Equus caballus (horse): 100051155
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Entry
100051155 CDS
T01058
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03013
Nucleocytoplasmic transport
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100051155 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
100051155 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100051155 (THOC1)
03041 Spliceosome [BR:
ecb03041
]
100051155 (THOC1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100051155 (THOC1)
Spliceosome [BR:
ecb03041
]
Complex C
Other components
EJC/TREX
100051155 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100051155 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
100051155
NCBI-ProteinID:
XP_001491940
Ensembl:
ENSECAG00000009267
VGNC:
24082
LinkDB
All DBs
Position
8:complement(43828061..43882344)
Genome browser
AA seq
734 aa
AA seq
DB search
MPSPRGFPTNPTKYCAADSGFQRPPELGPQESSQLPAGPPLGSQAALAVHRAGNLVAPCL
TSSASATARWRASAAGKMSPTPQLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGS
ENEKKCTLDQAFRGVLEEEIINHSSCENVLAIISLAIGGVTEGICTASTPFVLLGDVLDC
LPLDQCDTIFTFVEKNVATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFL
ARLFPLSEKSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEDREEGMDVEEGEMGDDEAP
TTCSIPIDYNLYRKFWSLQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASR
KKMEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNY
VLTDEQSLWIEDTTKSVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKER
TSDTKPTRVVRKRTAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTL
EEFFEEAIEQADPENMVENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLE
NMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENESPDVRRDKPVTGEQIEVFANKLGE
QWKILAPYLEMKDSEIRQIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLS
DLAESLTNDNETNS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcacctcgagggttccccacaaacccgactaagtactgtgcggctgactcaggg
ttccaacgcccacctgaactcggtccccaagaaagctcccaactgccagctggcccgccc
ctgggctcacaggccgctctagccgtgcacagagccggcaatctcgttgctccctgcttg
acgtcatcagcgagcgccacagcgcggtggcgggcaagcgcagccgggaagatgtctccg
acgccgcagcttttcagtttgcccgaagcgcggacgcggttcacgaagtctaccagagag
gccctgaacaacaaaaatattaagccattgttgaataccttcagccagttacctggcagt
gaaaatgaaaaaaaatgtacccttgaccaagctttcagaggtgttctagaagaagaaatt
ataaatcattcatcatgtgaaaacgttttagctattatttctcttgctattgggggagta
actgaaggtatttgtactgcatctacaccttttgtattgttgggagatgttttggattgt
cttcctttggatcagtgtgacacaatattcacttttgtggaaaaaaatgttgctacttgg
aaatcaaatacgttttattctgctgggaaaaattacttactacgtatgtgcaatgatctc
ctaagaagattatcaaaatcccagaatacagtcttctgtggccgaattcaactctttttg
gccaggcttttccctttatctgagaaatcaggtcttaacttgcagagtcagtttaatctg
gaaaatgtcactgttttcaataccaatgagcaggaaagcaccttgggtcagaagcacact
gaggatagagaagaaggaatggatgtagaagaaggtgaaatgggagatgatgaagctcca
acaacttgctccattccaattgattacaacctgtaccgaaaattctggtcacttcaggat
tactttaggaaccctgtgcaatgctatgagaagatttcatggaagacttttctcaagtat
tctgaagaagttctagctgtttttaagagttataaattagatgatactcaggcctcaagg
aagaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaaatttttaaca
agtgaaaagttgatggatttacaactgagcgacagtaactttcgtcgacacatcctgttg
cagtatctcattttattccagtatctcaaggggcaggtcaaattcaaaagttcaaactat
gttttaactgatgagcaatcactctggattgaagatactacaaaatcagtttatcaacta
ctatctgaaaaccctcctgatggagaaagattttcaaagatggtagagcatatattaaac
actgaagaaaactggaactcatggaaaaatgaaggttgcccaagttttgtgaaagaaaga
acatcagataccaagccgacaagagtagtacggaagagaacggcaccagaggacttccta
gggaaaggacccaacaaaaagattctgatgggaaatgaggaattaacaaggctttggaat
ctctgccctgataatatggaagcctgtaaatcagagacaagggaatacatgccaacttta
gaggaattctttgaagaagccattgaacaggcagaccctgaaaacatggttgaaaatgaa
tataaggctgtgaacaattcaaattatggctggagagccctgagactgttagcacggaga
agccctcatttcttccagccaaccaaccagcaatttaaaagtttgccagaatatctcgaa
aacatggtaataaagctagccaaggaattaccacctccttctgaagaaattaaaacaggt
gaggatgaagatgaggaagataatgatgctttactgaaggaaaacgaaagtcctgatgtt
cggcgagacaaacctgtaacaggtgaacaaatagaagtatttgccaacaaactgggtgaa
caatggaagattctggctccctacttggaaatgaaagactcagaaatcagacagattgag
tgtgacagcgaagacatgaagatgagagctaagcagctactggttgcctggcaagatcaa
gagggagtacatgcaacacccgagaatctgattaatgcactgaataagtctggattaagt
gaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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