Equus caballus (horse): 100051687
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Entry
100051687 CDS
T01058
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100051687 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100051687 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100051687 (PBRM1)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100051687 (PBRM1)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100051687 (PBRM1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
100051687 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
100051687
NCBI-ProteinID:
XP_005600625
Ensembl:
ENSECAG00000000555
VGNC:
21184
UniProt:
F6WW81
LinkDB
All DBs
Position
16:36575613..36697795
Genome browser
AA seq
1725 aa
AA seq
DB search
MRRLAFRGAGCALVKLKKLDSMGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLS
NLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQ
KLKMEEYDDVNLLTADFQLLFNNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADD
EDDDEDGQDNQGTVTEGSSPGYLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPD
YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKI
FYMKKAEIEHHEMAKSNLRMRTSSNLAAARLTGPSHSKSSLGEERNPTSKYYRNKRAVQG
GRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNN
QGQLIAEPFFHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENA
KRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTLDS
EMLGLRRLSSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILE
PMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKE
LGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIF
LRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESL
IYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSL
AEIPAVDPSFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFDVLERARRMNRTDSEIYED
AVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKEKKEKLPKEIEEDKLKREEE
KREAEKSEDSSGAVGLSGLHRTYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLW
EDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYF
KLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANA
DKGDDEKNTDNSEDSRTEDSFNLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCV
FIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEESC
PMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVV
DDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQ
LQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDY
SFGELSRLVGTEWRNLETAKKAEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALM
GVVPPPTPMGMLNQQLTPVAGMMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLP
PGVPGLPGIPPPGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPPGPP
VIQQPTTPMFVAPPPKTQRLLHSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQ
ESRLPSHWLKSKGAHTTMADALWRLRDLMLRDTLNIRQAYNLENL
NT seq
5178 nt
NT seq
+upstream
nt +downstream
nt
atgaggagactggcttttcgaggcgctggttgtgctctggtaaagctgaagaagttggat
tccatgggttccaagagaagaagagctacctccccttccagtagtgtcagcggggacttt
gatgatgggcaccattctgtgtccacaccaggcccaagcaggaaaaggaggagactttcc
aatcttccgactgtagatcctattgctgtgtgccatgaactctacaacaccatccgagac
tataaggatgagcagggcaggctcctctgtgagctcttcattagggcaccgaagcgaaga
aatcaaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacag
aaactaaaaatggaagagtatgatgatgttaacctgctgactgctgacttccagctgctt
tttaacaatgcaaaggcctattataagccagattctcctgaatataaagctgcttgtaaa
ctctgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgat
gaagatgatgatgaggatgggcaagacaatcaaggcacagtgaccgaaggatcttctcca
ggttacttgaaggagatcctggagcagcttcttgaagccatagttgtagccacaaatcca
tcaggacatctcattagcgagctttttcagaaactgccttctaaagtgcaatatccagac
tattatgcgataattaaggagcctatagatctcaagaccattgcccagaggatacagaat
ggaagctacaagagtattcatgcaatggccaaagatatagatctcctcgcaaaaaatgcc
aaaacttataatgagcctggttctcaagtgttcaaggatgcaaattctattaaaaaaata
ttttatatgaaaaaggcagaaattgaacatcatgaaatggccaagtcaaaccttcgaatg
aggacttcatcaaatttggctgcagccaggctgacaggtccttcgcacagtaaaagcagc
cttggtgaagagagaaatcccactagcaagtattaccgtaataaaagagcagtccaaggg
ggtcgtttatcagcgattaccatggcacttcagtatggctcagaaagtgaagaggatgct
gctttagctgctgcacgttatgaagaaggagagtcggaagcagaaagcattacttcgttt
atggatgtttcaaatcctttttatcagctttatgacacagttaggagctgtcggaataac
