Equus caballus (horse): 100050327
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Entry
100050327 CDS
T01058
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04140
Autophagy - animal
ecb04211
Longevity regulating pathway
ecb05010
Alzheimer disease
ecb05014
Amyotrophic lateral sclerosis
ecb05016
Huntington disease
ecb05017
Spinocerebellar ataxia
ecb05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100050327 (RB1CC1)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
100050327 (RB1CC1)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
100050327 (RB1CC1)
05014 Amyotrophic lateral sclerosis
100050327 (RB1CC1)
05016 Huntington disease
100050327 (RB1CC1)
05017 Spinocerebellar ataxia
100050327 (RB1CC1)
05022 Pathways of neurodegeneration - multiple diseases
100050327 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ecb01009
]
100050327 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100050327 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
ecb03029
]
100050327 (RB1CC1)
Protein phosphatases and associated proteins [BR:
ecb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
100050327 (RB1CC1)
Membrane trafficking [BR:
ecb04131
]
Autophagy
Autophagosome formation proteins
ULK complex
100050327 (RB1CC1)
Mitochondrial biogenesis [BR:
ecb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
100050327 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Metal_resist
Jag_N
Motif
Other DBs
NCBI-GeneID:
100050327
NCBI-ProteinID:
XP_001488521
Ensembl:
ENSECAG00000017579
VGNC:
22219
LinkDB
All DBs
Position
9:31500985..31591991
Genome browser
AA seq
1593 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIHTKYKIAIQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENEMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEIKTSTEL
VLSPDMPRTTNKSLLTSFHKSVEHVAPDTTDAESGKEIRESCQSTVQQDETSIDAKDGDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFIAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKRLYEAEKSKRESFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKASMSQTSPQSASSPRIESATG
ITTTTSPRTPPPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTIHQVSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQDTN
ICGKEDSGDHASLNVQLEKCRAVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTA
VEIRNIIEKVKYSLEITLNEKHQKELQSLKSEYEGKLDALTKESEENENKIKKLKGDLVC
LEEVLQNKDNEFALVKHEKEAVICLQNEKDQKLLEMENIMHSQNCEIKELKQSREVVLED
LRKLHVENDERIQLLRAELQCLEQSHLKELEDTLHVRHTQEFEKVMTDHRISLEKLKKEN
QQRIDQIEESHATVIQEKEQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKILLEES
RAQQKESLKSLLEQETENLRTEISNLNQKIQDNNENYQVGLAELRTLMTIEKDQCISELI
SRHEEESNMLKAELNKVTSLHHQAFEIEKKLKREIVELQSKLDSELSALEKQKDEKITQQ
EEKYEAIIQKLEKDKEKCVLSWEQDREQLIQKLNCEKEEAIQAALKEFKLEREAVEKELL
EKVKHLENQIAKSPAIESTREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVR
TSLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQARDKDLIESLSEDRARLLEE
KKKLEEEVSKLRGSSFVPSPYVATASELYGACAPELPGETERSAMETQDEGRMDSAMETS
MMSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDF
QVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVME
KEYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4782 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggttaacacgggaactaccctgacatttgacactgaactt
acagtgcaaactgtggcagacctgaagcatgccattcataccaaatacaagattgctatt
cagcaccaggtgctggtggtcaatggaggagaatgcatggcggcagatcggagagtgtgc
acctacagtgctgggacggacacaaatccaatttttctttttaacaaagaaatgatctta
tgtgatcgtccacctgctattcctaaaactaccttttcaacagaaaatgaaatggaaata
aaagtcgaagagtctcttatgatgcctgcagtttttcacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtc
catgatgaacatcttcaacaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcctaccaaaagctacttttcaagtttgaaagtatttattcaaattatctgcaa
tccatagaagacatcaagttaaaacttactcatttaggaactgcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagagaatgtttgggaagactg
gattctttacctgaacatgaaggctcagaaaaggccgagataaaaacctccactgaactg
gtgctctctcctgatatgcctagaacaactaacaaatccttgttaacctcatttcacaag
tcagtggaacatgtagccccagataccacagatgctgaaagtggaaaagaaattagagaa
tcttgtcaaagtactgtccagcaggatgaaacttcaatagatgctaaagacggtgatctg
