Erigeron canadensis (horseweed): 122600372
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Entry
122600372 CDS
T07610
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122600372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122600372
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122600372
DNA repair and recombination proteins [BR:
ecad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122600372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122600372
NCBI-ProteinID:
XP_043629013
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Position
5:complement(4553414..4557731)
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AA seq
368 aa
AA seq
DB search
MSGAPGVKSMNVTESEARSILGLTGNKSLSPVSRRKPVSKASKKIEMSPEEGMIGGKDRG
VAVSSPPFSSRGVPSILRRQVSLNASCSSDASTDSFQSRASTGRIYRTGSYTRGRRQLAS
KPKPVVIDSASEASPDDLHSKKRCSWVTSSSDQSYAIFHDEEWGVPVHDDKKLFELLVLS
GALSELTWPAILNKRHLFREVFADFDPIVVGKFNEKKLVGPGNAASSLLSELKLRAIVEN
ARQISKVIDEYGSFDKYIWSFVNHKPIVSRFRYPRQIPVKTPKADVISKDLIRRGFRCVG
PTVIYSFMQVAGITNDHLCSCFRFQECMLIAELEEVGSAKVKESEQKTDEGIESCICNAI
EDLNFSSG
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagctccaggggttaagtctatgaatgtgacagaatcagaagcaagatcgatt
cttgggcttacgggaaataagtctcttagtccagtaagtagaagaaaacctgtgtcaaaa
gcgtcgaaaaagattgagatgtcaccagaagaggggatgataggggggaaagatagaggg
gttgcagtatcatcgcctccttttagttctaggggcgttccttcgatattgcgtagacag
gtttcacttaatgcgtcatgttcttcggatgcatctactgattcatttcaaagtcgggcg
tctactggtaggatttatagaacaggtagttatactagaggtaggaggcagttggcttca
aaaccaaaaccggtcgttattgatagtgcttcggaagcttcacctgatgatttacattcc
aagaaaaggtgttcttgggtaacatcaagttcagatcaatcctatgccattttccatgat
gaagaatggggggttcctgtacatgatgacaaaaaattatttgagcttcttgtgctttcg
ggggcgttatcggaacttacatggcctgctatcctcaacaaacgacatctttttagggaa
gtttttgctgattttgatcctatagttgtcgggaaattcaatgagaagaaactagtaggt
cccgggaatgctgcaagctctttgctttcagagcttaaactgcgggccatagtcgaaaat
gctcgccaaatatctaaggtcatagatgaatatggatcattcgacaaatacatctggagc
tttgtgaaccataaacccatcgttagtagatttcgatacccccgacagatccctgtgaaa
acccctaaagccgacgtgattagcaaagacctcataaggagagggtttcgttgtgtgggt
cccacggtcatctattcattcatgcaggtggcgggtataactaatgaccatctttgtagt
tgttttagatttcaggaatgcatgttgattgcagaattagaggaagttgggtcagccaaa
gttaaagaaagtgaacagaaaaccgatgaaggaattgaatcttgcatatgcaatgcaatt
gaggacttgaatttctcttccgggtaa
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