgaaggggtagcggctgaagctgcagaacttatagcggtc
cttattggcggtggtcccggggataacaacgtattaacagactcaaaaggtgattatcgt
gctacaatcatgcacacaaagtctgtgttgtttgctcagcagggtaatcttgtagttttg
gttaaccgattgaaatcgatgtctgtttcaccactgctatcaatgtcagttgtggaggtt
ttggaggcaatgatatgtgacccacatggtgaaactacagatattagtgtttttgttgaa
ttattacgccaggttgcggggttaaaacgtcggttgtttgcattatttgggcaccctgca
gaaagcgtgcgggaaacagtggcagtgattatgcggacaattgcagaggaagatgcaatt
gcagcagagtccatgcgtgatgctgcattacgtgacggtgctttattgaggcatttgtca
agtgcttttttcctaccttccggtgaaagacgagaagtaagtcgacagcttgtgagcctt
tgggcagactcttatcaacctgctctcgatttactatctcgagtattgccaccaggcctg
gttgcgtatttacacactcggtctgaaggagatgttactgaagattattcttatcaggaa
ggctcattgatgagtagtagaaggagacgtttacttcaacaaagaaaaagtcatgcagta
aaaggtgcaacatcacctagagatactctgtcccccgttaccaactatgatgctagtgat
cacccctcggcagtttacacaggtgaaaacatatcaagtgcattggctggtgatcattct
gcaggtgttgcttctccggatgcatcattggcgggtgaaaatccaccacttgaatcagtt
tctaatttggtcgatttggatgcgttgccgaactcagatcttacggctccagctcaggtt
gttgtagagaatacgccggtcgggtccggaagattgctattgaactggcctgaattttgg
cgggcttttagtcttgatcataaccgtgctgatttgatttggaatgagcggacccgtcag
gaattgcgtggtgcattgcaggctgaggttcataaacttgacgtggaaaaggagcgaact
gaagatatcgttcctggaagttcgtcttcagaatcgaatggtcaagatagtcttccccag
atgtcatggaactacaccgagttctcagtcagatatccgagcttatccaaagaagtttgc
gttggtcaatattatttgcggttgctgcttgagagtggaagcaattcacggacagaaaag
tttcccttgcgagacccagttgcattttttcgagctttgtatcatcgctttttgtgtgat
gcagacacgggacttactgttgatggcgcggttcctgatgaattgggagcttctgatgat
tggtgtgatatgggaagactagatggttttgggggtggtggcgggttctctgttcgagag
ctttgtgctagagcaatgtcaattgtatatgagcaacatcataataccataggcccgttt
gaaggtacggcacatattacagttctgttggacaggactgatgatagagctttgaggcat
cgactgctgctgcttcttaaggttttaatgaaggttttattgaatgtggaggcttgtgtc
ctggttggcgggtgtgtcctggcagtcgatttactgacaactgttcatgaagtttcagaa
aggacggttattcctttgcaatctaatttgatagctgcgtctgctttcatggaacctttg
aaggaatggttattcattgataaggatggtgtacaagctggcccagtggagaaagatgct
atcagaaggttttggtcaaagaaaactattgattggacaacaaagtgctggtcttctggg
atgcctgactggaagaggttgcgtgatattcgtgaacttcgctgggctcttgctggccgg
gttcctgtcctcactcctccccaggtaggtgaagcggcattgtctatattacacagcatg
gtatctgcacattcagatatagatgatgcaggagaaattgttaccccaactcctagagtt
aaaagaatcttatcaagttcacgttgtcttccccatattgcccaggccatgctttctggg
gaaccagctattgttgaggtttctgctgctctgataaaagccgttgttactagaaacccc
aaggcgatgattagactatacagtagtggtgtgttttattttgctttggcatacccggga
tctaatctcgttactattgcacaactcttcttcaccacccatgttcaccaagctttccat
ggtggtgaggaagcggcagtttcttcatcattgcccttggccaagcggagtgtgcttggt
ggtcttctacctgagtctttactgtatgttctcgagcgtagtggtccaactgcattcgct
gcagctatggtttctgattccgacactcccgagataatatggactcacaaaatgcgggca
gagaatctcattcatcaggttttgcaacatcttggtgatttcccccagaagttatcccag
cattgtcattgtttatatgattatgctcctatgccaccagttacatatcctgaactccaa
gacgaaatgtggtgccatagatattacctccgtaacttatgtgacgagattcgatttcct
aattggcctattgttgaacatgttgagtttttacaatcattgcttgtaatgtggcgtgag
gaactaacaagaaaaccaatggatctttctgaggaagaagcttgtaaaatattacagatc
tctctaagtgatgtcacgagagatgaatctgagggtggttactcaaccgggaatgtagac
gatgattctagtctatcaaagaaaattgagaacattgatgaagaaaaacttaagagacag
tacagaaagcttgcaatgaaatatcatcctgacaaaaatcctcaaggaagagagaagttt
