Erigeron canadensis (horseweed): 122602776
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Entry
122602776 CDS
T07610
Name
(RefSeq) ABC transporter B family member 15-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122602776
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122602776
04147 Exosome [BR:
ecad04147
]
122602776
04090 CD molecules [BR:
ecad04090
]
122602776
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122602776
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122602776
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122602776
CD molecules [BR:
ecad04090
]
Proteins
122602776
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
Zeta_toxin
AAA_16
AAA_22
AAA_21
ABC_ATPase
AAA_15
RsgA_GTPase
AAA_30
SbcC_Walker_B
AAA_23
DUF815
AAA_28
Motif
Other DBs
NCBI-GeneID:
122602776
NCBI-ProteinID:
XP_043631308
LinkDB
All DBs
Position
6:33289973..33295823
Genome browser
AA seq
1247 aa
AA seq
DB search
MSKLNRTDTNSRKVKNGSLRSIFMHADGADMVLMTLGFLGAVGDGISMPTMLLITSKIMN
NIGDSSSLSMDIFIDKMNQNAVNLCYMAIGIWVACFLEGYCWARTAERQASRLRSRYLKA
VLRQEVAYFDLNVTSTAEIITSVSSDSLVIQEFISEKVPMFLMNMSIFGGAYIVAFILLW
RLAIVGLPFIFLLVIPGLIYGKVLISLSRKIREEYNKAGNVVEQAISSIRTVYSFVGENK
AITEYSAALQGTVKLGLKQGLAKGVAIGSNGVVFAVWSFLSWYGSRLVMYHGASGGTVFA
VGAAIAIGGLSLGSGLSNVKYFSDAMAASERIREVIKRVPEIDSDNMEGEMLQEVCGDVE
FKHVSFAYPSRPESVIFKDFNLKVPAGLTVALVGGSGSGKSTVIALLQRFYDPQGGDICV
DGVKIDKLQLKWLRSQMGLVSQEPALFATTIKENILFGKEDATMEEVIEAAKASNAHNFI
SQLPQAYDTQVGERGVQMSGGQKQRIAIARAIIKSPRILLLDEATSALDTESERVVQEAL
DHAAVGRTTIVIAHRLSTIRSADIIVVVQDGQVVESGSHDDLIQVENGLYTSLVRLQETK
KNDEPPINPYLAGPSSVSSTFDVHNTSSRKLSLVSRSSSASSFNRCAVENLTLQANQEFP
VPSFKRLLAMNSPEWKEALLGSVSAVLFGAIQPLYAFALGSMISVYFLPDHDDIKHKTMI
YALCFVGLAVFSMVINIIQHYNFAAMGEQLTKRVRERMLSKILTFEIGWFDQDENSSGAI
CSRLAKDANVVRSLVGDRSALLIQTFSAVIIACTMGLVIAWRLALVMIAVQPLIIVCFYC
KRVLLKNMSQKAMKSQDESSKLAAEAVSNLRTVTAFSSQTRILKMLEETQKAPMRESIKQ
AWYAGIGLGFSQSLMACTWALDFWYGGKLISEGHLGSKALFQTFMILVSTGRVIADAGTM
TNDLAKGSDAVQSVFAVLDRYTLIEPEDPDGKKPEIITGHIEIRDVDFAYPARPDVMIFK
GFSINIQAGKSTALVGQSGSGKSTIIGLIERFYDPMKGVVKVDGRDIRSYHLRTLRKYIA
LVSQEPALFAGTIRQNIIYGASAEISESEIIGAAKAANAHDFIAVLKDGYDTWCGDRGVQ
LSGGQKQRIAIARAILKNPTVLLLDEATSALDSQSEKVVQDALERMMVGRTSVVVAHRLS
TIQSCDTIAVLEKGKVVEKGNHGSLLAKGPSGAYYSLVSLQKPTSTN
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattaaatagaacagatacaaatagtaggaaggtcaagaatggatcattacga
tcgattttcatgcatgctgatggtgctgatatggtgttgatgactcttggatttttgggt
gcggtcggagatggaatttcgatgccgactatgttacttatcactagtaaaatcatgaat
aatattggtgattcatcttctttatccatggatatcttcattgacaaaatgaaccagaat
gctgtaaatctttgctacatggctattgggatatgggttgcctgttttctagagggatat
tgttgggcaagaacggcagagaggcaggcatcaagattgagatcaaggtacttaaaagca
gttttaaggcaagaagtagcgtatttcgatttaaatgtcacaagcacagccgaaatcatt
actagtgtatctagtgatagccttgttattcaagaatttattagcgaaaaggtgccaatg
ttcttgatgaatatgtcaatatttggtggggcatatattgtagcatttatattactatgg
aggctagcaatcgttggccttccttttatttttcttttggttatacctggtttaatctat
ggaaaagttttaataagcttatcaagaaagattagggaggaatataacaaggctggtaat
gtggtcgaacaagccatttcttcgattaggacggtttattcgtttgtgggcgaaaataag
gctataacagagtactctgctgcccttcaaggcactgtgaagttgggtttaaagcaaggt
