Erigeron canadensis (horseweed): 122603354
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Entry
122603354 CDS
T07610
Name
(RefSeq) alpha-amylase 3, chloroplastic-like
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad00500
Starch and sucrose metabolism
ecad01100
Metabolic pathways
ecad01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
122603354
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
122603354
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amyl_C2
AMT4_dom_C
Motif
Other DBs
NCBI-GeneID:
122603354
NCBI-ProteinID:
XP_043631964
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Position
6:32518870..32524584
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AA seq
667 aa
AA seq
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MATVSLADVAFRNLPRHPFVLPGIGVSDLYVRPKKYSLTCRKHPDSKRKLLQKSDVSSNF
RAAVCCSLGESGEASSIDIVRDEVNEDELMAARNALYEAQSRQEALQKERDQLLKELTKQ
NEVLSLITHEKKMAITELEVGVDKDAIAVNGGRLALLIDDDSQKVKLLNDGPRREIPDWM
ARRIGSVRVKFPPRKINVSEANTSTFKSLELPKPAEVWSIAEAKPKDGDIVIDKEVIEKK
RKALERALQRKTVQWQKTPEEIRLEPGTGTGHEIVFQGFNWESCRKKWYMDLAPKAADLS
RCGITAVWLPPPTESVAPQGYMPSDLYNLNSAYGTQEELKHCIQEMHNQHLLALGDVVLN
HRCAHKQSENGVWNIFGGKLAWGPEAIVSDDPNFQGRGNTSSGDIFHAAPNIDHSQDFVR
EDVKQWLNWLRNNIGYDGWRLDFVRGFSGEYVKEYIEASNPAFAIGEYWDSLAYEGGNLC
YNQDAHRQRVINWINATGGTSSAFDVTTKGILHSALHNEYWRLIDPSGKPTGVMGWWPSR
AVTFLENHDTGSTQGHWPFPRDKLMQGYAYILTHPGTPVVFYDHFYDFGLHDVITELIEA
RKRAGIHCRSPVKIYHANNDGYVAQIGDTLVMKLGHFDWNPSKEIDLDGNWHKFVDKGSD
YRLWLRM
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggctacagtgtcacttgcagatgttgccttcaggaatcttccacgccacccatttgtt
ttgccaggcattggtgtatctgatttgtatgtccgccccaagaaatattccctgacctgt
agaaaacaccccgatagtaaaagaaagttattacagaaaagtgacgtctcttcaaacttt
agggctgcagtgtgctgtagtctgggagagtctggtgaggcttcttcgatagatattgtc
cgtgatgaagtcaatgaagatgagttgatggcagctagaaatgcactttatgaggcacaa
tccagacaagaagccttacaaaaggagagagatcagttacttaaggagttgactaaacaa
aacgaagttttgtcactaataacacatgagaagaaaatggctataacagaactcgaggta
ggagtagataaagatgcaatagctgtcaatggtggacggttagcccttttaattgatgat
gattctcagaaagtaaaattgcttaatgatggccctcgtagagagataccagactggatg
gcacgaagaataggttctgttcgtgttaagtttcctcccagaaagattaatgtttctgaa
gcaaatacatccacatttaaatctctggaattgcctaagcctgctgaagtatggtcaatt
gccgaagcaaagccaaaggatggggacattgtaattgataaagaggttatcgaaaagaaa
cggaaggctttagaacgtgctttgcagcgtaaaactgttcaatggcagaagaccccagaa
gaaataagattagagccaggaactggcacaggacacgagattgtgtttcaaggttttaat
tgggaaagctgtagaaaaaagtggtacatggatctggctccaaaagctgctgatttgtct
cgctgtggaataacagcagtgtggttacctccaccaacagaatctgttgctccacaaggg
tatatgccttctgatctctacaacttaaactccgcatatggaacccaggaggagctgaag
cattgcatacaggagatgcataaccaacatcttttggccttgggagatgttgtgctcaat
catcgctgtgctcataaacagagtgagaatggggtatggaacatttttggtggcaagctt
gcctggggacctgaagcaattgtcagtgatgatccaaattttcaaggtcgtggaaatact
tcaagtggcgacatctttcatgcagcaccgaacattgatcattcacaggactttgtaaga
gaggatgtaaaacagtggctgaactggctccgaaacaatattggttatgatgggtggcgc
cttgactttgtgaggggcttctcgggtgaatacgtgaaagaatacattgaggcatcaaat
cccgcatttgcaattggagaatattgggatagtctggcttatgaaggtggtaatctttgc
tataatcaagatgcacatcgtcagcgcgtgattaattggatcaatgccactggtggtacc
tcatctgcatttgatgtcacaacaaagggtatccttcattctgcattgcataacgagtat
tggagattgatagatcctagcggaaaaccaacaggagtgatgggatggtggccctcgcgt
gctgtgacattcttggagaaccatgacactggatcaacacagggtcattggccattccct
agagataagcttatgcaaggatatgcatacatcttaacccatcctgggacgcctgtggta
ttttatgaccatttctatgattttgggctccatgatgtcataacggaactaatagaagcc
cgaaagcgagctggaatccactgccgaagtcctgtgaagatttaccacgctaataatgac
ggatatgtggcccagataggagatacgttagtaatgaagcttgggcattttgattggaac
ccttcaaaagaaattgacctggatgggaattggcacaagtttgtggataaaggctcagat
taccggctgtggctgagaatgtaa
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