Erigeron canadensis (horseweed): 122601563
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Entry
122601563 CDS
T07610
Name
(RefSeq) ABC transporter B family member 20-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122601563
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122601563
04147 Exosome [BR:
ecad04147
]
122601563
04090 CD molecules [BR:
ecad04090
]
122601563
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122601563
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122601563
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122601563
CD molecules [BR:
ecad04090
]
Proteins
122601563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_22
AAA_23
AAA_16
RsgA_GTPase
HupE_UreJ
DUF87
AAA_30
Motif
Other DBs
NCBI-GeneID:
122601563
NCBI-ProteinID:
XP_043630252
LinkDB
All DBs
Position
1:complement(30082353..30094337)
Genome browser
AA seq
1397 aa
AA seq
DB search
MVPRGGLFGWSPPRQQPLTPVSEVSEPPESPSPYMDASTDAVAPEVDDVDEEMEEIEPPP
EAVPFSRLFACADKLDWVLMFVGSVAAAAHGTALVVYLHYFAKIIHLLSHDDDSPDLLFH
RFKELALTLVYIAGGVFAAGWIEVSCWILTGERQTAVIRSRYVQVLLNQDMSFFDTYGNN
GDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLAIGFINCWQIALITLATGPFIVAA
GGISNIFLHRLAENIQDAYAEAASVAEQAISYIRTLYAFTNETLAKYSYAASLQATLRYG
ILISLVQGLGLGFTYGLAICSCALQLYVGRFLVTHGKAHGGEIVTALFAVILSGLGLNQA
ATNFYSFEQGRIAAYRLFEMISRSSSTVDHNGNMLDSVQGNIEFRNVYFSYLSRPEIPIL
SGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNLKLEWLRNQI
GLVTQEPALLSLSIRDNIAYGRDASQLQIEDAAKIAHAHTFISSLEKGYDTQVGRAGLSL
SEEQKIRLSVARAVLSNPSILLLDEVTGGLDFEAEKSVQEALDLLMLGRSTIIIARRLSL
IRNADFIAVMEEGQLMEIGTHDELIASDGLYAELLRCEEAAKLPRRMPVRTYETATFQIE
KDSSASHSYQEPSSPKFAKSPSLQRASNLHASARSPDSAYNSHESPRNLSPGEKTVENGS
YMDDKQPSIKRQDSFEMRLPELPKIDVHSIQRQASHGSDPESPVSPLLTSDPNNERSHSQ
TFSRPNSQFGDDPVKVKAVKEKQKRKEPPMWRLIELSFAEWLYAVLGSTGAAIFGSFNPL
LAYVIALIVTEYYRNESRGHMRREVDKWCLIIACMGFVTVIANFLQHFYFGIMGEKMTER
VRRMMFSAMLRNEVGWFDEEENSADTLSMRLANDATFVRAAFSNRLSIFIQDCTAVLVAI
LIGMLLQWRLALVALATLPVLTLSAIAQKLWLAGFSKGIQEMHRKASLVLEDAVRNIYTV
VSFCAGNKVMELYRLQLRKIFTKSFLHGMAIGFGFGLSQFLLFACNALLLWYTALSIKNG
HVDLPTAIKAYMVFSFATFALVEPFGLAPYILKRRKSLISVFEIIDRVPKIEPDDVTALK
PPNVYGSIELRNVDFSYPTRPEILVLSNFSLKVNGGQTVAVVGVSGSGKSTIISLIERFY
DPVAGQVILDGRDLKQFNLRWLRNHLGVVQQEPIIFSTTIRENIIYARHNASEAEVKEAA
RIANAHHFISNLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKNAPILLLDEASSSIESE
SSRVVQEALDTLIMGNKTTILIAHRAAMMRHVDNIVVLNGGRIVEEGAHDSLMSKNGLYV
RLMQPHFGKGIRQHRLI
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atggtaccaagaggaggattattcggctggtcgccgccgcggcaacagccgttaacgccg
gtatcggaagtatcggagccgccggaatcgccgtcgccgtatatggatgcaagtacggat
gcggtggcgccggaagttgatgacgtggatgaggaaatggaagagatcgagccgccgccg
gaagctgtgccgttttcgagattgtttgcttgtgctgataagcttgattgggtgcttatg
tttgttggatcggttgcagctgcggcgcacgggaccgcgcttgtcgtttacttgcattat
tttgcgaaaattattcatttgcttagtcatgatgatgatagtccggatttgctgtttcat
cgcttcaaagagcttgctctgacccttgtctatattgctggcggggtttttgctgctggt
tggatagaggtttcatgttggattcttaccggagaaagacagactgctgtaattagatct
agatatgtccaagtgcttctaaatcaagatatgagtttctttgacacctatgggaataat
ggcgatattgttagtcaagtgttgagtgacgtattgctcattcaatctgctcttagtgag
aaagttggtaattatattcataatatggctacattctttagtggtcttgctattggattt
atcaactgctggcagattgccctcataactctagccaccggtccgtttatcgttgctgct
ggaggaatctcaaatatatttcttcatcgacttgctgagaatattcaagatgcttatgct
gaagcggctagtgttgctgaacaggcaatttcatacattaggactttatatgcgtttaca
aatgaaaccttagcaaagtattcttatgcggcctcactacaagctacattgagatatggg
atactgatcagtcttgtgcaaggacttgggcttgggttcacatacgggcttgcaatttgt
