Equus caballus (horse): 100052492
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Entry
100052492 CDS
T01058
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb04110
Cell cycle
ecb04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100052492 (SMC1B)
04114 Oocyte meiosis
100052492 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100052492 (SMC1B)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100052492 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100052492 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_15
AAA_21
AAA_29
CATRA-C
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
100052492
NCBI-ProteinID:
XP_023487312
Ensembl:
ENSECAG00000015746
VGNC:
23329
LinkDB
All DBs
Position
28:complement(42437211..42514316)
Genome browser
AA seq
1235 aa
AA seq
DB search
MGRLELLLVENFKSWRGSQVIGPFRRFTCIIGPNGSGKSNVMDALSFVMGEKTANLRVKN
IQELIHGAHIGKPVSSSASVKIVYVEESGEEKTFARIIRGGCSEFRFNDNPVSRSAYIAE
LEKIGIIVKAQNCLVFQGTVELISMKKPKERTQFFEEISTSGELVGEYEEKKRKLQKAEE
DAQFNFNKKKNVAAERKHAKLEKEEADRYQSLLEELKMNKIQLQLFQLYHNEKKIHLLNT
ELEHVNRDLSITKESLSHHENIVKTKKKEHGMLTRQLQQTEKELKSLEALLNQKRPQYIK
AKENTSYHLKKLDLAKKSIKDSEKQCSKQEDDIKALETELVDLDGAWRSFEKQIEEEILR
KGRDIELEASQLDRYKELKEQVRRKVAIMTQQLKKLQWEQKADEERLAFEKRRHKEVQEN
LKQVKEQIEDHKKRIEKLEEYTKTCMDCLKEKKQQEETLVDEIEKAKSRMSEVNEELNFI
RNELQNAGIDSHEGKRQQKREEVLEHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVARDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMMIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFNGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARCWDEKELKNLRDRRTQLVQELKDLMKTLRKEADLKQIRTLAQGTHTRLKYSQSELE
MIKKKQLAAFHREQSQLQSELLNIESQCAMLSEGIKERRQRMEAFQKKIDKVEDDIFQHF
CEEIGVENIREFENKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKKLNKINTLKE
TIQKGGEDIDNLKKAEEDCLHIVDELMAKRQQLKDVFVTQNSNIEKIQAQLEEDRKKFLA
VDREVGKLQRKAVVIQTSLEQKRLEKHNMLLNCKVQDIEIVLLLGSLDDIIDVELGTEAE
STQATIDIYEKEEAIEIDYSSLRKDLKALQSDNEIEAHLRLLLQQVASQEDVLLKTAAPN
LRAVENLKTVRDKFQESTDAFEASRKEARMCRQEFEQVKKRRYDLFSQCFEHISIAIDQI
YKKLCRNNSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIKEQTQEQFQMIVISLKEEFYSKADALIGIY
PEQDDCMFSRVLTLDLSQYPDTEGRESSKRQRESR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccgtttggagctgctgctcgtggagaactttaagtcgtggcggggcagccaggtc
atcggccccttcaggaggttcacctgcatcatcggccccaacggctccggaaaatctaat
gtaatggatgcacttagttttgtaatgggagagaaaacagctaatttaagagtgaaaaat
attcaagaacttattcatggagctcatattggaaaacctgtttcttcttctgcaagtgta
aaaattgtatatgtggaggaaagtggagaagagaaaacatttgcaaggattattcgaggg
ggatgctcagaatttcgttttaatgataatcctgtgagtcgttctgcttacatagcagag
ttggaaaagataggtattatagtcaaagcacagaactgtctagtttttcagggaactgta
gagttgatttcaatgaaaaaacccaaagaaagaacccagttttttgaggaaatcagcact
tcaggagagcttgtaggagaatatgaggaaaagaaaagaaagttacagaaagctgaagag
gacgcacagtttaattttaataagaaaaaaaatgtagctgcagagcgaaaacatgcaaag
ttagagaaagaagaggcagaccgttaccagagtctcctcgaagaactgaaaatgaacaag
atacaactgcagcttttccaactatatcataatgagaaaaaaatccatcttctgaacact
gagttagagcatgtgaatagggatttgagtatcacaaaagagtctctttctcatcatgag
aacatagttaaaaccaagaaaaaggaacatggaatgctaactagacaactacaacaaaca
