Erigeron canadensis (horseweed): 122602778
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Entry
122602778 CDS
T07610
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122602778
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ecad01002
]
122602778
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ecad04121
]
122602778
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122602778
Peptidases and inhibitors [BR:
ecad01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122602778
Ubiquitin system [BR:
ecad04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122602778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH
UCH_1
Malt_amylase_C
DUF6612
DUF2631
Motif
Other DBs
NCBI-GeneID:
122602778
NCBI-ProteinID:
XP_043631310
LinkDB
All DBs
Position
6:complement(36334901..36348054)
Genome browser
AA seq
1132 aa
AA seq
DB search
MTMVTPQPQLDQEDEEMLVPHTEGIRPVQGPVAFDGTPPIELPQPMEVMSQAEGASTGDN
QANEEPQTSRFTWTIENFSCQINKKLYSDPFVVGGYKWRVLIFPKGNNVDHLSMYLDVAD
SPSLQYGWSRYAQFSLAVVNQLHNKFTIKKDTQHQFNARESDWGFTSFMALSELYDPSKG
YLVNDTCIIEADVAVRKVIDYWTYDSKKETGYVGLKNQGATCYMNSLLQTLYHIPYFRKA
VYHMPTTENDMPSGSIPLALQRLFYKLQYHETSVATKELTKSFGWDTYDSFMQHDVQELN
RVLCEKLEDKMKGTVVEGTIQKLFEGHHMNYIECMNVDFKSTRKESFYDLQLDVKGCQDV
YASFDKYVEVEQLEGDNKYQAEEHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFTRDTMVK
INDRYEFPLELDLDRDDRKYLSPDADKSVRNLYTLHSVLVHSGGVHGGHYYAYIRPTLSD
QWFKFDDERVTKEDMKKALEEQYGGEEELPQTNPGYNNSPFKFTKYSNAYMLVYIRESDK
EKIICNVDEKDIAEHLRTRLKKEQEDKEDKRRYKAQAHLYTIIKVARDGDLLDQIGKDIH
FDLVDHDKVRSFRIQKQTPFNVFKEEVAKEFGVPVQFQRFWIWAKRQNHTYRPNRPLTPL
EEAQSVGHLREVSTKTHNAELKLFLEIEIGPDLLPLPLPDKSKEDILLFFKLYDPEKEEL
RFVGRFFVKSSGKPAEIISKLNERADFSPDEEIELYEEIKFEPHVMCERLDKRSSFRSSQ
IEDGDIICFQKLPQAKDEEKYRYPDVPSYLEYVKNRQIVNFRSLERPKEDDFYLELSKLH
TYDDVVERVAQKLNLDDPSKIRLTSHNCYSQQPKPHHIKYRVAEHLLDMLAHYNQVSDIL
YYEVLDIPLPELQCLKTLKVAFHHATKEEPTVHNIRMPKQSTVGDVLEEIKKRVDLSHPN
AELRLLEVFYHKIYKIFPLTEKIENINDQYWTLRAEEIPEEEKNLGPQDRLIHVYHFTKE
AAQNQMQVQNFGEPFFLIIHENETLADVKLRIKRKLEVPEEDFSKWKFAFLSLGRPEYLQ
DTDVVSSRFQRRDVYGAWEQYLGLEHSDTTPKRPFTTNQNRHTFEKPVKIYN
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgactatggtcactccacagccacagctagatcaagaggacgaagagatgctcgtgccg
catacggaggggattcgtccggttcaaggtcctgttgcttttgacggcactccgccgatt
gaactacctcagcctatggaagttatgagtcaagctgaaggggctagcacaggagataat
caagcaaacgaggaacctcagacatctaggtttacatggactatcgagaatttctcttgc
caaatcaataaaaagctctattctgatccctttgtggtcggtggatataaatggcgtgtg
cttatatttccaaagggaaacaatgtggaccatttgtctatgtatctagatgtggctgat
tcgccatccttgcaatatggttggagtagatatgcacaattcagtttggctgttgttaat
caattgcacaataagttcactataaagaaagacacacagcaccagttcaacgcaagggag
agtgactgggggttcacatctttcatggctcttagtgagctatatgacccaagtaaaggg
tatcttgtgaatgatacatgcattattgaagctgatgttgctgtccggaaagtgatcgac
tattggacgtatgactcaaagaaggagactggttatgttggtcttaagaaccaaggagca
acatgttacatgaattcccttcttcaaaccttgtaccatatcccttacttcagaaaggcc
