Equus caballus (horse): 100049894
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Entry
100049894 CDS
T01058
Symbol
MBD5
Name
(RefSeq) methyl-CpG-binding domain protein 5 isoform X1
KO
K23219
methyl-CpG-binding domain protein 5
Organism
ecb
Equus caballus (horse)
Pathway
ecb03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100049894 (MBD5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100049894 (MBD5)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
100049894 (MBD5)
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
100049894 (MBD5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
MBD
Motif
Other DBs
NCBI-GeneID:
100049894
NCBI-ProteinID:
XP_005601535
Ensembl:
ENSECAG00000024839
VGNC:
20008
UniProt:
F6QX54
LinkDB
All DBs
Position
18:30860294..31061578
Genome browser
AA seq
1732 aa
AA seq
DB search
MNGGKECDGGDKDGGLPAVQVPVGWQRRVDQNGVLYVSPSGSLLSCLEQVKTYLLTDGTC
KCGLECPLILPKVFNFDPGAAVKQRTAEDVKADEDVTKLCIHKRKIIAVATLHKSMEAPH
PSLVLTSPGGGTNATPVVPSRAATPRSVRNKSHEGITNSVMPECKNPFKLMIGSSNAMGR
LYVQELPGSQQQELHPVYPRQRLGSSEHGQKSPFRGSHGGMPSPASSGSQIYGDGSISPR
TDPLGSPDVFTRNNPGFHGAPNSSPIHLSRTPLSPPSVMLHGSPVQSSCAMAGRTNIPLS
PTLTTKSPVMKKPMCNFSSNMEIPRAMFHHKPPQGPPPPPPPSCALQKKPLTSEKDPLGI
LDPIPSKPVNQNPVIINPTSFHSNVHSQVPVMNVSMPPAVVPLPSNLPLPTVKPGHMNHG
SHVQRVQHSASTSLSPSPVTSPVHMMGTGIGRIEASPQRSRSSSTSSDHGNFMMPPLGPQ
ATCSGIKVPPRSPRSTIGSPRPSMPSSPSTKSDGHHQYKDIPNPLIAGMSNVLNTPSSAA
FPTASAGSGSVKSQPGLLGMPLNQILNQHNAASFPASSLLSAAAKAQLANQNKLAGNNNS
SSSNSGAVAGSGNTEGHSTLNTMFPPTANMLLPTGEGQSGRAALRDKLMSQQKDSLRKRK
QPPTTVLSLLRQSQMDSSAVPKPGPDLLRKQGQGSFPISSMSQLLQSMSCQSSHLSSNSA
PGCGGSNTALPCSANQLHFTDPNMNSSVLQNSLTQNIPLRGEAVHCHNANTNFVHSNSPV
PNHHLAGLINQIQASGNCGMLSQSGMALGNSLHPNPPQSRISTSSTPVIPNSIVSSYNQT
SSEAGISGPSSSIAIAGTNHPAITKTTSVLQDGVIVTTAAGNPLQSQLPIGSDFPFVGQE
HALHFPSNSTSNNHLPHPLNPSLLSSLPISLPVNQQHLLNQNLLNILQPSAGEGKSEINL
HPLGFLNPNVNAALAFLSGDMDGQVLQPVHFQLLAALLQNQAQAAAMLPLPSFNLTISDL
LQQQNTPLPSLTQMTAPPDHLPSNQSENSRAETLLTSPLGNPLPSFAGSDTTFNPLFLPA
VTGASGLMALNPQLLGGVLNSASANTANHPEVSIATSSQATTTTTTTSSAVAALTVSTLG
GTAVVSMAETLLNISNNAGNTPGPAKLNSNSVVPQLLNPLLGTGLLGDMSSINNTLNNHQ
LTHLQSLLNNNQMFPPNQQQQQLLQGYQNLQAFQGQSAIPCPANNNPMACLFQNFQVRMQ
EDATLLNKRISTQPGLTALPENPNTTLPPFQDTSCELQPRIDPSLGQQVKDGLVMGGQGD
ASVDAIYKAVVDAASKGMQVVITTAVNSTTQISPIPALSAMSAFTASIGDPLSLPSAVSA
VIHGRNMGSVDHDGRLRNARGARLPRNLDHGKNSNEGDGFEYFKAASCHTSKKQWDGEQS
PGGERNRWKCEEFLDHPGHIHSSPCHERSNNVSTLPFLPGEQHPILLPPRNCQGDKILEE
NFRYNNYKRTMMTFKERLENTVERCAHINGNRPRQSRGFGELLSTTRQDLVLEEQSPSSS
NSLESSLVKDYIHYNGDFNAKSINGCVPSPSDAKSISSEDDLRNPDSPSSNELIHYRPRT
FNVGDLVWGQIKGLTSWPGKLVREDDVHNSCQQSPEEGKVEPEKLKTLTEGLEAYSRARK
RNRKSGKLNNHLEAAIHEAMSELDKMSGTVHQIPQGDRQMRPPKPKRRKISR
NT seq
5199 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaggcaaggagtgtgacggaggggacaaggatggaggtcttccagctgtacaa