gaaaaagaattaaaatctcttgaagcacttttaaatcagaagagacctcagtatattaaa
gccaaagaaaacacttcttaccacctcaagaaattagatctggctaagaaatcaataaag
gacagtgaaaaacaatgttctaaacaggaagatgacataaaagccctggagacagagctg
gttgatttagatggtgcatggagaagttttgaaaagcagattgaggaggaaatcttacgt
aaagggcgagacattgaactagaagccagtcagctggatcgttataaggaacttaaggaa
caagtaagaaggaaagtggctataatgacccaacaactgaaaaaactgcagtgggaacag
aaggctgatgaagaaagactggcatttgaaaagaggaggcacaaagaagttcaggaaaat
ctaaaacaagtaaaagaacaaatagaagatcataaaaaacgaatagagaaattggaggag
tatacaaaaacatgcatggattgcttgaaagagaaaaaacagcaagaggaaaccctagtg
gatgaaattgaaaaagcaaaatcaagaatgtctgaagttaatgaagagctgaattttatt
agaaatgaattgcagaatgctggaattgatagccatgagggaaaacgtcagcaaaagaga
gaagaagttctggaacaccttaaaagactttacccagactctgtgtttggaagactactt
gacctgtgtcatcctattcataagaaataccagctggctgttactaaactttttggtcgg
tacatggttgccattgttgtagcgtctgaaaaggtagcaagagattgtattcgatttctg
aaggaggaaagagctgaacctgagacattccttgctctagattaccttgatatcaagcca
atcaatgaaagattaagggagattaaaggctgtaagatgatgatagatgtcataaagact
cagtttcctcagctgaagaaagtaattcagttcgtgtgtgggaatggccttgtctgtgag
actgtggaagaagcaaggcatattgcattcaatggacctgaaagacggaaaacagtagcc
cttgatggaactttatttttaaaatctggagtgatctctggagggtcgagtgatttaaaa
tacaaggctagatgctgggatgagaaagagttaaagaatttaagagacagaagaacccag
ttagtccaagaattaaaggatttaatgaagacacttcgcaaggaagcagatttgaaacaa
atacgcactctagcacaaggaactcatacacgactcaaatattcgcaaagtgaactggag
atgattaaaaagaagcagcttgctgcttttcaccgggaacaatctcagctacaaagtgaa
ctactaaatattgagtctcaatgtgctatgttgagtgaaggaatcaaagaacgacgacaa
agaatggaagcatttcaaaaaaagatagataaggttgaagatgatattttccaacacttc
tgtgaagaaattggtgtggaaaatattcgtgaatttgagaacaaacatgttaaacagcaa
caagaaattgatcaaaaaagattagaatttgagaaacaaaaaactcggcttaatgtccaa
ctcgaatatagtcgcaatcagctgaagaagaaactgaataagatcaacacattaaaagaa
actatccagaaaggtggagaagacattgataacctaaagaaggctgaggaagattgtctg
cacattgtagatgaactcatggcgaagcggcagcaacttaaggacgtgtttgtcactcag
aattccaacattgagaaaatccaagctcaacttgaagaggatcggaagaagtttttggct
gttgatagggaagtggggaaattgcaaagaaaggctgtagtcattcaaacgtctctggaa
cagaaacggttagagaagcataacatgctgcttaactgcaaagttcaagacattgaaata
gttcttttgttggggtcgttggatgacatcattgacgtggagttgggaactgaagcagaa
agcacccaggcaacaattgatatatatgaaaaagaagaagccattgagatagactacagc
tccctaagaaaggatttgaaggctctacaatccgataacgaaatcgaggcccaccttaga
ctcctgctacagcaagtcgcatcccaggaagacgtcctgttgaagacagcggccccaaac
ctgagagccgtggagaacctaaaaactgtcagagacaagtttcaggagtccacagatgct
tttgaggccagcagaaaggaagccagaatgtgtaggcaagagtttgaacaggtgaaaaaa
aggagatatgatcttttcagccagtgttttgagcacatctcaatcgcaattgatcaaatc
tacaagaagctctgcagaaacaacagtgcccaagcatttcttagcccagagaacccagaa
gagccttacctggagggaattagctataactgcgtggccccaggcaaacggttcatgcca
atggacaatttgtcagggggagaaaagtgcgtggcagctttggctctcctgttcgctgtg
cacagttttcggcctgctccattctttgttttagatgaagtggatgcagccctggacaat
actaacattggcaaagtatcgagttacatcaaagagcagactcaagaacagtttcagatg
atagtcatttccctgaaagaggagttctattccaaagccgacgcgctgataggcatctat
ccggagcaagatgactgcatgttcagccgagttttgaccctagatctttctcagtatcca
gacactgaaggccgagagagcagcaagagacagcgcgagtcccgttag
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