gtctaccatatgccgacaacagaaaatgatatgccatctgggagtattcctttggctctt
cagcgcttattttataagctccaataccatgaaacaagtgttgcaacaaaagaacttaca
aaatcttttggatgggacacatatgattctttcatgcagcatgatgtccaagaacttaat
agggtcttgtgtgagaaacttgaagacaagatgaagggaacagttgtagaagggacaatt
cagaagttgtttgaaggacaccatatgaattacattgaatgcatgaatgtggacttcaag
tcgacaagaaaagagtcattttatgatcttcaacttgatgttaaaggctgtcaggatgtt
tatgcttcatttgacaaatatgttgaagtggaacagttggagggggacaataaataccaa
gctgaagaacatggattacaggatgctaagaaaggagtgctatttattgatttcccacct
gttcttcaacttcagctaaagcgtttcgagtatgatttcactagagatacaatggtaaag
ataaacgatcgttatgaatttccgctggagctcgaccttgacagggatgacagaaaatat
ctatctcctgatgctgataagagtgtccgaaatctttatacacttcacagtgtattggtt
catagtggcggtgtgcatggtggacactattatgcatatatcaggcccactctgtcagat
caatggttcaagtttgatgacgaaagagttactaaagaagatatgaagaaggcattagaa
gaacagtatggtggcgaggaagagctaccccagacaaatcctggctacaataattctcca
tttaaatttacaaagtactcaaacgcctacatgcttgtctacatacgcgaaagtgacaaa
gagaagattatttgtaacgttgatgagaaagatattgcagaacatcttaggacaaggtta
aaaaaagaacaagaagataaggaagacaaaagaagatataaagcgcaggctcatctctac
actattattaaggttgcccgtgatggtgacctgttagaccagatagggaaagatatacat
tttgatcttgtcgaccatgacaaagttcgtagctttcgtatacagaagcaaacccctttt
aatgttttcaaggaggaggtggctaaagaatttggtgtgcctgttcaatttcaacgattc
tggatttgggcaaagaggcagaaccacacttaccgtcccaaccggcctttaacgcccctg
gaggaagcacaatcggttggacatttgagagaagtttccactaagactcacaatgctgaa
ctgaaattgttcttagagatagagataggaccggatttgctacctcttccactacccgac
aaaagcaaagaagatatacttcttttcttcaagctttatgatccagagaaggaagaacta
cggtttgttggtagattttttgttaagagttctggtaaaccagctgaaataatttcaaaa
ttaaatgaaagagccgactttagtcctgatgaagaaattgaactatatgaggaaataaaa
tttgagccacatgtcatgtgtgagcgtcttgataagcgaagttcattcagatctagccag
attgaagatggagacataatctgctttcagaaactccctcaggccaaggacgaggagaag
taccgttaccccgatgtcccttcatatctagaatatgtgaaaaatcgtcagatagttaat
tttcgatctctggagagacctaaagaggatgatttctatctggaattgtcaaagttgcat
acatatgatgatgtggtggagcgagttgctcagaaacttaatctggatgatccttcgaaa
atcagacttacttctcacaactgctattctcaacagcccaaaccacaccacattaaatat
cgggttgcagaacatctgctagacatgttagctcattacaatcaggtttctgatattctg
tattacgaagtattagacatccctcttccggagttgcaatgtctgaaaactttgaaggtt
gcttttcaccatgctaccaaagaagagcctacagttcacaatattaggatgcctaagcag
agcactgttggagatgttcttgaagaaataaagaaaagggttgatctatctcatccaaat
gctgaacttagactgcttgaagtattctatcacaaaatttacaagatctttccactgacc
gagaaaatcgagaatattaatgatcaatactggacattacgcgctgaggaaattccagaa
gaagagaagaacctgggaccccaagaccgtctaattcatgtttatcatttcaccaaagag
gctgcacagaaccaaatgcaagtgcaaaactttggggagcctttctttttgataattcat
gaaaacgaaactttggctgatgttaaactccgtattaaaagaaaattggaagttcccgag
gaggatttttctaagtggaagtttgccttcttatctttgggacgtccggagtatctacaa
gatacagatgttgtatctagtcgttttcagagaagagatgtttacggtgcttgggagcag
tacctagggttggaacattcagacaccacccctaaaaggccctttacaacaaatcagaac
cggcatacatttgagaaaccagtcaaaatatacaactaa
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