Equus caballus (horse): 100053934
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Entry
100053934 CDS
T01058
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
ecb
Equus caballus (horse)
Pathway
ecb03082
ATP-dependent chromatin remodeling
ecb04714
Thermogenesis
ecb05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100053934 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100053934 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100053934 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100053934 (SMARCD2)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100053934 (SMARCD2)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100053934 (SMARCD2)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100053934 (SMARCD2)
PBAF complex
100053934 (SMARCD2)
GBAF(ncBAF) complex
100053934 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
100053934
NCBI-ProteinID:
XP_001500883
Ensembl:
ENSECAG00000011370
VGNC:
23326
LinkDB
All DBs
Position
11:15523988..15534182
Genome browser
AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGAPPPPAGPGMLPGPALRGPGPAGGVGGPGAAGFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPAQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcg
gttgccgcggccctcggagcgccgcctccgccagcaggacccggcatgctgcccggaccg
gcgctcagggggccggggccggctggaggcgtggggggccccggagccgccggcttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcggccaggcatgtcaccagggagc
cggatgcccatggctggcttacaggtgggcccccctgctggctctccatttggcacagct
gctccacttcgacctggcatgccacccaccatgatggacccattccgaaaacgcctactc
gtgccccaggcccagcctccgatgcccgcccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcagcgaattcgggagcttgtcccagagtctcaggcatacatg
gatctcttggcttttgagcggaagctggaccagaccattgctcgcaagaggatggagatc
caagaggccatcaaaaagcctctcacgcaaaaacgaaagctgcggatctatatttccaat
acattcagtcccagcaaggcggaaggtgatagtgcaggaaccgcagggacccccggggga
accccagcaggggacaaggtggcttcctgggaacttcgagtggagggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattctttaagagcctcgtcattgagctg
gacaaggaactgtatgggcctgacaaccacctggtggagtggcaccggatgcccaccacc
caggagacagacggtttccaggtgaaacggcctggagacctcaatgtcaagtgcaccctt
ctgctcatgctagatcatcagcctccccagtacaagttggacccccgattggcgaggctg
ctgggggtgcacacacagacaagggccgccatcatgcaggccctgtggctttatatcaaa
cacaatcagctgcaggacgggcacgagcgcgagtacatcaactgcaaccggtacttccgc
cagatcttcagttgtggccgactccgtttctctgagattcccatgaagctggctgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagtgtggaccctaatgaccag
aagaagacagcctgttatgacatcgatgtggaggtggacgacccactcaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagattgcctcccttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacccagagggatttcatgctcagcttt
agcactgacccccaggactttatccaggaatggctccgttcccagcgccgagacctcaag
atcatcactgatgtgattggaaatcctgaggaggagagacgagctgccttctaccaccag
ccctgggcccaggaagcagtggggaggcacatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
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