Equus caballus (horse): 100053070
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Entry
100053070 CDS
T01058
Symbol
ACTN1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
ecb
Equus caballus (horse)
Pathway
ecb04510
Focal adhesion
ecb04520
Adherens junction
ecb04530
Tight junction
ecb04670
Leukocyte transendothelial migration
ecb04810
Regulation of actin cytoskeleton
ecb05146
Amoebiasis
ecb05203
Viral carcinogenesis
ecb05322
Systemic lupus erythematosus
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100053070 (ACTN1)
04520 Adherens junction
100053070 (ACTN1)
04530 Tight junction
100053070 (ACTN1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
100053070 (ACTN1)
09150 Organismal Systems
09151 Immune system
04670 Leukocyte transendothelial migration
100053070 (ACTN1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100053070 (ACTN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
100053070 (ACTN1)
09163 Immune disease
05322 Systemic lupus erythematosus
100053070 (ACTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecb04131
]
100053070 (ACTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ecb04812
]
100053070 (ACTN1)
04147 Exosome [BR:
ecb04147
]
100053070 (ACTN1)
Membrane trafficking [BR:
ecb04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100053070 (ACTN1)
Cytoskeleton proteins [BR:
ecb04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
100053070 (ACTN1)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100053070 (ACTN1)
Exosomal proteins of colorectal cancer cells
100053070 (ACTN1)
Exosomal proteins of bladder cancer cells
100053070 (ACTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_8
EF-hand_5
XisI
Uds1
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
100053070
NCBI-ProteinID:
XP_023483748
Ensembl:
ENSECAG00000019476
VGNC:
15022
LinkDB
All DBs
Position
24:complement(14894475..14989787)
Genome browser
AA seq
892 aa
AA seq
DB search
MDHYDSQQTNDYMQPEEDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDFR
DGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFIASKGVKLVSIGAEEIVDGNV
KMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGFC
ALIHRHRPELIDYGKLRKDDPLTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIMT
YVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLASDLLEWIRRTIPWLENR
APENTMHAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGRM
VSDINNAWGCLEQAEKGYEEWLLNEIRRLERLDHLAEKFRQKASIHEAWTDGKEAMLRQK
DYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKIC
DQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHT
IEEIQGLTTAHEQFKATLPDADKERLAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEI
NGKWDHVRQLVPRRDQALTEEHARQQHNERLRKQFGAQANVIGPWIQTKMEEIGRISIEM
HGTLEDQLSHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQL
LTTIARTINEVENQILTRDAKGISQEQMNEFRASFNHFDRDHSGTLGPEEFKACLISLGY
DIGNDPQGEAEFARIMSIVDPNRLGVVTFQAFIDFMSRETADTDTADQVMASFKILAGDK
NYITMDELRRELPPDQAEYCIARMAPYAGPDAVPGALDYMSFSTALYGESDL
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggaccattatgattcccagcaaaccaacgactacatgcagcccgaagaggactgggat
cgagacctgctcctggacccagcctgggagaagcagcagagaaagacatttacggcgtgg
tgcaactcccacctccgtaaagcggggacacagatcgagaacattgaggaggacttccgg
gatggcctgaagctcatgctgctgctggaggtcatctcaggtgaacgcttggccaagccg
gagagaggcaagatgagggtgcacaagatctccaacgtcaacaaggccctggatttcata
gccagcaagggggtcaaactggtgtccattggagccgaggaaatcgtggatgggaacgtg
aaaatgaccctgggtatgatctggaccatcatcctccgctttgccatccaggacatctct
gtggaagagacttcggcgaaggaagggctgctcttgtggtgtcagagaaagacagccccc
tacaaaaacgtcaacatccagaacttccacataagctggaaggatggcctcggcttctgt
gccttgatccaccgacaccggcctgagctgatcgactatgggaagctgcggaaggatgat
ccactcacaaacctgaacacggccttcgatgtggcggagaagtacctggacatccccaag
atgctggatgctgaagacattgtcggaaccgcccgaccggatgagaaggccatcatgacc
tatgtgtccagcttctaccatgccttctctggagcccagaaggcggagacagcagccaat
cgcatctgcaaggtgttggccgtcaaccaggagaacgagcagctcatggaagactacgag
aagctggccagcgatctgctggagtggatccgccgcaccatcccctggctggagaaccgg
gcgcccgagaacaccatgcacgccatgcagcagaagctggaggacttccgtgactaccgg
cgcctgcacaagccgcccaaggtgcaggagaagtgccagctggagatcaacttcaacaca
ctgcagaccaagctgcgcctcagcaaccgccccgccttcatgccctccgagggcaggatg
gtctcggacatcaacaacgcctggggctgcctggagcaggcagagaagggctatgaggag
tggctcctgaatgagatccggcggctggagcggctggaccacctggcagagaagttccgg
cagaaggcctccatccacgaggcctggacggacggcaaagaggccatgctgcggcagaag
gactacgagacggccaccctgtcagagatcaaggccctgctcaagaagcatgaggccttc
gagagcgacctggccgcccaccaggaccgtgtggagcagattgctgccattgcacaggag
ctcaatgagctggactattacgactcacccagtgtcaacgcccggtgccaaaagatctgt
gaccagtgggacaacctgggggccctgacccagaagcggagggaagctctggagcggaca
gagaaactgctggagaccattgaccagctgtacctggagtatgccaagcgggctgcgccc
ttcaacaactggatggagggggccatggaggacctgcaggacaccttcatcgtgcacacc
atcgaggagatccagggactgaccacagcccacgagcagttcaaagccaccctccctgat
gccgacaaggagcgcctggccatcctgggcatccacaatgaggtgtccaagattgtacag
acctaccatgtcaacatggcaggcaccaacccctacacaaccatcacgcctcaggagatc
aacggcaaatgggaccatgtacggcagctggtgcctcggagggaccaggccctgacggag
gagcatgcccgccagcagcacaatgagaggctacgtaagcagtttggggcccaggctaac
gtcattgggccctggatccagaccaagatggaggagattgggaggatctccatcgagatg
cacgggaccctggaggaccagctcagccacctgcgacagtatgagaagagcattgtcaac
tacaagcccaagatcgaccagcttgagggcgaccaccagctcatccaggaggcgctcatt
ttcgacaacaagcacaccaactacactatggagcacatccgcgtgggctgggagcagctc
ctcaccaccatcgccaggaccatcaatgaggtggagaaccaaatcctgacccgggatgcc
aagggcatcagccaggagcagatgaatgagttccgggcctccttcaaccactttgatcgg
gaccactccggcacgctgggtcccgaggaattcaaagcctgcctcatcagcttgggctat
gatattggcaacgacccccagggagaggcagaatttgcccgcatcatgagcattgtggac
cccaaccgcctgggggtagtgacattccaggccttcatcgactttatgtcccgtgagacg
gccgacacagatacagcagaccaagtcatggcttccttcaagatcctggccggggacaag
aactatatcacgatggacgagctgcgccgggagctgccgcccgaccaggccgagtactgc
atcgcgcggatggccccctacgccggccccgacgctgtgcctggtgctctggactacatg
tccttctccacggcgctctacggcgagagtgacctctga
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