Equus caballus (horse): 100051546
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Entry
100051546 CDS
T01058
Symbol
RARB
Name
(RefSeq) retinoic acid receptor beta isoform X1
KO
K08528
retinoic acid receptor beta
Organism
ecb
Equus caballus (horse)
Pathway
ecb05200
Pathways in cancer
ecb05222
Small cell lung cancer
ecb05223
Non-small cell lung cancer
ecb05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100051546 (RARB)
09162 Cancer: specific types
05226 Gastric cancer
100051546 (RARB)
05222 Small cell lung cancer
100051546 (RARB)
05223 Non-small cell lung cancer
100051546 (RARB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecb03000
]
100051546 (RARB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ecb03310
]
100051546 (RARB)
Transcription factors [BR:
ecb03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
100051546 (RARB)
Nuclear receptors [BR:
ecb03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
100051546 (RARB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
100051546
NCBI-ProteinID:
XP_001494165
Ensembl:
ENSECAG00000016976
VGNC:
22185
UniProt:
A0A9L0R765
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Position
16:complement(59028553..59194966)
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AA seq
448 aa
AA seq
DB search
MFDCMDVLSVSPGQILDFYTASPSSCMLQEKALKACFSGLTQTEWQHRHTAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMIYTCHRD
KNCVINKVTRNRCQYCRLQKCFEVGMSKESVRNDRNKKKKEPSKQECTESYEMTAELDDL
TEKIRKAHQETFPSLCQLGKYTTNSSADHRVRLDLGLWDKFSELATKCIIKIVEFAKRLP
GFTGLTIADQITLLKAACLDILILRICTRYTPEQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPLEMDDTETGLLSAICLICGDRQDLEEPTKVDKLQEPLLEALKIYIRKRR
PSKPHMFPKILMKITDLRSISAKGAERVITLKMEIPGSMPPLIQEMLENSEGHEPLTPSS
SGNTAEHSPSISPSSVENSGVSQSPLVQ
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactgtatggatgttctgtcagtgagtcctgggcaaatcctggatttctacact
gcgagtccgtcttcctgcatgctccaggagaaagctctcaaagcatgcttcagtggattg
acccaaaccgaatggcagcatcggcacactgctcaatctattgaaacacagagcaccagc
tctgaggaactcgtcccgagccctccgtctccacttcctccccctcgtgtgtacaaaccc
tgcttcgtctgccaggacaagtcatcggggtaccactatggagtcagcgcctgtgagggg
tgtaaggggtttttccgcagaagtattcagaagaacatgatttacacttgtcaccgagat
aagaactgtgttattaataaagtcaccaggaatcgatgccagtactgtcgactccagaag
tgctttgaagtgggaatgtccaaagaatctgtcaggaatgacaggaacaagaaaaagaag
gagccttcgaagcaggaatgcacggaaagctatgaaatgacggctgagctggatgatctc
acagagaagatccgaaaagctcaccaggaaaccttcccctcgctctgccagctgggtaaa
tacaccacgaattccagcgctgaccatagagtccgactggacctgggcctctgggacaaa
ttcagcgaactggccaccaagtgcattattaagatcgtggagtttgctaagcgtctgccg
ggcttcactggcctgaccatcgcagaccaaatcaccctgctgaaggccgcctgcctggac
atcctgattcttagaatttgcaccaggtataccccagaacaagacaccatgactttttca
gatggccttaccctaaatcgaactcagatgcacaatgctggatttggtcctctgactgac
cttgtgttcacctttgccaaccagctcctgcctttggaaatggatgacacagaaacaggc
cttctcagtgccatctgcttaatctgtggagaccgccaggatcttgaggaaccaacaaaa
gtagataagctacaagaaccattgctggaagcactaaaaatttatatcagaaagagacga
cccagcaagcctcacatgtttccaaagatcttaatgaaaatcacagatctccgcagcatc
agcgctaaaggtgcagaacgtgtaattaccttgaaaatggaaattcctggatcaatgcca
cctctcattcaggaaatgctggaaaattctgaaggacatgaacccttgaccccaagttca
agtgggaacacagcagagcacagtcccagcatctcacccagttcagtggaaaacagcggc
gtcagccagtcaccactggtgcaatga
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