Equus caballus (horse): 100053012
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Entry
100053012 CDS
T01058
Symbol
RNF17
Name
(RefSeq) RING finger protein 17 isoform X1
KO
K18405
tudor domain-containing protein 1/4/6/7
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100053012 (RNF17)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Gene silencing
piRNA pathway
100053012 (RNF17)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TUDOR
Agenet
SNase
zf-RING_5
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
100053012
NCBI-ProteinID:
XP_023477110
Ensembl:
ENSECAG00000017152
VGNC:
22453
LinkDB
All DBs
Position
17:254983..407599
Genome browser
AA seq
1648 aa
AA seq
DB search
MAADTSTARFALSSYRQMGPRSRPWGASEVQCTRCGRRVSRASGQHHELQCGHDFCELCL
LITEEYNTIVCPDCEVATTINTRQGYYPIDGCIKEDSLIEKLQPEKIKNCSQDFKKTADQ
LTIGSAHSTSTHRSVLNPSTVMAETKTAEEIDEALKIAGYNFEQLSIAVKMLEHIHNQAK
EERVSLIEILEKQFDQLFTSLSSRKKNLCEEVVRSTDDYLSNVIMAKSYIEGKKNDLDAA
MKIARELKSAPSLRMYCDLNQIIRTLKLTFESELSQVSTLKLRNSPRLNMNCSEIVCMFN
NMGKIEFENSTNRCDPQENEIGQNGQKKYKKELFCRDSYPSLERKKVDMSVLTNEASPAP
LQRKTNSVHLEAKDIQPQKEVVATMSSKTIAALPQMGSSPDVIIEEIIEENLETCVTDYL
VETPKYPKKPLQKKSSVPFGSKAGSPELVFVSHVIHPCHFYIRKYSQIKDATVLEKEVNQ
FCSKSLQLDPSDILELGARIFVNSVENGMWCRGTITELIPIASENIRKLCSPIKFSVREV
ALIQIFMVDFGNSEVLIVAGVGDTHVRAEHIAEQHIVLNDLCLVLRKSEPYVEELLKDIQ
PLAQPCSLKDIVPQTSNEGWGEEAKVEFLKMVNNKAVLMKVFREEDGVLIVDLQKPPTNK
ISSDMPVSLRDALVFMELARFRSQSPRSHSEKNMTLNYHPPILPKERTDVSVMVCHINSP
TDFYLQLIESLDFLILLKTIEEFYKSEDGENLEILCPVQDQACVAKFEDGVWYRAKVIGL
PGHREVEVKYVDFGNTAKVTLKEMRKIKDEFLNPPEKAIKCKLAYIEPCKRTMQWSKKAK
EKFEEKTQDKFMTCSVIKILEDNVLLVELFDSLGAPGMTPTSISDQLVKEGLASYEVGYT
LKDNSKKHVEVWDPSPEEIISNEVNSLNPVSAKSLPNENLQSLYNKELPVHICNVVSPEK
IYVQWLLTENLLNSLEEKMVAAYENSKWEPIKWENDMHCAVQIPDKNQWRRGQIIRMVTD
TLVEVLLYDVGVELVVNIKCLRELQENLKTMGRLSLECSLVDIRPTGGSDKWTATACDCL
SLYLTGAVATIILQENNTTWPLPVKIFCRDEKGERVDVSKYLIKKGLALRERRINTLDNS
HSLFEKSLETPLEQEDSMDTKCIKINFDPDKKAADIISEHKVSKFKEKILEPRTTGCYKP
PAIPNMKVLEAVVSCVGDDGTIFVIPKLSEFELIKMMNEIQSNLKCLGLLEPYFWEKGEA
CAVRGSDTLWYRGKVMEVVGGIIRVQYLDHGFTEKIPQCHLYPILLYPDTPQFCIPCQLY
NTIPVGNVWQPDAIELLQELLSKREVQVHVMELPENPWGKLSIHLYFDGMSLSYFMAHHK
YCTFEHYEEILKEKPTDYNKKYEEERWEIRFEELLLSETETPILPPYLSSSLPPTEELYA
VQVKHIVSPDEVYICLDSVENCNLCNQHSDTDDSGVSWESESQSLDEALRRFNKNVETFP
PLTDFRTEMPCLAEYDDGLWYRAKIVSIKEFNPLAVLVQFVDYGSTEKLTINRLRQIPLH
LMQYPARAIKVLLAGFKPPLRESGKTRIPYCPKWSMEALWAMIDCLQGKQLYASSMAQVP
EQIVTLYEDEQYPVHMSLVEMGLADQDE
NT seq
4947 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagacacttcgacggctcggttcgccttgtcttcctatcggcagatggggccg
