Equus caballus (horse): 100055332
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Entry
100055332 CDS
T01058
Symbol
COL6A2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ecb
Equus caballus (horse)
Pathway
ecb04151
PI3K-Akt signaling pathway
ecb04510
Focal adhesion
ecb04512
ECM-receptor interaction
ecb04820
Cytoskeleton in muscle cells
ecb04974
Protein digestion and absorption
ecb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100055332 (COL6A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100055332 (COL6A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100055332 (COL6A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100055332 (COL6A2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100055332 (COL6A2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100055332 (COL6A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ecb04147
]
100055332 (COL6A2)
00536 Glycosaminoglycan binding proteins [BR:
ecb00536
]
100055332 (COL6A2)
Exosome [BR:
ecb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100055332 (COL6A2)
Glycosaminoglycan binding proteins [BR:
ecb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100055332 (COL6A2)
Hyaluronan
Extracellular matrix or blood plasma proteins
100055332 (COL6A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
Ins134_P3_kin_N
Motif
Other DBs
NCBI-GeneID:
100055332
NCBI-ProteinID:
XP_023486103
Ensembl:
ENSECAG00000019436
VGNC:
16747
LinkDB
All DBs
Position
26:42467038..42500784
Genome browser
AA seq
1018 aa
AA seq
DB search
MLRGPCSALLLWGLLGTLHAQQQEVIAPDPSERNSNCPEKADCPVNVYFVLDTSESVTMQ
SPTDSLLYHMQQFVPQFISQLQDEFYLDQVALSWRYGGLHFSDQVEVFSPPNSDRASFIK
SLQSISSFRRGTFTDCALANMTQEIRRHVKKGVNFAVVITDGHVTGSPCGGIKRQAERAR
EEGIRLFAVAPNRNLHEQGLRDIASTPLELYRSNYATMRPDSTDIDQDTINRIIKVMKHE
AYGECYKVSCLEIPGPPGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGPIGFPGPKG
VPGFKGEKGEFGADGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGNRGPDGYVGEAG
SPGEQGDQGAKGDPGRPGRRGPPGEDGAKGSKGYQGNNGSPGSPGVKGAKGGPGPRGPKG
EPGRRGDPGTKGGPGSDGPKGEKGDPGPEGPRGLAGEVGNKGAKGDRGLPGPRGPQGALG
EPGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGEPGEKGEPGPRGPEGGRGD
FGMKGAPGRKGQKGEPADPGPPGEPGPRGPRGEPGLEGEPGPPGDPGLTECDVMTYVRET
CGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPKSETGTRVG
VVQYSHEGTFEAIQLDDERINSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQLIKESRRQ
KTRVFAVVITDGRHDPRDDDLNLRALCNHDVTVTAIGIGDMFHERHESENLYSIACDKPQ
QVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPDLPCQTELYVAQCTQRPVDIVFLLDGS
ERLGEQNFHKARRFVEEVSRRLTLARREDDPLNARVALLQFGGRDEQQVAFPLTSNLTAI
HEALASARYLNSFSHVGAGIVHAINYVVQDARAGARRHAELAFVFLTDGVTGNDSLEEAV
HSMRKQNVVPTVVAVGSDVDADVLSKISLGDAAAVFREKDYDSLAQPGFFDRFIRWIC
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaggcccctgctccgccctcctgctctgggggctcctggggaccctccacgcc
cagcagcaggaggtcatcgcacctgacccctcggagagaaacagtaactgcccagagaaa
gccgactgccccgtcaacgtgtacttcgtgctggacacctcggagagcgtcaccatgcag
tcgcccaccgacagcctgctctaccacatgcagcagttcgtgccgcagttcatcagccag