gttcctgtgggttggcagcgtcgtgtggatcaaaatggagtgctttatgtcagtcccagt
gggtctttgttatcttgcttggagcaggttaaaacatacctgcttactgacggaacatgc
aagtgtggcttggaatgtcctcttattcttcccaaggtgtttaattttgatcctggagct
gctgtgaaacagagaactgcagaagatgttaaagcagatgaagacgtcacaaagctatgc
atacataaaagaaaaatcattgcagtggcaacacttcataaaagcatggaagctccacat
ccttcactggtgctcaccagtcctggaggaggaacaaatgcaactccagtagtaccttca
cgggcagcaactccaagatctgtaagaaataagtctcatgaaggaattacaaattctgta
atgcctgaatgtaagaatcctttcaagttaatgattggatcatcaaatgccatgggaagg
ctatatgtacaagaactgcctggaagccagcaacaagaactccaccctgtctacccccgg
cagagattgggcagcagtgaacatggacagaaatctccattccgtggcagccatggaggc
atgcccagcccagcgtcgtcaggttcccagatatatggagatggctcaatctctccaagg
actgacccacttggaagccctgatgttttcacaagaaataatcctggttttcatggagct
cccaattctagtcctattcacctgagtaggactcctctttctccaccttcagtaatgcta
catggttctcctgtacagtcatcctgtgcaatggctggaaggactaatatacctctttcc
ccaaccttgactaccaagagtccagtaatgaaaaaaccaatgtgtaatttttcaagtaat
atggaaataccacgagcaatgttccaccacaaaccaccccaaggcccacctccccctcct
ccaccttcttgtgctcttcagaaaaagccattaacttctgagaaagatccacttggcatt
cttgaccctattcctagtaaaccagtgaatcagaaccctgttatcattaatccaactagt
ttccattcaaatgtccactctcaggtacctgtgatgaatgtaagcatgcctcctgctgtt
gttcctttgccaagtaatctccctttgccaaccgtaaaacctggtcacatgaatcatggg
agtcatgtacaaagagttcagcattcagcttcaacctccttgtccccttctccagtgaca
tccccagtgcacatgatggggactggaattggaaggattgaggcatcgccccaaagatca
cgctcatcttccacatcatcagatcacggaaatttcatgatgccacctctaggaccccag
gccacttgtagtggtattaaggttccacccaggtcaccaaggtcaacaatagggtcccca
aggccatcaatgccatcaagcccttctaccaagtccgatggacatcatcagtacaaggat
atccctaacccattaattgctggaatgagtaatgtactaaataccccaagcagtgcagct
tttcctactgcatctgccggaagtggttctgtaaagagtcagcctggtttgctgggaatg
cctttaaatcagatcttgaaccagcacaatgctgcctcctttccagcaagtagtttactc
tcagcagcagccaaagcacagctagcaaatcaaaacaaacttgctggtaacaacaatagc
agcagtagcaattctggagctgttgctggcagtggcaacactgaaggacacagcacttta
aacaccatgttccctcctactgccaacatgcttctcccaacaggtgaagggcaaagtggt
cgcgcagcactaagagataagctgatgtctcagcaaaaagactcattgcggaaaagaaaa
cagccacctaccacagtgttgagtttgctcagacagtcgcaaatggatagttctgcagtt
cctaaacctggacccgacttgctaaggaagcagggtcagggttcatttcccatcagttca
atgtctcagttactacagtctatgagttgtcaaagctctcacttgagtagcaatagtgcc
ccgggttgtgggggctcaaatactgctttgccttgctctgctaaccagctgcattttaca
gatcccaatatgaactccagtgttcttcagaattcactgacacagaacatacctttaaga
ggggaagccgtgcactgccacaatgcaaacactaactttgttcacagtaacagtccagtc
ccgaaccaccatcttgcaggtttaataaatcagattcaggctagcgggaactgtgggatg
ctcagtcagtcgggcatggctttaggaaattcattacatcccaatccacctcagtcaaga
atttcaacgtcctccactccagtgataccaaacagcattgttagcagctataatcaaaca
agttctgaagcaggcatttcaggaccatcatcctccatagccatagctggcaccaaccac
cctgccatcacaaagacaacatctgttcttcaagatggcgttatagtcaccaccgcagct
