Erigeron canadensis (horseweed): 122602965
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Entry
122602965 CDS
T07610
Name
(RefSeq) ABC transporter B family member 1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122602965
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122602965
04147 Exosome [BR:
ecad04147
]
122602965
04090 CD molecules [BR:
ecad04090
]
122602965
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122602965
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122602965
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122602965
CD molecules [BR:
ecad04090
]
Proteins
122602965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
ABC_ATPase
AAA_22
Zeta_toxin
AAA_29
AAA_5
RsgA_GTPase
nSTAND1
AAA_15
AAA_30
APS_kinase
AAA_25
DUF815
DUF87
Rad17
Motif
Other DBs
NCBI-GeneID:
122602965
NCBI-ProteinID:
XP_043631516
LinkDB
All DBs
Position
6:complement(37519683..37526632)
Genome browser
AA seq
1344 aa
AA seq
DB search
MPSQEESSQDEIIKKGSNKEEQWRWSEMQGLELVSENPLPNSNQNQNLHTLTEENQGLEM
ENEGKNSDKKDIQKKKKEKAQTVGFGELFRFADGLDYVLMGVGTIGAFVHGCSLPIFLRF
FADLVNSFGSNANNIDKMSQEVLKYAFYFLVVGAAIWASSWAEISCWMWTGERQSTKMRI
KYLEAALSQDIQFFDTEVRTSDVVFAINTDAVMVQDAISEKLGNFIHYMATFVSGFVVGF
TAVWQLALVTLAVVPLIAVIGGIHATTLSKLSSKSQEALSQAGNIAEQTIVQIRTVLAYV
GETRALQAYSAALKISQRLGYKSGFSKGFGLGATYFTVFCCYALLLWYGGYLVRHNHTNG
GLAIATMFSVMIGGLALGQSAPSMSAFAKARVAAAKIFRIIDHKPSVDKNAESGLELDSV
AGLIELKDVNFSYPSRPDVKILDNFSLSVPAGKTIALVGSSGSGKSTVVSLIERFYDPTS
GQVMLDGHDIKGLKLKWLRQQIGLVSQEPALFATTIQENILLGRPDASIIEIEEAARVSN
AHSFIIKLPDAYDTQVGERGLQLSGGQKQRIAIARAMLKNPAILLLDEATSALDSESEKL
VQEALDRFMIGRTTLVIAHRLSTIRKADLVVVLQQGSVLEMGTHDELFAKGENGAYAKLI
KMQEIAHETALHNARKSSARPSSARNSVSSPIITRNSSYSRSPYSRRLSDFSTSDFSLSV
EGGYPSYRHEKLQFKQQASSFWRLAKMNSPEWTYALIGSVGSVICGSLSAFFAYVLSAVL
SVYYNPDHDYMIREIGKYCYLLIGVSSAALIFNTLQHFFWDIVGENLTKRVREKMLAAVL
KNEMAWFDQEENESSRVAARLSLDANNVRSAIGDRISVIMQNSALMLVACTAGFVLQWRL
ALVLVAVFPLVVAATVLQKMFMQGFSGDLEGAHSKATQLAGEAVANMRTVAAFNSEAKIV
NLFTLSLEKPLRRCFWKGQIAGSGFGIAQFLLYASYALGLWYASWLVKHGISDFSKTIRV
FMVLMVSANGAAETLTLAPDFIKGGRAMKSVFDLLDRKTEIEPDEVDSVPVPDRLRGEVE
LKHVDFSYPSRPDVPVFRDLCLRARAGKTLALVGPSGCGKSSVVSLIQRFYEPSSGRVMI
DGKDIRKYNLKALRRHIAVVPQEPCLFATTIYENIAYGHESATETDIIEAATLANAHKFI
SALPDGYKTSVGERGVQLSGGQKQRVAIARAFLRKAEVMLLDEATSALDVESEKCIQEAL
ERVCSGKTTIVVAHRLSTIRNAHVIAVIDDGKVAEQGSHSHLLKNYPDGCYAKMIQLQRF
SHGEAASMVSGGSGSTSKRQIDGQ
NT seq
4035 nt
NT seq
+upstream
nt +downstream
nt
atgccatcacaagaagaatcatcccaagatgagataataaagaaaggcagcaacaaagaa
gaacagtggagatggtcagaaatgcaaggtcttgaacttgtttcagaaaacccacttcca
aactccaatcaaaatcaaaacttgcacacactaactgaagaaaaccaaggactggaaatg
gaaaatgaagggaaaaacagtgataaaaaagatatacagaaaaagaagaaagagaaagct
caaacagttggttttggagagctgtttagatttgcagatggattagattatgtattaatg
ggtgttggaacaattggtgcttttgttcatggttgttctttgcctatttttttaagattc
tttgctgatcttgtcaattcatttgggtccaatgctaataacattgataaaatgagccaa
gaagtcttaaagtatgcattctactttcttgtagttggagctgcaatatgggcatcttct
tgggcagagatatcgtgttggatgtggacaggagagagacaatcaacaaaaatgaggatc
aaatacttagaagcagcactgagtcaagacattcagttctttgatactgaagtcagaact
tcagatgttgtttttgctattaatactgatgctgttatggttcaagatgccattagtgaa
aagcttgggaatttcatacactatatggcaacatttgtttctggatttgttgtgggattc
acagcagtttggcagttagcactggtaactttagctgtggtgccactaattgcagtaatt
ggaggtattcatgccaccacattatctaaactttcatccaagagtcaagaagctctttca
caagctggaaacattgctgaacagaccattgtacaaattcggacagttttggcatatgtg