cggagtcggccctggggtgccagcgaggttcagtgcactcggtgtggaagaagggtgtcc
agagcttcgggtcaacaccatgaacttcagtgtggacatgatttttgtgagctgtgcttg
ttaataactgaagaatacaacacaattgtatgccctgattgtgaggttgctacaaccata
aatacaagacaaggctactatccaatagatggatgtattaaagaagattctttgattgaa
aaactacagcctgaaaagataaagaattgttctcaggacttcaaaaagactgctgatcag
ctaactattggttcagcgcattcaacctccacacacaggagtgttttgaacccatcaact
gtaatggcggagactaaaactgcagaagaaattgatgaagcattaaagatagcaggctat
aattttgaacaattaagtattgctgtgaaaatgcttgaacatatacacaatcaagcaaaa
gaagagagagtcagtcttatagagattctggagaaacagtttgatcagctttttacttct
cttagttccaggaaaaagaacctctgtgaagaagtagtaagaagtacagatgattattta
tcaaatgtaataatggctaaaagctacattgaaggaaaaaaaaatgatttggatgcagct
atgaaaatagcaagagagttaaaatcagcaccttccctaaggatgtattgtgacctgaat
cagattatccggactttgaagttaacatttgagagtgaattgtcacaagttagcactcta
aaactaaggaactctcccaggttgaatatgaattgcagtgagatcgtctgcatgttcaac
aatatgggaaagattgaatttgagaactcaactaacaggtgtgatccccaagaaaatgaa
attggacagaatggtcaaaagaaatataaaaaggaacttttttgtcgtgattcataccca
tcactagaaaggaaaaaggttgacatgtctgtcctaactaatgaagcctcaccagctcct
ttgcaacggaaaaccaacagtgtgcatttagaagccaaagacatccagccacagaaagag
gtggttgcaacaatgtcctctaaaaccattgctgctctccctcagatgggatctagccct
gatgtgataattgaagaaattattgaagaaaacctggaaacttgcgtcacagattatctt
gtggagacacctaaatatccaaaaaagcctcttcagaaaaaatcatctgttccttttgga
tcaaaagcaggctctccagagctggtttttgtaagccatgtaatacatccttgccacttc
tacattcggaagtattcacaaataaaagatgcaacagtactggaaaaggaggtgaatcag
ttttgcagtaagagtttacagcttgatccttctgacattttggagctaggtgcaagaata
tttgtcaacagtgttgaaaatggaatgtggtgtcgaggaactatcactgaattaattcca
atagcaagtgaaaatattagaaaactttgtagtccaatcaaattctcagtccgtgaagtt
gcactaatacaaatattcatggtagattttggaaattctgaagttctaattgttgcagga
gttggtgatacccatgtgagagcagaacacattgctgagcagcatatagtactaaatgac
ttatgtctggttctgaggaaatctgaaccgtatgttgaagagctgctgaaagacatccag
ccattagcacagccatgctcattgaaagacattgttccacagacttcaaatgaaggctgg
ggagaagaagctaaagtagagtttttgaaaatggtaaataacaaggctgttttaatgaaa
gtgttcagagaagaagatggcgtgcttattgtagatctgcagaaaccaccaacaaataaa
ataagcagtgacatgcctgtgtctcttagagatgctttagtttttatggaactggcaagg
tttaggtcacaatcaccaagaagtcactctgaaaaaaatatgactttaaactatcatcca
ccaattttgcctaaagaaaggacagatgtttcagttatggtttgtcatataaacagtcct
actgatttctatcttcagttgatagagagcctggattttttgattctattaaagacaatc
gaggaattctataaaagtgaagatggggaaaatctggaaatcctctgtccagttcaagat
caagcctgtgtagctaaatttgaagatggagtttggtaccgagcgaaagtcattggattg
cctggacatcgtgaagttgaagttaaatatgtggactttggcaatactgcaaaagtaaca
cttaaagaaatgcgtaaaataaaggatgaatttctgaatcccccagagaaggcaattaaa
tgtaagctggcctatattgaaccatgtaaaaggacaatgcagtggtcaaaaaaagctaaa
gaaaagtttgaagaaaagactcaagataaatttatgacatgttcagttattaaaattctg