cttgcagttcagaaagcatatgaacgtctacaagcgacaatgcaaggtttgcaaggcccg
caaccatggaggttgctgcttttgctcaagggacagtgcattctatatagacggtatgga
gatgtcttggagccatttaagtatgctggatatccaatgctattaaatgctgtgacagtc
gatagtgatgacaccaatttcttatccttggaacgtgcacctttacttgttgctgcctcg
gagctgacctggctcacgtgtgtctcttcttcattgaatggtgaagagcttgtgagggat
ggaggcatacaacttttagccacacttctttcacgatgcatgtgtgtggttcaaccaact
actcatggaaacgaaccatctactattattgtaacgaatgtaatgcggacattttctagc
ttgagccagtttgagagtgctagaactgaagtacttgagttatctgggttaattgaagac
attgtgcactgtaccgagttagagctcgcaccagaagctgtagatgcatctcttcagacc
attgctcatctttgtgtgtcctctgaattacaaaacgctttgttgaaggccggagtgctg
tggtatctgctacctttgctgcttgaatatgactcgactgtagaagagccggataccaca
gaggcacatggagttggtgttagtgtgcaagctgctaaaaatttgcatgcagttcaagct
gcacatgctttatcaaggattagtggcttgacagctgcaagtccaacaccttataaccaa
gaggcagctgatgctcttaaagctcttttaactcctaaactttgcagcatgctcaaagaa
gagctaccgaaggagctcttgataaaattaaactcgaatttggagttacctgagattatt
tggaattcatcaacccgagcagagctattgaagtttgtagaccagaaacgtgcagcttta
gcacctgatggttctcatagcttgaatgattcacatggtttctcatatgaagcgctatca
aaagagatccgcattgggaatgtgtatctaagggtctataatgatcagcctgaatttgag
ataagtgaaccagaatctttttgtgttgctcttgtcgaatttatatcgaccattgtacgc
aatcagtttgctactgagcctgatacacatataattggctcaaatcacaagacaccggaa
cttgaaagcaatcatgatagcaaagatgaccccacagataataatgtaacatcatcagat
gggaacttaacacgcaaggatgatttaggcatggttggcaaccttcaacttgggctgatt
tctctgcagaatttgctaacaagcgatcctaatttggcatccgtgttttcttcaaaagaa
aagttattacctctttttgagtgcttttctgtgccggttccatccggaagcaacattcca
caattatgtttgagtgtcttgtcacgtttaaccacacatgctccttgcttggaggctatg
gtagcagatgggtctagtgttcttttattgctacaaatgctccactctgcccctaattgt
cgtgaaggggttctccatgttctctatgccctggcaagcacaccagaacttgcatgggca
gctgccaagcacggtggagtcgtctacattcttcaactcctcctccctttgcgtgaagaa
gtcccactacctcaaagagcagcggctgcctctttgttggggaagcttgttgcacaacca
atgcatgggcctagggtggcaattacacttgccagatttttgccagatggattggtatca
attattagggacggtcctggtgaggctgttgtgagtgctcttgaacaaactacagaaact
ccagaacttgtatggacaccagcaatggctgcttctttagctgcacaagttgcaacaatg
gcttctgatgtttaccaggagcagatgaaaggccgtgtgtttgattgggatgtacctgaa
caagcatctagtcaacaagaattgagagatgagcctcaggttggaggaatctacgtgagg
ctattcttgaaagatccaaagttcccgcttagaaacccaaagagattcttggaaggattg
cttgatcagtatctttcatcaattgctgctacacatcataacactcaagggcctgatcca
gagcttccactactcctatctgctgccttggtatctttgttgcgggtccaccctgcactg
gcagatcatgttgggtatctgggttatgtgcctaagttgttatctgctgtggccttcgag
gcaagacgtgaaacaatgtcttcagaagaatctagaatgccagattcccgctttgaaggt
gaggagaatccatcacaaggatcacaaacccctcaagagaaggtccgtcttagctgctta
cgggttttgcatcaactagcagctagcacaacatgtgcagaagctatggcggcaactagt
gttgggacaacccaggttgttccactattaatgaaagcaattggatggcaaggtggaagc
atactagcacttgagacactaaaacgtgtggtagttgctggaaatagagcaagggacgca
cttgttgcacaaggactcagggttggactcattgaagtgctgcttgggcttcttgattgg
agagctggagggagaaatggactttgctctcaaatgaaatggaatgaatctgaagcatcc
attgggcgggtgcttgcaattgaggttttgcatgcatttgcaacagaaggagcgcactgt
actaaagttcgtgacatactagattcttccgaagtttgggcagcttataaagaccagaag
catgatcttttccttccttctaatgctcaaatagcaagtgctggaattgctggactaatt
gaaaactcttccccatcaaggcttacttattctttaactgctcccccccctcatcctaac
tcatcaaaacctcccgctatcacatccgagtcgaatggatcataa
DBGET
integrated database retrieval system