Equus caballus (horse): 100055493
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Entry
100055493 CDS
T01058
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ecb
Equus caballus (horse)
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecb04040
]
100055493 (SCN10A)
Ion channels [BR:
ecb04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100055493 (SCN10A)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
Na_trans_cytopl
IQ
Motif
Other DBs
NCBI-GeneID:
100055493
NCBI-ProteinID:
XP_014587037
Ensembl:
ENSECAG00000017790
VGNC:
22730
LinkDB
All DBs
Position
16:48104880..48196067
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AA seq
1964 aa
AA seq
DB search
MEFPFGSLGTNNFRRFTPESLAETEKRIAAKQAAEKAKDKHREQKDPEEKPRPQLDLKAC
NKLPKFYGELPPELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLHGLLRWFSLFIMVTIVINCVFMTQTEFPERLEYIFTVIYTFEALIKI
LARGFCLNEFAYMRDLWNWLDFSVITLAYLGEVMDLRGISGLRTFRVLRALKTVSVIPGL
KVIVGALIHSVKKLTDVTILTVFCLSVFALVGLQLFKGNLKNKCVKDCTTLNETANYSSY
EKPDFYFIKQGTSDPLLCGNGSDAGHCPKGYLCLKTSDNPDFNYTSFDSFAWAFLSLFRL
MTQDSWERLYQQTLRVSGKTYMIFFVIVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIE
AKEKTFQEALERLRKEQEMLAALGIDTASLHSYNASPLASKNANDRRHRMKPRVSENSTD
DNKSPQSEPYNQRRMSFLGLTSGRRRASHGSVFHVRAPAQDVSFPDGVIDDGAFPEGSES
PRGSLLLNRGASQQGPLPTSPLPQPPNPGSGHGEDGHPTLPTGELAPGAIEVPALDAGQK
KTFLSAEYLNEPFRVRRAMSVVSIMTSVLEELEESEQRCPPCLTRLAQKYLIWECCPTWV
KLKTFLFEIVTDPFAELTITLCIVVNTVFMAMEHHGMSSTFEAMLQIGNIVFTVFFTAEM
VFKIIALDPYYYFQKRWNIFDCIIVTVSLMELGAAKKGSMSVLRTFRLLRVFKLAKSWPT
LNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDSYCDKRHIISAPNEEWPRWHM
YDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLSVMLLGNLVVLNLFIALLLNS
FSADNLMAPEDDGEVNNLQAALARIQAFGRRTRKALCSFFSRPCLLSRFKAEPQLVVKLP
LSSPKAENHIAANTAMGSPAGVPALTGPRDDHSDFITNPNVWVSVPIAEGESDLEDLEED
GEEDARSSGEEASPQGQVRQLQQVGQCEDHLAPRSPGSGMSSEDLAPYLGEKWKDEAAAQ
ATAEGVDDTSSSEGSTVDFPDPEEILRKIPELADDLEEPDDCFTEGCIRHCPCCKVNTSK
SPWATGWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPTVKAMLEYTDRV
FTFIFVFEMLLKWVAYGFKNYFTNAWCWLDFLIVNISLTSLIAKILQYSDMASIKALRTL
RALRPLRALSRFEGMRVVVDALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFKKCIN
TTNEEFSLVPLSIVNNKSDCERQNYTGNFFWVNVKVNFDNVAMGYLALLQVATFKGWMDI
MYAAVDSREENLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQD
IFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDIVIMVLICLNMIT
MMVETDEQSEEKTRVLNKINQFFVAVFTGECVMKMFALRHYYFTNGWNVFDFIVVVLSIG
SLMFSAILTSLGNFLSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGL
LLFLVMFIYSIFGMSSFPHVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILN
TGPPYCDPNLPNSNGSQGNCGSPAMGILFFTSYLIISFLIVVNMYIAVILENFNVATEES
TEPLSEDDFDMFYKTWEQFDPEATQFITFSALSDFADTLSGPLRIPKPNRNILIQMDLPL
VPGDKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQED
ISATVIQKAYRSYVLHRSMTISNAPGVPRAEEEAVSLPDEGFVAFLANENCVLPDKSETA
SATSFPPSYDSVTRGLSDQVNMSTSNSLQNGDETASKEATAPGP
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctgggaactaacaacttccgtcgattcactccggagtcc
