Erigeron canadensis (horseweed): 122603762
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Entry
122603762 CDS
T07610
Name
(RefSeq) ABC transporter B family member 19-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122603762
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122603762
04147 Exosome [BR:
ecad04147
]
122603762
04090 CD molecules [BR:
ecad04090
]
122603762
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122603762
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122603762
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122603762
CD molecules [BR:
ecad04090
]
Proteins
122603762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
ABC_ATPase
AAA_16
Zeta_toxin
AAA_21
AAA_22
AAA_15
AAA_30
nSTAND1
RsgA_GTPase
DUF87
AAA_23
AAA_19
Glyco_transf_22
DUF4755
RuvX
Motif
Other DBs
NCBI-GeneID:
122603762
NCBI-ProteinID:
XP_043632493
LinkDB
All DBs
Position
6:32974956..32982720
Genome browser
AA seq
1250 aa
AA seq
DB search
MSETTKQAMPAAAEKKKEQSLPFYQLFSFADKYDYILMIFGSIGAIIHGSSMPFFFLLFG
QMVNGFGKNQSDLITMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSTLRKKY
LEAVLKQDVGFYDTDARTGDIVFGISTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVS
AWKLALLSIAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEEAIAQVRTVYSYVGE
TKALNSYSDAIQHTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGK
AFTAIFSAIVGGMSLGQSFSNLGAFSKGKSAGYKLLEIINQKPTITTNSVDGKCLTEVNG
NIEFKEVTFSYPSRPDVIIFRDFSIVFAAGKTVAVVGGSGSGKSTVISLIERFYDPNQGQ
ILLDNVDIKTLQLRWLRDQIGLVNQEPALFATTILENILYGKPDATMADVEAATSAANAH
SFITLLPNGYNTQVGERGVQLSGGQKQRIAIARAMLKDPKILLLDEATSALDSGSESIVQ
EALDRLMIGRTTVVVAHRLSTIRNVDSIAVIQQGQVIETGTHEDLISKPGAYASLIRFQE
MAGNRDFSNPSTHRTRSTRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETD
KKNPAPSGYFLRLLKMNAPEWPYSIMGSVGSILSGFIGPTFAIVMSNMIEVFYYTNPARM
ESKTKECVFIYVGAGLYAVVAYLIQHYFFSIMGENLTTRVRRMMLAAIMRNEVGWFDEEE
HNSSLVAARLATDAADVKSAIAERIAVILQNMTSLLTSFVVAFIVEWRVSLLILGTFPLL
VLAYFAQQLSLKGFAGDTAKAHAKTSMIAGEGVSNIRTIAAFNAQDKILSLFSDELRVPQ
NQSLRRSQYSGMLFGISQLALFASEALILWYGAHLVKDGVSTFSKVIKVFVVLVITANSV
AETVSLAPEIIRGGEAIGSVFAVLDRSTRIDPDDPDAEMVETIRGEIELRHVDFSYPSRP
DVIIFKDLSLRIRAGQSQALVGASGSGKSSIIALIERFYDPTAGKVMVDGKDIRRLNLRS
LRAKIGLVQQEPALFAASIMENIAYAKEEATEAEVIEAARAANVHTFVSGLPQGYNTPVG
ERGVQLSGGQKQRIAIARAVLKNPTILLLDEATSALDAESECVLQEALERLMRGRTTVLV
AHRLSTIRGVDSIGVVQDGRIVEQGSHSELLGRGTDGAYSRLLQLQQHRI
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaacaacaaagcaggcaatgccagcagcagctgaaaagaaaaaagaacaaagt
ctacctttctaccaattgttttcatttgcagataaatacgattacattctcatgatcttt
ggtagcattggtgccattattcatggatcttccatgccttttttcttccttttgttcggt
caaatggtcaacggtttcggtaaaaaccagtctgatttaatcaccatgactcatgaagtc
tccaagtatgctctgtatttcgtatatctggggctagtagtgtgtgtatcatcatatgca
gaaattgggtgttggatgtatactggtgaaagacaagtgagcacattgagaaaaaagtat
ttagaagcagttttgaaacaagatgttgggttttacgacactgatgcaagaacaggagat
attgtttttggtatttcaaccgatactcttcttgttcaagacgccattagtgaaaaggtg
gggaactttatacattatctttcaacatttttggctggattggttgttggatttgtatca
gcttggaagttagctcttttaagcattgcagttattccgggtattgcatttgctggtggg
ttgtacgcgtatactctaacgggtctcacgtccaagagccgcgaatcctatgccaatgct
ggcattattgccgaagaggctattgcacaagttaggactgtgtactcgtatgttggcgag
actaaggcccttaactcgtattcagatgctatccaacataccctcaagctcggttacaag