caagggcagctaatagctgaaccgtttttccatttaccttcaaagaaaaaatatcctgat
tattatcagcaaattaaaatgcccatatcactacaacagatcagaacaaagctaaagaac
caagaatatgaaactttagatcatttggagtgtgatctgaatttaatgtttgaaaatgcc
aaacgctataatgttcccaattcagccatctacaagcgagttctaaaattgcagcaagtc
atgcaggcaaagaagaaggagcttgccaggagagacgacattgaagatggagacagcatg
atttcttcagccacctctgatactggtagtgccaaaagaaaaaggaacactcttgacagt
gagatgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaa
atcttattcaatgttgttcttgaagctcgtgagccaggttcaggcagaagactttgtgat
ctatttatggttaagccatccaaaaaggactatcctgattattataaaatcatcttggag
ccaatggacttgaaaataattgagcataacatccgcaatgacaaatatgcaggggaagag
ggaatgatagaagacatgaagctgatgttccggaatgccaggcactacaatgaggagggc
tcccaggtgtacaatgatgcacatatcctggagaagttactcaaggataaaaggaaagag
ctgggcccactgcctgatgatgatgacatggcttctcccaaactcaagctgagcaggaag
agtggcatttctcctaaaaaatcaaaatacatgactccaatgcagcagaaactgaatgaa
gtctatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatattt
ctgaggcttccttccagatctgagctgcctgactactatctgactattaaaaaacccatg
gacatggaaaaaattcgaagtcacatgatggcaaacaaataccaagatatagactccatg
gttgaggacttcgtcatgatgtttaacaatgcctgtacatacaatgagcctgagtctttg
atctacaaagatgcccttgtcctacacaaagtcttgcttgaaactcggagagacctagag
ggagatgaggactctcatgtcccaaatgtgaccttgctgattcaagagcttatccacaat
ctttttgtgtcagtcatgagtcatcaggatgatgagggaagatgctacagtgattcctta
gcagaaattcctgctgtggatcccagctttccaaacaagcctcctcttacttttgacata
attagaaagaatgttgaaaataatcgctaccggcggctcgatttattccaagagcatatg
tttgacgtattggaaagggcaagaaggatgaatcggacagattctgaaatatatgaagat
gcagtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagag
atcctactttcaccggcactcagctataccacaaaacatttgcataatgatgtggagaaa
gagaaaaaggaaaaattaccaaaagaaatagaagaagataaactaaagcgagaagaagaa
aaaagagaagctgaaaagagtgaagattcctcaggtgctgtgggcctctcaggcttacat
cgcacatacagccaggactgcagctttaagaacagcatgtaccatgttggtgattacgtc
tatgttgagcctgcagaagccaacctacaaccacatatagtctgtattgagagactgtgg
gaagattctgctggtgaaaaatggttgtatggctgttggttttatcggccgaatgaaaca
ttccatctagctacacgaaaatttctagaaaaggaagtttttaagagtgactattacaat
aaagttcccgttagtaaaattctaggaaaatgtgtggtcatgtttgtcaaggaatacttt
aaattatgcccagaaaactttcgagatgaggatgtttttgtctgtgagtcacgatattct
gccaaaaccaaatcttttaagaaaattaaactgtggaccatgcccatcagctcagttagg
tttgtcccacgggatgtgcccttgcctgtggtccgagtggcctctgtatttgcaaatgca
gataaaggggatgatgagaagaacacagacaactcagaggacagtcgaactgaagacagt
tttaacttggaaaaggagaaagaagatgtccctgtggagatgtcaaatggtgaaccaggt
tgccactactttgagcagctccgttataatgacatgtggctgaaggttggcgactgtgtc
ttcatcaagtcccatggcctggtgcgccctcgcgtgggcagaattgaaaaggtatgggtc
cgagatggagctgcatatttttatggccccatattcattcacccagaagagacagaacat
gagcccacaaaaatgttctacaaaaaagaagtgtttctgagtaatctggaagaatcctgc
cccatgacatgtattctgggaaagtgtgctgtgttgtcattcaaggacttcctctcctgc
aggccaactgaaataccagaaaatgacattctgctttgtgagagccgctataatgagagt
gacaagcagatgaaaaaattcaagggactgaagaggttttcactgtctgctaaagtggta
gatgatgaaatttattacttcagaaaaccaattgttcctcagaaggagccatcacctttg
ttggaaaagaagatccagttgctagaagctaaatttgctgagttggaaggtggagatgat
gatattgaagagatgggagaagaggatagtgaggtcattgagcctccttctctacctcaa
cttcagactcccctggccagtgagctggatctcatgccctacacacccccacagtctacc
ccaaagtctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagt
ggctacatcctgttcagcagtgagatgagagctgtgattaaggcccagcacccagactac
tcttttggggagcttagccgactggtggggacagagtggagaaaccttgagacagccaag
aaagcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagca
gcacagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatg
ggggtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgca
ggcatgatgggtggctatccgccaggccttccacctttgcagggcccagttgatggcctt
gttagcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccg
ccaggtgtgcctggcctcccgggcatcccaccaccgggtgtgatgaaccaaggagtggcc
cctatggtagggactccagcaccaggtggaagtccatatggacagcaggtaggagttttg
gggcctccagggcaacaggcaccacctccatatcctggcccacatccaccaggcccccct
gtcatacagcagccaacaacacccatgtttgtggctcccccaccgaagacgcaacggctt
ctccactcagaggcctacctgaaatacattgaaggactcagtgctgagtccaacagcatt
agcaagtgggaccagaccctggcagctcgaagacgtgatgtccatttgtcaaaagaacag
gagagccgcctaccctctcactggctgaaaagtaaaggggcccacactactatggccgat
gccctctggcgccttcgggatttgatgctccgagacaccctcaacattcgccaagcgtac
aatctagaaaacctttaa
DBGET
integrated database retrieval system
