Erigeron canadensis (horseweed): 122606781
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Entry
122606781 CDS
T07610
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ecad
Erigeron canadensis (horseweed)
Pathway
ecad02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ecad00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122606781
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ecad02000
]
122606781
04147 Exosome [BR:
ecad04147
]
122606781
04090 CD molecules [BR:
ecad04090
]
122606781
Enzymes [BR:
ecad01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122606781
Transporters [BR:
ecad02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122606781
Exosome [BR:
ecad04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122606781
CD molecules [BR:
ecad04090
]
Proteins
122606781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
AAA_21
RsgA_GTPase
Zeta_toxin
AAA_15
AAA_16
AAA_5
AAA_30
DUF815
DUF87
SbcC_Walker_B
AAA_7
nSTAND1
Motif
Other DBs
NCBI-GeneID:
122606781
NCBI-ProteinID:
XP_043635572
LinkDB
All DBs
Position
7:37178693..37184967
Genome browser
AA seq
1249 aa
AA seq
DB search
MNTGDKERAEASTFVGGPQDTRLLAKEKEKTETVPFYKLFAFADSTDYILMIVGTLGAIA
NGVCTPLMTILFGELVESFGENNDEVVDAVTKVVLKFIYLGIGCGIAAFLQVTMWMITGE
RQAARIRNLYLKTILRQDLSFFDRETNTGEVIGRMSGDTILIQDAIGEKVGKFTQLASTF
MGGLVIAFIKGWLLTLVMLSAIPPMVLSGAFMSITIAKMASRGQTAYGKAAVVVEESIGS
IRTVASFTGEKKAVADYNKFLVNAYNSSVHEGLATGLGLGTMMLIIFCSYALAAWYGAKL
IIEKGYSGATVITVMFSVLIGSMSLGQASPCLSAFASGQAAAFKMFETINRKPEIDTYDT
NGKVLSDIRGDIELQDVYFTYPARPDEEIFSGFSLSISSGTTAALVGQSGSGKSTVISLI
ERFYDPQAGEVLIDDINIKEFQLKWIREKIGLVSQEPVLFTSSIKDNIMYGKNGASNDEI
RVAVELANAAKFIDNLPQGLDTMVGEHGTQLSGGQKQRIAIARAILKDPRILLLDEATSA
LDAESERVVQEALDRIMVNRTTVIVAHRLSTIKNADMIAVIHRGRMVEKGSHSELLRDPE
GAYSQLIKLQEIDCELGRHGSDNQDMELSPRHSMNVSINGVPAQISVPSGESLGTELDQA
SEKPPKVPLRRLAYLNKPEVLVIILGAIAGIINGTIYPIFGLLLAGMIKTFFEPPKEMKS
DSRFWALMFIVLGVVSFFAYPGRSYLFAVAGSKLIRRIRSLCFEKVINMEVGWFDKPENS
SGAIGARLSTDAANVRGLVGDSLAQLVQHSTSAITGLVIAFTACWQLALIILGLIPLMGV
NGYVQMQFLKGFSADAKKMYEEASQVANDAVGSIRTVASFCAEEKVMELYRIKCEGPKKT
GIKQGFISGIGFGMSFFFQFCMYGTSFYAGARFVEAGKTTFRDVLRVFFALIMATLGISQ
SSTFAPDISKAKSSAVSVFTILDRKSEIDPSDESGVILDTVKGEIELNHISFKYPTRPDV
EIFRDLCLTIHSGKTVALVGESGSGKSTVIQLLQRFYNPDSGSITLDGVELQKFQLKWLR
MQMGLVSQEPVLFNHTIGANIAYGKDGDATEAEIVAASELANAHKFISGLHQGYNTMVGE
RGVQMSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDRVMVNRTTVVVA
HRLSTIKNADVIAVVKNGVIVEKGKHEKLINIQDGFYASLVSLHMSSDH
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgggtgataaagaaagggctgaggcatccacttttgttggtggtccacaagac
acccgtttgctggccaaagaaaaggagaaaacagaaacagtcccgttttataagctattt
gcttttgcggattccactgattacatattgatgattgttggtacgcttggcgccatagct
aatggagtatgtacgccactcatgactattctcttcggcgaacttgttgaatcttttggc
gagaataatgatgaagtggttgatgctgttaccaaggtagtgctgaaattcatttacctt
ggtattgggtgtggcattgcagcatttctccaggtgacaatgtggatgataacgggagaa
agacaggctgcaagaattagaaatctgtatctgaaaaccattttgagacaagatctttcc
ttctttgacagggaaacaaatacaggggaagttattggcagaatgtcaggtgataccatc
ctcatacaagatgcaattggcgagaaggttggaaaattcacacagctagcgtcaacgttt
atgggaggtctcgtgatagcatttattaagggatggcttcttacacttgtcatgttaagt
gcgatccctcctatggtgctatctggtgcatttatgtcaataactatagctaagatggca
tcacggggccaaactgcttatggtaaagcagcggttgtagtcgaagaatcaattggctca