ttggctaaaggagtggcaattggaagcaatggtgtggttttcgccgtatggtctttcttg
tcttggtacggtagtcggttggtgatgtatcatggggctagcggagggaccgtgtttgct
gttggggccgcaatcgccatcggtggactatcgctcggttctgggttgtcaaacgtgaag
tacttttccgatgcaatggctgcaagcgaacgtataagggaagtgatcaaaagggttcct
gaaatcgattcagataacatggaaggggagatgttacaagaagtatgtggggatgtggaa
tttaagcatgtgagttttgcttacccatcaaggccagaatcagtgatattcaaagacttt
aacttaaaggttccagccgggttgaccgtggcattggttggtggaagcgggtcgggtaaa
tcaacagtgattgcgttgttgcaaaggttttatgatccccaaggaggtgatatttgtgta
gatggggtgaaaatcgataagcttcaactaaaatggctaagatcgcaaatgggtttggta
agtcaagagcctgctctattcgcgacgactataaaagagaacatacttttcggtaaggaa
gatgccactatggaagaagtcattgaggctgcaaaagcttcaaatgcacataacttcatc
tctcaactgcctcaggcttatgacactcaagttggtgaaagaggagtccaaatgtcaggt
ggacaaaaacaaagaattgcgattgctcgcgcaataatcaagtcgcctcgtatccttctt
ttggacgaggcaacaagtgcactcgatacagaatcagaacgagtggttcaggaagccctg
gaccacgcagctgttggtagaaccactattgtcattgctcaccgtctctcgactattaga
agtgcagacataatagttgtggtccaagatggtcaagtagtcgagtctgggtcccatgac
gacctcattcaagttgaaaatgggttatatacatcactcgttcgcctccaggaaactaaa
aaaaatgatgaaccacccattaacccatatctggctggaccatcttcagttagctcaaca
tttgatgtccacaacacgagtagtcgtaagctgtcattggtaagccggtcaagctctgct
agctcatttaaccgctgtgcagttgagaacttgactctgcaggctaaccaagaatttcct
gtgccgtcttttaagcgacttttggcaatgaacagtcctgaatggaaggaggcgttgtta
gggagtgtgagcgcggtactatttggtgcaattcaaccactatatgcttttgcattaggg
tcaatgatatctgtgtattttttgccagatcatgatgatatcaagcataaaactatgata
tatgcgttgtgttttgttggtttggcagttttctcaatggtaatcaatatcattcaacat
tataactttgcagccatgggcgaacagttaacaaaaagagtccgtgaaaggatgttgtca
aagatactcacctttgaaatagggtggtttgatcaggatgaaaattcaagtggagccatt
tgttcaagactcgcgaaagatgccaatgtggtgagatcattggtgggtgatcggagtgct
cttcttattcaaacattctcagctgtgattattgcctgcacgatgggattggtaattgct
tggagactggcattggtgatgattgcggttcagccacttataatcgtttgcttctattgc
aaacgggttttgttaaagaacatgtcacaaaaagccatgaagtcacaagatgaaagcagc
aagttagcagccgaagctgtttcaaatctacgcactgtcactgccttttcgtctcaaaca
cgaatcctcaaaatgttggaagagacccaaaaagcaccaatgcgtgaaagcatcaagcaa
gcttggtatgctggaatcgggcttgggttttctcaaagccttatggcttgtacttgggct
ctagacttttggtatggtgggaagttgattagtgaaggtcatttggggtcaaaagcgctt
ttccaaacatttatgatcttagtaagcacgggcagggtcattgcggatgcagggaccatg
acaaatgatctagctaaaggatctgatgcagtgcagtctgtgtttgcggtgttggaccgt
tacaccttgatagagcccgaggaccctgatggtaaaaagcctgagatcattacgggccat
atagagatacgtgatgtcgactttgcataccctgcacgtcctgacgtcatgatatttaag
gggttctccatcaatattcaagctgggaaatcaactgcattggttggacaaagtgggtca
gggaaatcaaccataattgggttaatcgagcgtttttatgatccaatgaaaggcgtggtg
aaagttgatggaagagatataaggtcataccatttaagaactctaaggaaatacattgca
cttgtgagtcaagagccagcattattcgctggtactatacgtcaaaacattatctacggg
gcatctgcagaaattagtgaatcagagatcataggggctgcaaaagcggccaatgctcat
gattttatagctgttttaaaagatgggtatgacacatggtgtggtgatcgcggagtacaa
ctctctggtggacaaaagcaacgcattgccatagcccgtgccatacttaaaaaccccact
gttttgttactagacgaagccactagtgcgttagatagtcaatcagaaaaagtagtacaa
gatgcacttgagagaatgatggtgggacggacaagtgtggtcgtggcacataggctgagt
accattcaaagctgtgacacaattgcggttttggagaaggggaaagtggtagagaaagga
aaccatggttcattgttagccaaagggccaagtggagcttactactcacttgttagtctt
caaaaacctacttctactaattaa
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