ctggcggagactgaaaagcgaattgctgccaagcaggcagcagagaaagccaaggataag
cacagggagcagaaggacccagaagagaagcctcggccccagctagacttgaaagcctgc
aacaagctgcccaagttctatggtgagctcccgccagagctggttggggagccgctggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgcacggccttctcaggtggttc
agtttatttatcatggtcacgattgtgatcaattgtgtgttcatgacccaaactgaattt
ccagagagactcgagtatatcttcactgtcatttacacctttgaagccttgatcaagata
ctggcaagaggattttgtctaaatgagtttgcgtacatgcgagatctttggaactggctg
gattttagcgtcattactctggcataccttggtgaagtgatggatctccgagggatctca
ggcctgcggacgttcagagttcttagagctttaaaaacagtttctgtgatcccggggctg
aaggtcatcgtgggggccctgatccactcggtgaaaaagctgactgatgtgaccatcctc
accgtcttctgcctgagtgtctttgccctggtgggcctgcagctcttcaagggcaacctc
aagaacaaatgtgtcaaagattgcacaactctcaacgagacggccaattactcctcttac
gaaaaaccagatttctacttcattaagcagggcacttctgatcccttactgtgtggcaat
ggatctgatgcaggccactgtcctaaaggttatctctgccttaaaacatctgacaacccg
gattttaactacaccagctttgattcctttgcctgggctttcctctcactgtttcgcctc
atgacacaggattcatgggaacgcctctaccagcagaccctgagggtgtctgggaaaaca
tatatgatcttttttgtgatcgtcatcttcctggggtctttctacttggtcaacctgatc
ttggctgtggtcaccatggcatatgaggagcagaaccaggcaactattgatgaaattgaa
gccaaggagaagacattccaggaggcccttgagaggctccggaaggagcaggagatgctg
gcagcactggggattgacacagcctctctccactcctacaatgcatcacctttagcctcc
aaaaatgccaatgacagaaggcacagaatgaagccaagggtgtcagagaactccacagat
gacaacaaatcgccccaatctgagccttacaaccagcgcaggatgtctttcctaggcctc
acctctggaagacgccgggctagccatggcagtgtgttccatgtccgggcccctgcccaa
gacgtctcattccctgatggggtcatcgatgatggagcctttcctgaaggcagtgaaagc
cctcggggatccctgttgctgaatagaggtgccagccagcaagggcccctccccacgagt
ccgctgcctcaaccccccaaccctggttcagggcatggagaagatggacaccccacattg
cccactggtgagctcgcccctggagccatcgaagttccggcacttgatgcaggacagaag
aagacttttttatcagcagaatacttgaatgaacctttccgagtccgaagggcaatgagt
gttgtcagtatcatgacctctgtccttgaggaactcgaggagtctgagcagagatgccca
ccctgcctgaccagattggctcagaagtatctgatctgggagtgctgccccacgtgggtg
aagctcaagacatttctcttcgagattgtgacggacccctttgcagagctcaccatcacc
ttgtgcatcgtggtgaacaccgtctttatggccatggagcaccacggcatgagttccacc
ttcgaagccatgctccagataggcaacattgtctttactgtgttttttactgctgaaatg
gtcttcaaaatcattgctttggacccctactattacttccagaagaggtggaacatcttt
gactgcatcatcgtcactgtgagcctgatggagctgggcgcagccaagaagggaagcatg
tcagtgctgcggacctttcgcctgctgcgggtcttcaagctggccaagtcctggccaacc
ttaaacacgctcatcaagatcatcggaaactcagtgggggctctggggaacctcactatc
atcctggccattattgtctttgtcttcgctctggttggcaagcagctcctcggggacagc
tactgtgacaagaggcacattatctctgcacccaatgaggaatggccacgctggcacatg
tatgacttcttccactccttccttatcgtcttccgcatcctctgtggagagtggattgag
aacatgtgggcctgcatggaagtcggccagaaatccatatgcctcatccttttcctgtcg
gtgatgctgctggggaacctggtggtgctcaacttgttcattgccctgctgctgaactcc
ttcagcgctgacaacctcatggccccagaggacgacggggaggtgaacaacctgcaggcg
gccctggcacggatccaggcgtttggccgtcgcaccaggaaggccctttgcagcttcttc
agcaggccctgcctgctctcccggttcaaggcagagccccagctcgtggtgaaactccca
ctgtccagccccaaagccgagaaccacattgctgccaacacagccatggggagccctgca
ggggtcccagctctcacaggccccagggatgaccacagtgacttcatcaccaatcctaat
gtgtgggtctctgtgcccattgccgagggtgaatctgacctggaggacttggaggaggat