tcttgtgctctgcaactgtatgttggaagatttctagttacacatggaaaagctcatggt
ggtgagatcgtgacagctttgtttgctgtaattctaagtggcctcgggttgaatcaagca
gctacaaacttttattcatttgagcaagggagaattgctgcatatagacttttcgagatg
attagccgttcatcctccacagttgatcataatggaaacatgcttgattctgtacaaggg
aacattgaattccgaaacgtatatttcagttatttgtctcgtcctgaaatccctatttta
agtggcttttacctcactgtccctgccaagaagaccgtggcacttgttggaagaaatggc
tctggtaaaagtagtatcattccactcatggaacggttttatgatcctacattaggggaa
gttcttttggatggcgagaacatcaagaacctgaagttagagtggctaaggaatcaaatt
ggtttagtcactcaagagccggccttgctaagcttgagtattagggataatattgcctat
ggcagagatgcttctcaactgcaaatcgaagatgcagccaaaattgctcatgcacatacg
ttcataagctcccttgaaaaaggatatgatacacaggtaggtagggctggtttatcattg
tcagaggaacagaagataagactttctgttgccagggcagttctatccaacccatctatt
cttcttcttgatgaggtcactggtggactggattttgaagctgaaaagtcagtacaggag
gctttagatctcttgatgttaggtcgttcaaccatcataattgctcgtcggctttcttta
attagaaatgctgattttattgctgtgatggaggaaggtcaacttatggagatcgggacc
catgatgaactgatagcatcagatgggctatatgcagaactcctaagatgtgaagaagca
gctaaactcccaagaaggatgcctgtgagaacctatgagacggcgacttttcaaattgaa
aaggattcatctgcaagccacagctatcaagaaccatcatctcccaaatttgctaaatca
ccatcacttcaaagagcatccaacctacatgcatcagcgaggtctcctgattctgcttat
aattcgcatgaatctcccagaaacctgagccctggtgaaaaaacagttgaaaacggttca
tacatggacgacaaacaaccttcaattaagaggcaagatagcttcgagatgagacttccc
gagttaccaaagattgatgtccattctattcagagacaagcatctcacgggtcagatcct
gaatcacccgtctcgccacttttaacatctgatcctaataatgagcgctctcattcgcaa
acttttagtcgacctaattctcagttcggtgatgatcctgtcaaagtcaaagcagtcaag
gagaagcaaaaacgaaaagagccacctatgtggaggcttattgagctgagttttgctgaa
tggctttatgctgttcttggaagcactggtgctgcaatctttggttcttttaacccgctt
cttgcctatgtgattgcattaattgtgacagaatactacagaaatgagagtaggggacac
atgcggcgtgaagtggataaatggtgtttaatcattgcctgcatgggttttgttactgta
atagcaaactttttgcagcatttttacttcggtatcatgggggagaagatgacagagcga
gttaggagaatgatgttttctgcaatgctccgaaacgaagttggatggtttgatgaagaa
gaaaacagtgctgatacattatccatgcgattggcaaatgatgctacatttgtgagagcg
gctttcagcaaccggctttctatattcatacaagattgtacagccgttcttgtcgcaatt
cttatagggatgcttctgcagtggcggttggcactagtggctttagccacacttccggtt
cttactctttcagccatagctcagaaactatggctcgcgggattttcaaagggaatacaa
gagatgcacaggaaagcatcattggtccttgaagatgcagttagaaatatttatacagtt
gtgtcgttctgtgctggtaacaaagtaatggagctttacagattgcagttacggaaaata
ttcacaaaaagctttttgcatggtatggctattggttttggttttgggttatcacagttt
cttctcttcgcctgcaatgcgcttcttctttggtacactgcactttctataaaaaatgga
catgtggatctcccaactgccattaaagcgtacatggttttctcttttgccacatttgcc
cttgtggagccattcggtttggctccatatattttaaaaagaagaaagtctctcatttcg
gtcttcgaaataatagaccgagtccctaaaattgagcccgatgacgtcactgctttgaag
cctccaaatgtttatggaagtatcgagttgagaaatgttgacttttcttatcctacacgt
cccgagattcttgtgcttagcaatttcagtcttaaagtcaacggtgggcaaactgttgcg
gttgtgggtgtttcgggatcaggaaaaagcacgatcatttctttgatagagagattttat
gatccggttgctggtcaggtgatcttagatggtagggatctaaagcagtttaatctaaga
tggttgaggaatcaccttggtgttgttcaacaagaaccgattatcttttcgactaccata
cgggaaaatataatttatgcaagacataatgcaagtgaggctgaagttaaagaggcagca
agaatagcaaatgctcaccattttataagtaatttgcctcatggttatgacacccatgtt
ggtatgaggggcgtagacttaaccccaggtcagaaacagcgcattgcaattgcacgtgtt
gtgcttaaaaatgctccaatcttgttattggacgaagcaagctcatctattgagtcagaa
tcgagtcgcgtggttcaagaagctctcgacacactgataatggggaataaaacaactatt
cttatagcccatagagctgctatgatgaggcatgtcgacaacattgttgtgcttaatgga
gggcggatagtcgaggaaggcgcacatgattctttaatgtctaaaaatggtttgtatgtt
cggttaatgcaaccacattttggaaagggtatccgtcaacacaggcttatttag
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