ggtgaaacaagagcattacaagcttattctgctgcattaaagatctcacaaagacttgga
tacaaaagtggattttctaaaggatttggattaggagctacatatttcactgtcttttgc
tgttatgcacttcttttatggtatggtggctatcttgttagacacaatcacaccaatgga
ggacttgccattgccactatgttctctgtcatgattggtggacttgctttaggccaatct
gccccaagtatgtctgcatttgcaaaagctcgagtagctgcagcaaaaatctttcgaata
atcgaccacaaaccaagcgttgacaaaaacgctgaatctggtttagagttagactcggtc
gcggggctcattgagctaaaagatgtcaacttttcatacccttcaagaccagatgttaaa
attcttgataactttagtttaagtgttcctgctgggaaaaccattgctttggttggaagc
agtgggtctggaaaaagcacagtggtttccctcattgaaaggttttatgatcccacttca
ggacaagtaatgcttgatgggcatgacatcaagggacttaaactcaaatggttaaggcaa
caaattggtttggttagtcaagagccagcactttttgctacaacaattcaagagaatata
ctattgggtcgacctgatgcatccattatcgagatcgaggaagcagctcgtgtttccaat
gctcattcgttcattattaagttacccgacgcgtatgatactcaggttggggagaggggg
ttacaattatcgggcggacaaaagcagagaatagcgattgcgagggcaatgctaaagaat
cccgcaatcttgcttttggatgaagcaacgagtgctttggattctgaatccgaaaagttg
gttcaagaggcgttggatcgattcatgattgggaggacaactctcgtgattgcccaccgt
ctctccaccataagaaaggcggacctggtagtggttttgcagcagggtagtgttttggaa
atgggaactcatgatgagctttttgcaaagggcgaaaatggtgcctatgctaagcttata
aaaatgcaagagatagctcatgaaactgccttgcataatgccagaaagagtagtgccaga
ccatctagtgcaaggaattcagtgagttcgcctataattacccggaactcgtcttatagt
agatcaccatattcccgaagattgtcagatttttcgacatcagactttagtctatcagtt
gaaggtggttacccgagttaccgtcatgaaaaacttcagtttaagcagcaagcaagttcc
ttttggcggctagcaaagatgaactcacccgaatggacatacgctttgattggctcagtg
gggtctgtgatttgtgggtcactcagtgctttttttgcttatgtcctaagtgctgtcctg
agtgtgtactacaatccagaccatgattacatgattagagaaatcgggaaatactgttat
ctgttgattggggtttcatctgctgcactcatcttcaacactttgcagcattttttctgg
gatattgttggagaaaatttgactaaacgggtgcgagagaaaatgctggctgcagtttta
aagaatgaaatggcatggtttgatcaggaggagaatgagagctcgagggttgccgccagg
ttgtctctcgatgctaataacgtccgttcagcaattggtgaccgtatttcagtgatcatg
cagaactctgccctcatgttggtggcctgcacagctggttttgttcttcagtggcggctc
gcacttgttctggttgctgttttccctctggtggttgcagccactgtcttgcagaaaatg
ttcatgcaaggattttctggtgacttagaaggtgctcactcgaaagcaacacagttagct
ggagaggcggtggccaatatgagaacagtagctgctttcaactccgaggcgaaaattgtc
aaccttttcacactaagtctcgagaagcctcttcgaagatgcttctggaagggccagata
gctgggagtggatttggaatagctcagtttttgctatatgcttcttatgcacttggactt
tggtatgcgtcttggcttgttaagcatggtatctctgatttttcaaagacgatacgggtt
ttcatggttctcatggtctcagcaaatggtgcagctgaaaccctaactcttgctcctgat
ttcattaagggtggccgagcaatgaagtctgtttttgatctacttgaccggaaaactgag
atcgagcccgatgaggtagactctgtccctgttccggaccgtctccgaggcgaagtagag
ctcaagcacgttgatttttcttacccgtctcgccctgacgtaccagttttccgtgacctc
tgtttacgagcccgtgctggaaaaacacttgccctagttggtcctagcggttgcgggaag
agctcagtggtctcactgattcaaagattctacgaaccatcttcgggacgcgtgatgatc
gatggaaaagatatcaggaaatacaacctaaaggcgttaaggcgtcacattgcagtcgtt
ccacaggagccatgtctatttgccaccactatctatgagaacattgcttacggacacgag
tcagcaaccgaaactgacataatcgaagcagccaccctcgccaacgctcacaagtttatc
tctgcattacctgatggttacaaaacatctgttggggaaagaggagtgcagctttcaggg
ggacaaaagcagcgagtcgccatagcaagagcgtttttaagaaaagctgaggtgatgtta
ctagatgaagctacaagcgcacttgatgtagagtctgagaagtgcattcaagaggctctc
gaacgagtctgctcagggaaaacgaccattgttgtagctcataggctatcgactataaga
aatgctcatgttattgcggtgatagatgatgggaaagtggcagaacaagggtcacactcg
cacctgttgaagaactacccagatgggtgttatgccaaaatgatacagttgcaaagattc
tctcacggggaggctgcgagtatggtatcagggggttcaggttcgacttcaaaacgtcag
atagatgggcaatga
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integrated database retrieval system