ggtgaggaggatgctcggagctccggggaggaagcgagcccccaagggcaggtgagacag
ttgcagcaagtcgggcagtgtgaggaccacctggcacccaggagcccaggctctggaatg
tcctctgaggacctggctccctacctgggtgagaagtggaaagacgaggctgctgctcag
gccactgcagagggagtggatgacacgagctcctcagaaggcagcacagtggacttccca
gaccctgaggagatcctgaggaagatccctgagctggcggatgaccttgaagagccagat
gactgcttcacagaaggctgcattcgccactgtccctgctgcaaagtgaacacctccaag
tctccatgggccaccggctggcaggtgcgcaaggcctgctaccgcatcgtggagcacagc
tggtttgagagcttcatcatcttcatgatcctgctcagcagcgggtctctggcctttgaa
gactattaccttgaccagaagcccacggtgaaggccatgctggagtacacggacagggtg
ttcacatttatctttgtgtttgagatgctgctcaagtgggtggcctatggcttcaaaaat
tacttcaccaatgcctggtgttggctggacttcctcattgtgaacatctcactgacaagc
cttatagcgaagatcctgcagtattccgatatggcatccatcaaagcccttcggaccctc
cgtgccctgcggccactgcgtgctctgtctcgatttgaaggcatgcgggtggtggtggat
gccctgctgggcgccatcccatccatcatgaacgtcctcctcgtctgcctcatcttctgg
ctcatcttcagcatcatgggcgtgaacctctttgcagggaagtttaagaagtgcatcaac
accaccaatgaagaattttctcttgtgcctttgtctatcgtgaataacaaatctgactgt
gaacgtcaaaactacaccggcaacttcttttgggtcaatgtgaaggtcaactttgataat
gttgcaatgggttaccttgcacttctgcaggtggcaacctttaaaggctggatggacatc
atgtatgcagctgttgattcccgggaggagaacctgcagcccaagtgggaggacaatgtg
tacatgtacttgtacttcgtcatcttcatcatcttcggcggcttcttcaccctcaatctc
ttcgttggggtcataattgacaacttcaatcaacaaaaaaaaaagttagggggtcaggac
atcttcatgacagaggagcaaaagaagtactacaacgccatgaagaagctgggctccaag
aaaccacagaagcccatcccacggcccctgaacaagtaccagggcttcgtctttgacatc
gtgaccagacaaactttcgacattgtcatcatggtcctcatctgcctcaacatgatcacc
atgatggtggagactgatgagcagagtgaagaaaagacaagagtccttaacaaaatcaac
cagttctttgtggctgtcttcacgggcgagtgtgtcatgaagatgtttgccttgaggcat
tactacttcaccaatggctggaatgtgtttgacttcattgttgtagtcctctccattggg
agcctgatgttttctgcaattcttacgtcacttggaaatttcttatccccaacactcttc
cgagtcatccgcctggcacgaattggccgcatcctcaggctgatccgagcagccaaggga
atccgcacgctgctctttgccctcatgatgtccctgcctgccctcttcaacatcggcctg
ctgctcttcctcgtcatgttcatctactccatctttggaatgtccagcttcccccatgtc
aagtgggaggctggcattgatgacatgttcaacttccagacctttgccaacagcatgctc
tgcctcttccagatcaccacgtcagctggctgggatggtctcctcagccccatcctcaac
acggggcccccctattgcgacccaaatctgcccaacagcaatggctcccaggggaactgt
gggagcccagccatgggcatcctcttcttcacctcctacctcatcatctccttcctcatc
gttgtcaacatgtacattgcagtgatcttggagaacttcaatgtggccacagaggagagc
actgagcccctgagtgaggacgactttgacatgttctataagacttgggagcagttcgac
ccagaggccacccagtttattaccttttctgccctctcagattttgcagacaccctctct
ggccccctgcgaatcccaaaacccaatcggaatatattaatccagatggacctgcccttg
gtccctggggataagatccactgtttggacatcctttttgcctttaccaagaacgttctg
ggagaatctggggagttggattctctgaaggcaaatatggaggagaagttcatggcaact
aatctttcaaaagcatcctatgaaccaatagcaaccaccctccgatggaagcaagaagac
atttcagccactgttattcaaaaggcctatcggagctatgtgctacaccgctccatgaca
atctccaatgccccgggtgtgcccagggctgaggaggaggctgtgtcactcccagatgaa
ggctttgttgcgttcttggcaaacgaaaattgtgtgctcccagacaaatctgaaactgca
tctgccacatctttcccgccatcttatgacagtgtcactagaggtcttagtgatcaagtc
aacatgagcacatctaactcattacaaaatggggatgaaactgccagtaaggaagccact
gcccctgggccctag
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