Equus caballus (horse): 100054946
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Entry
100054946 CDS
T01058
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
ecb
Equus caballus (horse)
Pathway
ecb03030
DNA replication
ecb03410
Base excision repair
ecb03420
Nucleotide excision repair
ecb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100054946 (RFC5)
03410 Base excision repair
100054946 (RFC5)
03420 Nucleotide excision repair
100054946 (RFC5)
03430 Mismatch repair
100054946 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ecb03032
]
100054946 (RFC5)
03036 Chromosome and associated proteins [BR:
ecb03036
]
100054946 (RFC5)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100054946 (RFC5)
DNA replication proteins [BR:
ecb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100054946 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
100054946 (RFC5)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
100054946 (RFC5)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100054946 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
100054946 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_24
AAA_16
AAA_22
AAA_11
AAA_assoc_2
RuvB_N
DEAD
DUF815
AAA_14
ResIII
AAA_5
DNA_pol3_delta
ATPase_2
AAA_19
TniB
PhoH
AAA_30
TIP49
AAA_7
nSTAND3
T2SSE
Thioredoxin_6
bpMoxR
Mg_chelatase
AAA_25
AAA_3
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
100054946
NCBI-ProteinID:
NP_001296126
Ensembl:
ENSECAG00000015326
VGNC:
22322
LinkDB
All DBs
Position
8:complement(17963620..17974491)
Genome browser
AA seq
340 aa
AA seq
DB search
METSAPEQQQSAATAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLQHVVEEEKVAISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALHDILTEIHLFVHRVDFPTSVRIH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVSEA
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggagacctccgcccccgagcagcagcagtccgcggcgacggccaagatcaggaacctg
ccctgggttgaaaagtaccggccacagacactgaatgatctcatttctcatcaggacatt
ttgagtaccattcaaaaatttatcagtgaagaccgcctgccgcacctgcttctctatggt
cctccggggacaggaaagacatccaccatcctcgcctgtgctaaacagctgtacaaagat
aaggaattcggctccatggtcttggagctgaatgcttcagatgaccgaggaatagatatc
gttcggggaccaatcctgagctttgctagcacaaggacaatatttaagaaaggctttaaa
ctagtgatcttggatgaagctgacgccatgactcaggacgcccagaatgccttgaggaga
gtgattgagaaatttactgaaaataccagattttgcctcatctgtaactatctgtcaaag
atcatcccagccttgcagtcccgatgtacaaggttccgatttggtcccctcactccagaa
ctcatggtcccccgccttcagcatgttgtagaagaagagaaagttgctataagtgaagat
gggatgaaagcacttgtaactctctccagtggagatatgcgaagggccctgaacattttg
cagagcaccaatatggcctttgggaaggtgacagaggagactgtctacacctgcacaggg
cacccgctcaagtcagacatcgccaacattctggactggatgttgaatcaagatttcacc
acagcctacagaaatattacagagttgaaaactctcaagggcttggcattacatgatatc
ctgacagagatacacttgttcgtgcacagagttgactttccaacttcagttcgaatacat
ttattgaccaaaatggcagacatcgagtacagactttctgttggcaccaacgagaagatc
cagctgagttccctcattgccgcttttcaagtcaccagagacctgattgtctcagaggcc
tag
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integrated database retrieval system