gaagataatgtgctgttggttgagcttttcgattctcttggtgctcctggaatgactcct
actagtattagtgaccagctagtcaaagagggcctagcatcttatgaagtaggatatacc
ctcaaagataattccaaaaagcatgttgaagtatgggatccttctccagaagaaattatt
tcaaatgaagtaaacagtttaaatcctgtgtctgcaaaatctctacctaatgagaatctc
caatcactttataataaggaactgcctgtgcatatctgtaatgtagtatctcctgagaag
atttatgttcagtggttattgacagaaaacttacttaatagtttagaagaaaagatggta
gctgcttatgaaaactcaaaatgggaacctattaagtgggaaaatgatatgcactgtgct
gttcagatcccagataaaaatcagtggcgaagaggccagatcatcagaatggttacagac
acgttggtagaggtcttgctgtatgacgtgggtgttgaactagtagtgaatattaaatgt
ttgagagaacttcaagaaaacctaaagacgatgggaagattatctttggaatgctctctt
gttgatataagaccaactggtgggagtgacaagtggacagcgacagcttgtgactgtctt
tcattgtacctaactggagctgtagcgactataatcttacaggaaaacaatacaacatgg
ccattacctgtgaaaattttctgcagagatgaaaaaggagagcgagttgatgtttctaaa
tatttgattaaaaaaggtttggctttgagagaaaggagaattaatacattagataacagc
cattcgttatttgagaagtctctggaaacccccctagaacaagaagattcaatggatact
aagtgtattaaaattaactttgaccctgacaaaaaagctgctgacattatcagtgaacac
aaggtgtctaaatttaaggagaaaattctagaaccaagaactactggatgctataagcca
ccagctattcctaacatgaaagtattggaggcagtagtcagctgcgttggtgatgatgga
actatattcgtaatacctaaattgtcagaatttgaactaataaaaatgatgaatgaaatt
cagagtaatttaaaatgccttggtcttttggagccttatttctgggaaaaaggagaagcc
tgtgcggtgagaggatcagatactctgtggtatcgaggcaaagtgatggaagtcgtcggt
ggcatcatcagggtacagtatttagatcacggattcactgagaagattccacagtgccat
ctttaccctattttgctgtatcctgatacaccccagttttgtattccttgtcagctctat
aataccataccagttgggaatgtctggcagccagatgcaatagaactccttcaggagctg
ctttcaaagagagaggtgcaagtgcacgttatggaattacctgaaaatccatgggggaaa
ttatctattcatctctattttgatggaatgtcgctttcttattttatggcacaccataaa
tattgtacttttgaacattatgaggagatactgaaagaaaaaccaacagattacaataaa
aagtatgaggaggaaagatgggaaataaggtttgaggaattgcttttgtctgaaacagag
acgcctatattaccgccatatttgtcttcatctctgcctcccacagaagagctctatgca
gttcaggtcaagcacattgtctcccctgatgaagtgtatatttgccttgattctgtagaa
aattgtaatctgtgtaaccagcatagtgacacagatgacagtggagtcagctgggaatct
gagtctcagagccttgatgaagcactgcggaggtttaataagaatgtggagacgtttcct
cctctgacggacttcagaacagaaatgccctgccttgcagaatatgatgatggcttatgg
tatagagcaaaaattgtttccattaaagaatttaatcctctagctgtcctggtacaattt
gttgattatggatcaactgaaaagctgacaataaacagattgcgtcaaattcctcttcac
cttatgcagtatccagcccgagccataaaagttctcttggcagggtttaaacctcccttg
agagagtcaggaaagacaagaataccatattgtcccaaatggagcatggaagcactgtgg
gctatgatagactgtcttcaaggaaaacaactttatgcttcttctatggctcaggtgcca
gaacaaatagtgacattatatgaagatgaacagtatccagttcatatgtcattagtagaa
atggggctcgcagaccaagatgaatga
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integrated database retrieval system
