Equus caballus (horse): 100053962
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Entry
100053962 CDS
T01058
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100053962 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecb03019
]
100053962 (BARD1)
04121 Ubiquitin system [BR:
ecb04121
]
100053962 (BARD1)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100053962 (BARD1)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100053962 (BARD1)
Messenger RNA biogenesis [BR:
ecb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
100053962 (BARD1)
Ubiquitin system [BR:
ecb04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
BRCC complex
100053962 (BARD1)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
100053962 (BARD1)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
100053962 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT
BRCT_2
zf-RING_5
zf-C3HC4
RTT107_BRCT_5
zf-C3HC4_2
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
100053962
NCBI-ProteinID:
XP_023498046
LinkDB
All DBs
Position
6:complement(4739397..4819202)
Genome browser
AA seq
775 aa
AA seq
DB search
MPGNRPPRVRSGNEPRPAPATEPAGPGAWAHSRAALDRLERLLRCSRCTSILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRHLLHGHELSDSKE
DTPGKGLFNDAENKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQMINDENSQQASMYEYVS
PSPTGDVSERAKKASTRSRKKQKKKTLAEINQEWNLEVEKEDGELDPKQECKEKLVSFCS
QPSIIASPQTNGEVDFLASGSVTESESFGSLTEVSLPLAEQIESPEIKSRDEVVTPEKNL
CENYLSSKKSLPLGHSGKRGRRNRLSSPISKRSRSSILSTGGSFVEQTVLSENLPLPGCS
SPPSSKLKVDDALGSKNSNISDESLSLSPGTPSALNSPSYRRMMTSPSAMKLSPNSLMAA
KRNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLRVVELLLQ
HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYADSENMKSL
LLLPEKNESSSTSRCSVMSTGQHRGGPRVLIGSGLSSEQQKMLSELAAVLKAKKCTEFDS
TVTHVIVPGDTIQSTLKYMLGILNGCWILKFEWVKVCLQRKEYEQEEKYEIPEGPQRGRL
NREQLLPKLFDGCYFYFGGTFKHHPKDNLIKLVTAAGGQILSRKPKPDSDVTQTINTVAY
HAKPDSDQRLCTQYIIYEDLSNHRPEKVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgccaggcaaccggccgccgagggtccgctccgggaacgagcctcgacccgcgcccgcc
acggagccggcggggcccggggcctgggcccacagccgcgccgcgctcgaccggctggag
aggctgctgcgctgctcgcgttgcactagtattctgagggagcctgtgtgtttaggagga
tgtgagcacattttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttataccccagcctggatacaagatgtgaagataaacagacagttggacagcatgatc
cagctttgcagtaagcttcgacatttgctgcatggccatgagctttcagattcaaaagaa
gatacacctgggaaaggtttatttaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtcactaaagtttcagtgcaaacc
caacctcaaatgataaatgatgaaaatagtcagcaagcctcaatgtatgaatatgtttct
ccaagtcctacaggagatgtttctgagagggctaaaaaggcttctacaagatctagaaaa
aagcaaaaaaagaaaactctagctgaaatcaaccaagagtggaatttagaggtggaaaaa
gaagatggtgaacttgatcccaaacaggaatgtaaggaaaagctggtctccttctgtagc
caaccatctattattgctagtcctcagacaaatggtgaagtagacttcctggcaagtggc
tctgtaacagaatctgaaagttttggaagcttaactgaagtctctttaccattggctgaa
caaatagaatctccagagattaagagcagagatgaagtagtgactcctgagaagaatctc
tgtgaaaattatctttcttctaagaaatccttgccattaggtcatagtggaaaacgtggt
cgtcgcaacagactttccagtcccatttctaagagatctagaagcagcattctgagcact
ggtggaagttttgtcgagcaaacagtgctctcagaaaacctcccattgcctggctgttct
tcaccaccttcaagcaaacttaaagttgatgacgcattagggagtaaaaacagtaatata
tcagatgagtctcttagtctttcaccaggaacaccctctgcactgaatagtccaagttac
agacgaatgatgaccagcccctcagcaatgaagctgtcacccaacagccttatggctgca
aaaagaaatcatagaggagagactttgctccatattgcttctattaagggtgacatacct
tctgttgaatacctcttacaaaatgggagcgacccaaatgttaaagaccatgctggatgg
acaccattgcatgaagcctgcaatcatgggcacctaagggtagtggaattgttgctccag
cataaggccttggtgaacaccaccgggtatcagaatgactcaccacttcacgacgcggcc
aagaatgggcatgtggatatagtcaagttattactttcctatggagcctccaggaatgca
gttaacatatttggtctgcggcctgtggattatgcggacagtgaaaatatgaaatcgctg
ttgctgctcccagagaagaatgaatcatcatcaactagccgttgctcagtaatgagcaca
ggtcagcacaggggtggacctcgtgtgcttataggcagtgggctttcttcagaacagcag
aaaatgctcagtgaacttgcagcagttcttaaggctaaaaaatgtactgagtttgacagt
acagtaactcacgtcattgttcctggtgatacgattcaaagtaccctgaaatacatgctt
gggattctcaatggatgctggatcctcaaatttgaatgggtgaaagtatgtctacaaaga
aaagaatacgaacaggaagaaaagtatgaaattcctgaaggaccacagagaggcaggctc
aacagagaacagctgttgccaaagctgtttgatggatgctacttctattttgggggaacc
ttcaaacaccatccaaaggacaaccttattaagcttgtgactgcagctgggggccagatc
ctcagcagaaagcccaagccagacagtgacgtgactcagaccatcaatacagtcgcgtac
catgccaaacccgattctgatcagcgcctctgcacgcagtatatcatctatgaggatttg
tctaatcatcgcccagagaaggttcggcagggcaaagtctggatggctccttccagctgg
tttatagattgcgtgatgtcgtttgagttgctccctcttgacagctga
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