Equus caballus (horse): 100051418
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Entry
100051418 CDS
T01058
Symbol
SIX4
Name
(RefSeq) homeobox protein SIX4 isoform X1
KO
K15615
homeobox protein SIX4
Organism
ecb
Equus caballus (horse)
Pathway
ecb05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
100051418 (SIX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100051418 (SIX4)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
100051418 (SIX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
100051418
NCBI-ProteinID:
XP_001497969
Ensembl:
ENSECAG00000023515
VGNC:
22995
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Position
24:complement(7936161..7949828)
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AA seq
784 aa
AA seq
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MSSSSPTGQIASAAEIKQENGMESASEGQEAPREVAGGAAAGLSPPAPAPFPLEPGDAAA
AAARVSREEGVVAAAAGATADQVQLHSELLGRHHHAAAAAAAAAQTPLAFSPDHVACVCE
ALQQGGNLDRLARFLWSLPQSDLLRGNESLLKARALVAFHQGIYPELYSILESHSFESAN
HPLLQQLWYKARYTEAERARGRPLGAVDKYRLRRKFPLPRTIWDGEETVYCFKEKSRNAL
KELYKQNRYPSPAEKRHLAKITGLSLTQVSNWFKNRRQRDRNPSETQSKSESDGNPSTED
ESSKGHEDLSPHPLSGSSDGVTNLSLSSHMEPVYMQQIGNAKISLSSSGVLLNGSLVPAS
TSPVFLNGNSFIQGPNGVILNGLNVGNTQTVSLNPPKMASNIVSNGISMTDILGSTSQDV
KEFKVLQSSSANSAATTSYSPSAPVSFPGLIPSTEVKREGIQTVASQDGGSVVTFTTPVQ
INQYGIVQIPNSGANSQFLNGSIGFSPLHLPPVSVAASQGNISVNSSTSDGSTFTSESST
VQQGKVFFSSLAPSAVVYTVPNSGQTVGSVKQEGLERSLVFSQLMPVNQNAQVNENLSSE
NISGSSLHPLASSLVNVSPAQNFSLTPPALLNPAELNTDIADSQPMSAPVASKPTVTSVS
STNYTTLQNCSLITGQDLLSVPMTQAALGEIVPTAEDQVGHPSPAVHQDFVREHRLVLQS
VANIKENFLTNSESKAASNLLMLDSKSKYVLEGMVETVCEDLETDKKELAKLQTVQLDED
MQDL
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcttcctcccccaccgggcagattgcaagtgcggcggagatcaagcaggagaat
gggatggaaagcgcctcggaagggcaggaggcgccccgagaagtggcggggggcgcggcg
gcggggctgagccccccggctccagcccctttccccctggagccgggggacgccgcggcc
gccgccgccagggtgagtcgagaggaaggggtggtggcggcggcggccggagcgacggcg
gatcaggtacaactccactcggaacttctgggcaggcaccaccatgccgcggccgccgcc
gccgccgccgcgcagaccccactggccttctcgcccgaccatgtcgcctgcgtgtgcgag
gcgctgcagcaggggggtaacctggaccgcctggccaggttcctgtggtccctgccccag
agcgacctgctacgtggcaacgagagcctgctgaaggcgcgggcgctggtggccttccac
cagggcatctaccccgagctctacagcatcctcgagagccacagcttcgagtcggccaac
cacccgctgctgcagcagctctggtacaaggcgcgctacaccgaggccgagcgcgcccgc
ggccggccgctgggcgccgtggacaagtacaggctgcgcaggaaattccccctgccccgc
accatctgggacggcgaggagacggtgtattgtttcaaggagaagtcgcgcaacgcgctc
aaggagctctacaagcagaatcgctacccttcgcccgccgagaagcggcacctggccaag
atcaccggcctctccctcacccaggtcagcaactggttcaagaaccgccggcagcgcgat
cggaacccctcggagacccagtccaaaagtgagtcagatggcaatcccagcactgaagat
gaatccagcaagggccatgaggatttgtctcctcatccactctccggttcttccgatggt
gtcaccaacctcagcctttccagtcacatggagccagtttatatgcaacaaattggaaat
gctaagatatcattaagctcttctggagttttgttgaatggaagcttggtacctgcaagt
acttcacctgtcttccttaatggtaattctttcattcagggacctaatggagttatcctt
aatggattgaatgtgggaaatacacagacagtgtcattgaacccaccaaaaatggcatcc
aacattgtgagcaatggtatatccatgactgacatactggggtctacctcccaggatgtg
aaggagttcaaagtcctccagagttcttcagctaactcagcagccaccacctcctacagc
cccagtgcccctgtgtccttcccagggctgatacccagcactgaggtaaaaagagaaggc
attcaaacagtggcttcccaggacggaggctctgtagtgacttttactacacccgtgcag
attaaccagtatggcattgtccagatccccaattccggagcaaacagccagttccttaat
gggagcattggattctctccactgcacctgcctcctgtttcagtggcagcttcacaaggt
aatatttcagtaaattcaagcacttcagatgggagcacatttacaagtgagtccagcaca
gtccagcaaggaaaggttttcttcagctctcttgctcccagtgcagtggtatacactgtt
cctaattcaggccaaactgtagggtctgttaaacaagagggcttggagaggagcctggta
ttttctcagttgatgcccgtcaatcagaatgcacaagtaaatgaaaacctgtcttcggaa
aatatctccgggagtagcctccatccactggcctcctcattagttaatgtatccccagct
caaaatttttccctgactccccctgccctcctaaatcctgccgagctgaacactgacatt
gctgatagccagccaatgtctgcccctgtggctagcaaacctactgtgacgtctgtcagc
agcaccaactatacaactcttcagaactgttcccttattactggtcaagatctgttgtca
gtccccatgacccaggctgcccttggagaaatcgttcctacggctgaagaccaggtgggt
cacccctccccagcagtacaccaggattttgtcagagaacatcgtttggttctgcagtca
gtagctaacataaaagagaatttcttaacaaattctgagagcaaagcagcaagtaactta
ctgatgctggactccaaatccaagtatgtcctagagggcatggtcgagactgtctgtgaa
gacctggaaacagacaaaaaagagcttgccaagctccaaactgtccagttggatgaagat
atgcaagacttataa
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