ctgcaggacgagttctacctggaccaggtggccctgagctggcgctacggcggcctgcac
ttctccgaccaggtggaggtgttcagcccgccgaacagcgaccgcgcctccttcatcaag
agcctgcagagcatcagctccttccgccgcggcaccttcaccgactgcgcgctggccaac
atgacccaggagatccggcggcacgtgaaaaagggggtcaacttcgcggtggtcatcacc
gacggccacgtcaccggcagcccgtgcgggggcatcaagcggcaggccgagagggcccgc
gaggaaggcatccggctcttcgccgtggcccccaatcggaacctgcacgagcagggcctg
cgggacatcgccagcacgcccctggagctgtaccgcagcaactacgccaccatgcggccc
gactccaccgacatcgaccaggacaccatcaaccgcatcatcaaggtcatgaaacacgaa
gcttatggagagtgctacaaagtgagctgtctggagatccctgggccacctggccccaag
ggctaccgcggacagaagggtgccaagggcaacatgggtgagccgggagagcctggacag
aagggacgacagggagatccaggcatcgaaggccccattggattcccaggacccaagggt
gttcctggtttcaaaggagagaagggagaatttggagctgacgggcggaagggcgcccct
ggcctggccggcaagaatgggaccgatggacagaagggcaagctggggcgcatcgggcct
cctggctgcaagggagaccctgggaaccggggccccgacgggtacgtgggggaagcaggc
agccccggggagcaaggagaccaaggcgccaagggggacccgggccgcccaggacgcaga
gggcccccgggagaagacggggccaaaggaagtaagggctatcaaggcaacaatggatcc
ccaggaagtcctggcgtgaagggcgccaagggcggaccagggccccgaggacccaaaggc
gagcctggacgcaggggagatcctggaaccaaaggcggcccaggcagcgatggccccaag
ggcgagaagggggaccctggccctgaggggccccggggcctggctggagaggttggcaac
aaaggagccaagggagaccgtggcctgcctggacccaggggcccccagggcgctctcggg
gagcccgggaagcagggatctcggggagaccccggggacgctggtcctcgcggagactca
ggacagcctggccccaagggagaccccggcaggcctggattcagctacccgggacccaga
ggagagcccggagagaaaggcgagcccggcccacgcggccccgaggggggcagaggcgac
ttcggcatgaaaggagccccagggaggaaaggccagaagggtgagcctgcagatcctggt
ccccctggtgagccgggccctcgtgggccgagaggagagccaggactcgagggagagccc
ggcccccccggagaccccggcctcacggagtgtgacgtcatgacctacgtgagggagacc
tgtggctgctgtgactgcgagaagcgctgtggcgccctggacgtggtgttcgtcattgac
agctctgagagcatcggctacaccaacttcacgctggagaagaactttgtcatcaacgtg
gtcaacaggctgggggccatcgccaaggaccccaagtcagagacagggacccgcgtgggc
gttgtgcagtacagccacgagggcaccttcgaggccatccagctggacgacgagcgcatc
aactcgctgtccagcttcaaggaggctgtcaagaacctcgagtggattgcgggaggcacc
tggacgccttctgccctcaagtttgcctacaaccagctcatcaaggagagccggcgccag
aagacccgcgtgttcgctgtggtcatcacagatggccgccacgacccccgggacgatgac
ctcaacctgcgtgcgctctgcaaccatgacgtcacagtgacggccatcggcatcggcgac
atgttccacgagaggcacgagagcgagaacctgtactccatcgcctgtgacaagccacag
caggtgcgcaacatgacgctcttctccgacctggtggccgagaagttcatcgatgacatg
gaggacgtcctgtgcccagaccctcagatcgtgtgcccagacctgccctgccaaacagag
ctgtacgtggcccagtgcacgcagcggccggtggacatcgtcttcctgctggacggctcc
gagcggctgggtgagcagaacttccacaaggcccggcgcttcgtggaggaggtgtcccgg
cggctgacgctggcacgcagggaggacgacccgctcaacgcacgcgtggcgctgctgcag
ttcgggggccgtgacgagcagcaggtggccttcccgctgacctccaacctgacggccatc
cacgaggcgctggccagcgcgcgctacctcaactccttctcgcacgtgggcgcgggcatc
gtgcacgccatcaactacgtggtgcaggacgcacgggccggggcgcgccgccacgctgag
ctggcctttgtgttcctcacggacggcgtcacgggcaacgacagcctggaggaggcggtg
cactccatgcgcaagcagaacgtggtgcccaccgtggtggccgtgggcagcgacgtggac
gcggacgtgctctccaagatcagcctgggcgacgcggccgccgtcttccgagagaaggac
tatgacagcctggcgcagcccggcttcttcgacaggttcatccgctggatctgctag
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