Equus caballus (horse): 100054753
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Entry
100054753 CDS
T01058
Symbol
SF3B3
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
ecb
Equus caballus (horse)
Pathway
ecb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100054753 (SF3B3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100054753 (SF3B3)
03041 Spliceosome [BR:
ecb03041
]
100054753 (SF3B3)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100054753 (SF3B3)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
100054753 (SF3B3)
Spliceosome [BR:
ecb03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
100054753 (SF3B3)
Complex B
100054753 (SF3B3)
Complex C
U2 SnRNP specific factors
100054753 (SF3B3)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
100054753 (SF3B3)
TFTC complex
100054753 (SF3B3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Motif
Other DBs
NCBI-GeneID:
100054753
NCBI-ProteinID:
XP_001500880
Ensembl:
ENSECAG00000014053
VGNC:
22890
UniProt:
F7BGG8
LinkDB
All DBs
Position
3:complement(23798063..23850380)
Genome browser
AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGTEKQDELGERGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVAFP
LQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQNEAAFSVAVCRFSNTG
DDWYVLVGVAKDLILNPRSVAGGFVYTYKLVNNGEKLEFLHKTPVEEVPAAIAPFQGRVL
IGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDVQESFIWVRYKRNENQ
LIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDEVDEDPTGNKALWDRG
LLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSMEPNKQKNVSEELDRT
PPEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtacaacttgaccttgcaacgagccactggcatcagctttgccattcatggc
aacttctctggaaccaaacagcaggaaattgttgtttcccgtgggaagatcttggagcta
cttcgccctgaccccaacacgggcaaagtacacactctactaactgtggaagtatttggt
gttatccggtcgctcatggcctttaggctgacaggtggcaccaaagactacattgtggtt
ggcagtgactcaggtcggattgttatcctggaataccagccgtctaagaatatgtttgag
aaaattcaccaagaaacctttggcaagagtggatgccgccgcatcgttcctggccagttc
ttagctgtggatcccaaagggcgagctgttatgattagtgccattgagaaacagaaattg
gtgtatatcttgaacagggatgctgcagcccgacttaccatttcatctcccctggaggct
cacaaagcgaacactttagtatatcatgtggttggtgtagatgtgggatttgaaaatcca
atgtttgcttgtctggaaatggattatgaggaagcagacaatgatccaacaggggaagca
gcggctaatacccagcagacacttactttctatgagttagaccttggtttaaatcatgtg
gtccgaaaatacagtgaacctttggaggaacatggcaacttccttattacagttccagga
gggtcagatggtccaagtggagtgctcatctgttctgaaaactatatcacctacaagaac
tttggtgaccaaccagatatccgctgtccaattcccaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtctgctctgccacccataagaccaaatcgatgttcttc
tttttggcccaaactgagcagggagatatcttcaagatcactttggagacagatgaagat
atggttactgagatccggctcaagtattttgatactgtgcctgttgccgctgccatgtgt
gtgcttaaaacaggcttcctttttgtagcatcagaatttggaaaccattacttatatcag
attgcacatcttggagatgatgatgaagaacctgagttttcatctgccatgcctctggaa
gagggagacacgttcttctttcagccaagaccactcaaaaaccttgtgctggttgatgag
ttggacagcctctctcccattttgttttgccagatagctgatctggccaatgaagatact
ccacagctgtatgtggcctgtggtaggggaccccgatcatctctgagagtcttaaggcat
ggacttgaggtatcagaaatggctgtttctgagctacctggtaaccccaatgctgtctgg
acagttcgtcggcacatagaagatgagtttgatgcctacatcattgtatctttcgtgaat
gccacacttgtcttgtccattggagagactgtggaagaagtgactgactctgggttcctg
ggcaccaccccaacattgtcctgctccttgttaggagatgatgccttggtgcaggtgtat
cctgatggcattcggcacatacgagcggacaagcgagtcaatgagtggaagacccccgga
aagaaaacaattgtgaaatgtgcagtgaaccagcgacaagtggtgatcgccctgacagga
ggagaactggtctattttgagatggatccctcaggacagctgaatgagtacacggagcgg
aaggagatgtcagcagatgtggtttgcatgagtttggccaatgtgccccctggagagcag
agatctcgcttcctggctgtggggctggtggacaacactgtcagaatcatctctctggac
ccctcagactgtttgcaacctctgagtatgcaggctctcccagcccagcccgagtccttg
tgtattgtggaaatgggtggtactgagaagcaggatgagctgggtgagaggggctctatt
ggcttcctatacctgaatattgggctacagaatggtgtgctgctgagaactgtcctggac
cctgtcactggagatctgtctgacacccgcactaggtacctggggtcccgtcctgtgaaa
ctcttccgtgtccggatgcaaggccaggaggcagtcttggccatgtcaagccgttcatgg
ttgagctattcttaccaatctcgtttccatctcacccctctgtcttatgagaccttggaa
tttgcatctggctttgcctctgaacagtgtcctgagggcattgtggccatctccaccaat
accctgaggattttggcgttggagaagctaggtgctgtcttcaatcaagtagcctttcca
ctgcagtacacacccaggaaatttgtcatccaccctgagagtaacaaccttatcatcatt
gagactgaccacaatgcctacactgaggccacaaaagctcagagaaagcagcagatggca
gaggaaatggtggaagcagcaggggaggatgagcgggagctggccgcagagatggcagca
gcattcctcaatgaaaaccttcctgaatccatttttggagcacctaaggctggcaatggg
cagtgggcctctgtgatccgagtgatgaatcctattcaggggaacactctggaccttgtc
cagctggaacagaatgaggctgcttttagtgtggccgtgtgcagattctccaacactggt
gatgattggtatgtgctggtgggcgtggccaaagacctgatactgaaccctcgatctgta
gcagggggttttgtctatacctacaagcttgtgaacaatggggaaaaactggagtttttg
cacaagactccagtggaagaagtccctgctgctattgcccctttccaggggagggtgttg
attggtgtggggaagcttctgcgagtatatgacctgggaaagaagaaattactccgaaag
tgtgagaacaagcatatcgccaattacatctctggaatccagaccattggacatagggta
attgtgtctgatgtccaagaaagtttcatctgggtccgctacaagcgtaatgaaaaccag
ctcatcatctttgctgatgacacctacccacgatgggtcactacagctagcctccttgac
tatgacactgtggctggggcagacaagtttggtaacatttgtgtggtgaggctcccacct
aacacaaatgacgaagtggacgaggatcccacaggaaacaaagccctctgggaccgaggc
ttgctcaatggagcctctcagaaggcagaggtgatcatgaactatcatgtcggggagaca
gtgctgtctttacagaagaccactctgatccccggtggctcagagtcacttgtctatacc
actttgtcaggaggaattggcatccttgttccattcacatcccatgaggaccatgacttc
ttccagcatgtggaaatgcacctacggtctgagcatccccctctctgtgggcgagaccac
ctcagctttcgttcctattactttcctgttaagaatgtgattgatggagacctctgtgag
caattcaactccatggagcccaacaaacaaaagaacgtctctgaagaactagaccgaacc
ccacctgaggtgtccaagaagcttgaggacatccggacccgctatgccttctga
DBGET
integrated database retrieval system