cctttttttaatgtttctttgttagactggataaatgttcaagatagaccaaatgatgtg
gaatcgttggtcaggaagtgctttgattccatgagcaggcttgatccaaggattattcga
ccatttatagcagaatgccgtcagactattgccaaacttgataatcagaatatgaaagcc
attaaagggcttgaagataggctctatgccctggaccagatgatcgctagctgtggccga
ctggtgaatgaacagaaagaacttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgttacctgatttgtgcctgagtcatgcaaatcagttgatg
attatgttgcaaaatcatagaaagctgttggatattaaacagaagtgtaccactgccaaa
caagaactagcaaataacctacatgtcagactaaagtggtgttgctttgtaatgcttcat
gctgatcaagatggagagaaattacaagctttgctgcgcctcgtaatagagctcttagaa
agagtcaaaattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaggttgtaaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtc
aaagatggaaagcgattatatgaagctgaaaagtcaaaaagggaatcctttgggaaatta
tttaggaagtcttttttaagaaatcgtctgtttaggggactggactcctggcccccatcc
ttttgtacacaaaagcctcgaaagtttgactgtgaacttccagatatttcattaaaagat
ttacagtttctgcaatcattttgtccttcagaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgctctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagactattacagatctactgagtgaacaaaaggca
tccatgagtcagacatccccacagtcagcttcctcaccaagaatagaaagtgcaacagga
attacaactactacctcaccgagaactcctcctccactcactgttcaggatcccttatgt
cctgcagtgtgtcccttagaagagttatctccagatagcattgatgcacatacgtttgat
tttgaaactatcccccatccaaatatagaacagactattcaccaagtttccttagatttg
gattcattggcagaaagtcctgaatcagattttatgtctgctgtgaatgagtttgtaata
gaagaaaatttatcatctcctaatcctataagtgatcctcaaagtccagaaatgatggta
gaatcactttattcctcagttatcaatgcaatagacagtagacgtatgcaggatacaaat
atttgtggtaaagaggactcaggagatcatgcgtctctaaatgtccaattggaaaaatgt
agagctgttgcccaagactcgcacttcagtatacaaaccatcaaggaagacctttgccac
ttcagaacatttgtacaaaaagaacagtgtgacttctcaaactctttaaaatgtacagca
gtagaaataagaaacattattgaaaaagtaaaatattctttggaaataacactaaatgaa
aaacatcaaaaagaactacagtctttaaaaagtgaatatgaagggaaactcgatgcacta
acaaaggagagtgaagaaaatgaaaacaaaatcaaaaagctgaaaggagacttagtatgc
cttgaggaggttttacaaaataaagataatgaatttgctttggttaaacatgaaaaagaa
gctgtcatctgcctgcagaatgaaaaggatcagaagttgttagagatggaaaatattatg
cacagtcaaaattgtgaaattaaagaactgaaacaatcacgagaggtagtgttagaagac
ttgagaaagctccatgttgaaaatgatgagaggatccagttattgagggcagaacttcag
tgcttagagcaaagtcatctaaaggaattagaggacactcttcatgtcaggcacacacag
gagtttgagaaagttatgacagaccacagaatttctttggagaaattaaaaaaggaaaat
caacaaagaattgatcagatagaagagtctcatgccacagttatccaggaaaaagaacaa
cagctacaggaattaaaactcaaggtttctgatttgtcagacatgagatgtaagttagag
gttgaacttgcactgaaggaagcagaaactgatgaaataaaaattttgcttgaagaaagc
agagcccaacagaaggaatccttaaaatctctccttgaacaagagacagaaaatttgaga
acagagataagtaatctaaaccaaaagattcaggataataatgaaaattatcaggtgggt
ttggcagagctaagaactttaatgacaattgaaaaagatcagtgcatttcagagttaatt
agtagacatgaagaagaatctaatatgcttaaagctgaattaaacaaagtaacatcattg
catcaccaagcatttgaaatagaaaaaaaactgaaaagagaaatagttgaactgcagagt
aaattagactcagaattgagtgctcttgaaaaacaaaaagatgaaaaaatcactcaacaa
gaagagaaatacgaagctattatccagaaacttgagaaagataaagagaaatgtgtcttg
agctgggaacaggacagagaacagttaattcagaagcttaattgtgaaaaagaagaagct
attcaggctgccctaaaagaatttaaattggagagagaagctgttgagaaagagttatta
gaaaaggttaaacatcttgagaatcaaatagcaaaaagtcctgccattgaatctaccaga
gaagattcttcaagcctagttgctgaacttcaagaaaagcttcaggaagaaaaagctaag
tttctagagcaacttgaagagcaagagaagagaaagaatgaagaaatgcaaaatgttcga
acatctttgattgctgaacaacagaccaattttaacactgttttaacgagagagaaaatg
agaaaagaaaacataatcaatgatcttagtgataagttgaaaagtacaatgcagcagcaa
gcgcgagataaagatttgatagagtcactatctgaagatcgagctcgtttgcttgaggaa
aagaaaaaacttgaagaagaagtcagtaagttgcgtggtagcagttttgttccctcaccg
tatgtggctacagcctcagaactttatggagcttgtgcccctgaactcccaggtgaaaca
gagagatcagccatggaaacacaagatgaaggaagaatggattcagcaatggaaacaagc
atgatgtctgtacaagaaaatatccatatgctatctgaagaaaaacagaggataatgcta
ttagaacgaacattacaattgaaagaagaagaaaataagcggttaaatcaaagactgatg
tctcagagcatgtcttcggtatcctcaaggcattctgaaaagatagctattagagatttt
caggtgggagatttggtactcatcatcctagatgaacgccacgacaattatgtattattt
actgttagtccaaccttatattttctgcattcagagtctctgcctgccctggatctcaaa
ccaggtgagggtgcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggaa
aaagaatactgtcaagccaaaaaggcacaaaacagatttaaagttcctttggggacgaag
ttttacagagtgaaagctgtgtcatggaataagaaagtataa
DBGET
integrated database retrieval system
