Erigeron canadensis (horseweed): 122605521
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Entry
122605521 CDS
T07610
Name
(RefSeq) uncharacterized protein LOC122605521
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122605521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecad03400
]
122605521
Enzymes [BR:
ecad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
122605521
DNA repair and recombination proteins [BR:
ecad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122605521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
122605521
NCBI-ProteinID:
XP_043634412
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Position
6:complement(22725490..22728384)
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AA seq
411 aa
AA seq
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MWSSKSKLAKPTEVNANPIATPTEAMISDINGRPVLQPATSNRVLAKYPLKKSISRPKPA
SIAPTPPPPSQTSNTPNAKANNNSPVSPKLKSPRVPAIKRGGNNRSDNTNSSTDRPLLTP
PTKCITTKTAIPLKKSKTSIESKSTNPNSLVVKYSSEAIVDAPGSIAAARREQVAVMQVQ
RKMKIAHYGRAKSAKYDSCQKLITTLFDPNILVNTNNNNIVTEEKRCSFITPYSDPIYVA
YHDEEWGVPVHDDRLLFEMLVLTGAQVGSNWTSVLKKRQLFREAFSDFEVEVVSKFTDIK
ITTISSSYGIEVGLIRGVINNATCILEIKKAFGSFDKYIWGFVNHKPIATNYKPNHKLPV
KTSKSEAISKDMMRRGFRQVGPTIIHSFMQAVGLTNDHVTTCPRHRYLTLT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcctcaaaatccaaattggcaaaaccaactgaagtaaatgctaatcctattgct
actccgactgaagccatgatctcagacatcaatggacggcctgttcttcaaccagccact
tccaaccgcgttctagcaaaatatcctcttaaaaagagtatctcacgtcccaaaccggct
tccatagctccaacaccaccaccaccatctcagactagtaacactccaaatgccaaagcg
aataataattcccctgtctcgcctaagctgaaatcaccccgagtgcctgccattaaacgt
ggtggaaacaaccgatcagataatactaattcaagcacagacagacctcttttgacacca
ccaaccaaatgcataactacaaaaactgcaattcctctaaagaagtcaaagacaagtatt
gaaagcaaaagtactaatcctaattcgttggtggtaaagtactcatccgaggcgattgta
gatgctcctgggagtatagcagccgctagacgagaacaagttgcagtgatgcaagttcaa
aggaaaatgaagatagcacattatggtagagcaaagtctgccaagtatgacagttgtcaa
aaactgatcacaactttgtttgatcccaatattcttgttaatacaaataacaataatatt
gtcacagaagagaaaagatgcagtttcattactccttattcagaccctatatatgttgca
taccatgatgaagaatggggagttcctgttcatgatgataggttgctgtttgaaatgctg
gtgttgacaggtgctcaagttggatcaaattggacttcagtcttaaagaaaaggcaacta
tttagggaagcattctcagactttgaagtagaagttgtgtcgaaatttacagatataaag
ataacaacaataagtagctcttatgggattgaagttggacttattagaggtgttatcaac
aatgctacttgtattcttgagatcaagaaagcattcgggtcattcgacaaatacatatgg
ggatttgtaaatcacaagcccattgcaacaaactacaaaccaaatcacaagctgccagta
aagacctctaaatcagaagccataagcaaagacatgatgagaagaggatttcggcaggtc
gggcctactatcattcattcctttatgcaagctgtcgggctcaccaatgatcacgtcacc
acttgtccgcgccatcgttatctgactctcacctaa
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