atcaggacggttgcttctttcaccggggagaaaaaggctgtggctgattacaataaattc
cttgtaaacgcttacaattctagcgttcatgaaggcctggctactggccttggtctcggg
acaatgatgctcatcatattctgtagttatgccctggctgcttggtatggtgcaaagttg
ataattgaaaaggggtactctggtgcaactgtgattactgtaatgttctctgtgctgatt
ggatccatgtctctggggcaggcgtctccatgtttgagtgcatttgcttcaggccaggca
gcagcttttaaaatgtttgaaactataaacagaaagcctgaaatagacacatatgacaca
aacggtaaagtattaagtgatattcgtggtgatatcgaattacaagatgtgtatttcaca
tatccggcaagaccagatgaggaaatattcagtggattctcccttagtatctcaagtggc
acaactgcagctttggtcggtcaaagtggaagcgggaaatcaactgtgatcagcttaata
gagagattttatgatcctcaagcaggggaagttcttattgatgatattaatatcaaagaa
ttccagcttaagtggattagagagaaaattggtcttgttagccaagaacctgttctgttc
acatcaagcattaaggacaatattatgtacgggaaaaatggtgcatctaatgatgagatt
agagttgcagttgagctcgcaaatgctgccaaatttatagacaacctccctcagggactg
gacacgatggttggtgagcatggaacacaactttctggcggacagaagcaaagaatagcc
atagccagagcgattctgaaagatcctcgaatccttcttttagatgaagcaactagtgca
cttgatgcagaatccgagagagttgtgcaggaagcattggacaggataatggtaaataga
acaactgtcattgttgcacatcgtctaagtacgataaaaaatgccgacatgattgcagtt
attcatcgtggaaggatggttgagaaaggatcacattccgagctactccgggatccagaa
ggagcatattctcaacttataaaattgcaagagattgattgtgaattaggacgacatggc
tcagacaaccaagatatggaactcagtccccgccactcaatgaatgtctctattaatgga
gtgcctgcacaaattagtgtcccttcaggcgagtctctggggactgaactagatcaagct
tcagaaaaacctccaaaagtcccactccgaaggcttgcatatctcaataagccagaggtg
ctggtaatcatattgggtgcaatagctggtattataaatggaacaatctacccaattttt
ggcttactactcgctggcatgatcaagaccttctttgaaccacctaaggaaatgaaaagt
gactcaagattctgggctctaatgttcatagtcctgggagtggtatcatttttcgcttat
ccgggaagatcttacctttttgctgttgctggatctaagctaataagaaggatcagatcg
ttatgctttgaaaaggtgattaacatggaggtaggttggtttgataagccagaaaactca
agtggtgcaattggtgcaaggctgtcaacagatgcagccaatgttcgtggtttagtcgga
gactcactagctcagcttgttcaacattcaacgtcggctattactggtttggtaatagct
tttacagcgtgctggcagttggctcttataattctgggcctcattcccctaatgggtgtt
aatggatatgttcaaatgcaattcttgaaagggttcagtgcagatgctaagaagatgtat
gaggaagcaagtcaggtggcaaatgatgcggttgggagcataagaacagtggcttcattt
tgcgcagaagaaaaagtgatggaactttatagaattaaatgtgagggtcccaagaaaaca
gggattaaacaaggtttcatcagcgggattgggtttggaatgtcctttttctttcaattc
tgtatgtatggaaccagcttttatgctggtgcacggtttgttgaggctggaaagactaca
tttagagatgtattgagggtattttttgctttgataatggcaaccttaggcatatctcag
tcaagcacgtttgccccagatataagcaaagcgaaaagttctgcagtatcagttttcact
attctagatagaaagtcggagattgacccgagtgatgaatcaggtgtgatattagacacg
gttaagggtgaaattgagctcaatcacattagctttaagtatccaactagacctgatgtt
gagatatttcgtgatctatgcttaaccatccatagtggcaagacagtggcgttggttggt
gaaagtggaagtgggaagtcaacagttatccaactcctgcaaagattttacaatccagat
tcaggttctatcacgctggacggtgttgagttacaaaagtttcaactcaagtggctcagg
atgcaaatgggtctggtgagccaagagccagtgctgttcaatcacaccatcggagctaat
attgcttatggaaaagacggtgatgccactgaggctgaaatagttgctgcttccgagttg
gccaatgcccacaagttcattagtgggttacaccagggttacaataccatggtaggggaa
agaggagtgcaaatgtcgggtgggcagaaacaaagagtagcaatagccagagccattgtc
aaaagtccaaagatactattactggatgaagctacaagcgcactggatgccgagtcagaa
agagtggttcaagatgcattggatcgggtcatggttaacaggaccacagtggtggttgct
catcgattgtcaaccatcaagaatgcagatgtaattgcagtggtcaagaatggagtgatt
gttgagaaaggaaagcatgaaaagctaatcaatatccaggacgggttctatgcatcttta
gtttcacttcatatgagctctgaccattag
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integrated database retrieval system