ggaaacccactgcagagtcagctgcccattgggagtgattttccctttgttggccaggag
cacgcacttcattttccatccaacagcacttcaaacaaccatcttccacaccccttgaac
cccagcctcctcagttctctacctatctctttgccagtgaatcaacagcatctcctaaac
cagaatctattaaatatcctccagccttcagcaggagaaggcaagtctgagatcaacctc
caccctttaggttttctcaacccgaatgtaaacgctgctttagcttttctctccggtgac
atggatgggcaggtattgcaacctgttcactttcagctcttagcagccctgcttcagaac
caagcccaagcagctgccatgcttcccctgccatctttcaatctgaccatctcagatctt
ttgcaacagcaaaatacccctttaccctcattaacacagatgacagccccaccagaccat
ttgccaagcaatcagtcagagaacagccgagctgagacccttttaaccagccccctgggg
aaccctttaccaagctttgcaggcagtgacactacttttaaccccctgttcctcccagct
gtcactggggcctcaggattaatggccttgaatccccagctgttgggaggtgtcctgaac
tcggcatcggccaacaccgctaatcatccagaggtttccatagcaacttcctcccaggca
accactaccacaaccactacatcatcagcagtggcagcactgactgtctcaacacttggt
gggacagcagtggtgtcaatggcagaaacattgctgaatatatctaataatgctgggaat
acacctggtccagctaaactcaacagtaactctgtggtgccacagctacttaaccctcta
ctggggacaggtctgcttggtgacatgtcctcaataaacaatactttgaataaccatcaa
ctgactcatctacagtcgctgttaaacaacaatcagatgtttcctccaaatcagcaacag
cagcaacttcttcaggggtaccagaacctccaggcatttcaaggacagtccgcaattcct
tgcccagctaacaataaccccatggcttgtctgtttcagaactttcaggtgaggatgcag
gaagatgcaactctcctaaacaaaagaataagcactcagccggggctcacagcacttcct
gagaatccgaacactacacttccgcctttccaagatacatcttgtgagttgcaaccgagg
attgacccatctcttggtcagcaggtgaaggatggccttgttatgggtggccaaggtgat
gcttctgtagatgccatttacaaggcagttgttgatgcagccagcaaaggaatgcaggtt
gtcatcaccactgcagtcaacagtacaactcagatcagccccattccagctctgagtgcc
atgagtgccttcactgcttcgattggtgacccgttaagtctccccagtgctgtcagtgcg
gtcattcatggacgaaacatgggcagtgtcgatcatgatggtaggctgaggaatgcaaga
ggggcccggctgcccaggaatctggaccatgggaaaaactcaaatgaaggagatgggttt
gaatatttcaaggcagcaagttgccacacatccaaaaaacagtgggatggggagcaaagc
cctggaggggaacgaaacaggtggaaatgcgaggaatttttagatcatccaggccatatc
cacagtagtccttgtcatgaaaggtccaataatgtctctacactgccatttctgcctggg
gaacagcacccaatactgttaccaccaagaaactgtcaaggggataaaattctggaggaa
aatttcaggtataataactacaaaagaactatgatgacttttaaggagagactagagaac
actgtggaaagatgtgcacacattaatgggaacagacctcgacagagtcggggctttgga
gagctgctgagtaccacaaggcaagacctcgtcctagaggagcagtctccaagctcctca
aatagtttggaaagttctctggtcaaagactacatccattataatggagactttaatgcc
aaaagcattaatgggtgtgtgcctagcccttcagacgctaaaagcattagtagtgaagat
gacctaaggaatccagactccccctcttcaaatgagttgatacattataggccaaggacg
ttcaacgttggcgacttggtctggggccaaatcaaaggacttacttcctggcctggaaaa
ttagtaagagaagacgacgttcacaattcatgtcaacaaagccccgaggaagggaaggtg
gagccggagaagttgaagacactaacagaaggtttagaagcctacagtcgagcccggaaa
aggaacagaaaaagtggaaagctaaataaccatttagaagctgctattcatgaggccatg
agtgaactggacaaaatgtctgggactgttcaccaaatcccacagggagacagacaaatg
agaccccccaaacccaagaggaggaagatctccagataa
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integrated database retrieval system