gccggaatggctaagggtttggggctgggatgtacttatggaattgcttgcatgtcttgg
gcacttgttttctggtatgcgggtgtatttattaggaatgggcagactgatggtggaaag
gcatttaccgccattttctctgccattgttggtggcatgagtttaggtcaatcattttca
aatcttggagcttttagcaaaggcaaatcagctggatacaagttgctagaaattatcaac
caaaaacctactataacaaccaactctgtagatggcaagtgcctaaccgaggtcaatgga
aatattgagtttaaggaagtaactttcagttacccatcaaggccagatgtcattatcttc
agagatttctccattgtctttgcggctggaaagacagttgcggtggttggtggcagtgga
tcagggaaaagcactgttatttcgttaatcgagaggttttatgatccaaatcaagggcaa
atactcctagacaatgtggacatcaagacattgcaacttcgatggttgcgtgatcaaatt
ggtcttgtgaaccaagaacctgcactttttgccaccactatccttgaaaacatactttat
ggaaaacctgatgcaactatggccgatgtggaagctgctacctctgcagccaatgctcat
agcttcattaccctgcttcctaatggctataacactcaggtgggggaaagaggagttcag
ctatctggtggtcagaaacaaaggattgcaattgctagagcgatgttaaaggacccaaag
atcctacttcttgatgaggcaaccagtgctcttgactcgggttctgagagcatcgtgcaa
gaagctcttgatcgtctaatgattggcaggacaactgttgtggttgcacatcggctatcc
accataagaaacgttgactcgatagcagtcattcaacaaggacaagttattgagactggg
acccatgaagatctaatttcaaaacctggtgcctatgcttccttaatcaggtttcaagaa
atggcaggaaaccgagatttctccaatccttcaacccaccgcacaaggtcaacaagactg
agtcactcattgtcaactaagtctcttagtctaaggtctggaagcttaagaaacttaagc
tatcagtacagcacaggcgcagatggtcgtatagaaatgatctcaaatgctgaaactgat
aagaaaaacccggcaccaagtgggtactttctccgtcttttgaaaatgaatgctccggaa
tggccttattcaatcatgggatccgtaggatcaattctttctggatttatcggtccaaca
ttcgccattgtaatgagcaatatgattgaggtcttttactacactaatcctgctagaatg
gagagtaagaccaaagagtgtgttttcatctatgttggagctggtctgtatgctgtagta
gcatatttgatacaacattacttctttagtattatgggtgaaaatctcacaacaagagta
agaagaatgatgcttgcagccataatgaggaacgaagttggttggtttgacgaagaagaa
cataactcaagcctagttgcagcccggctagccacagatgctgcagacgtgaagtctgca
atagccgagaggatcgcagtcatactacaaaacatgacatctctactcacttcatttgta
gttgcattcatagtggaatggagggtgtcccttctcattctcggcacgttccctcttctt
gtccttgcatatttcgctcagcaactttcactcaaaggatttgctggggacacagccaag
gcacacgcgaaaacaagtatgattgctggagaaggagttagcaacattcgaaccattgca
gccttcaatgcccaagacaagattctctccttgttctcagacgaactccgtgtgccccag
aatcaaagtcttcgcaggagtcagtattcgggcatgttatttggaatttcccaactcgct
ctctttgcatccgaagctctaatcctttggtacggtgcccatctcgttaaagacggcgta
tccaccttctctaaagtcatcaaagtgtttgtggtcctagttataactgcaaactcagta
gctgagacggttagtcttgcacccgagattatcagaggtggtgaagccattggctctgtg
tttgctgttcttgataggtcaactcgtatcgacccagacgatcccgatgctgagatggtt
gaaactattcgaggcgagatcgagctacgtcatgtggacttttcatacccttcaagacct
gatgtaatcatattcaaggatcttagtcttagaatccgagcgggccagagccaagccctt
gtgggagctagtggttctggaaaaagttccataattgcattaatcgagcgtttttatgac
ccgactgcaggaaaagtcatggttgatggaaaagacatcagaaggttaaacttaaggtcc
cttcgggccaaaatcgggttggtccaacaagaacctgccctattcgcagctagcataatg
gaaaacatcgcttacgcgaaagaagaagctacagaagccgaagtcatcgaagcagcacgt
gcagcaaatgttcatacattcgtaagcgggttacctcaagggtacaacacaccagtaggc
gaaagaggtgttcaactctcgggaggccagaaacaaagaatagcaatagctcgggccgtt
ctgaaaaacccaacgatactcctactagatgaggcaactagtgctctagatgctgaatca
gaatgcgtgcttcaagaagcacttgaaagactaatgagaggccgaaccacggttctagtg
gctcatcgattatcaaccatacgaggtgttgatagtatcggtgtggtccaagatgggcgc
atcgtggaacaaggaagccatagcgaattgttaggccgaggaaccgatggagcttactca
aggctgttgcagcttcaacaacatcgcatatga
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integrated database retrieval system
