Equus caballus (horse): 100056679
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Entry
100056679 CDS
T01058
Symbol
MBD4
Name
(RefSeq) methyl-CpG-binding domain protein 4 isoform X1
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
ecb
Equus caballus (horse)
Pathway
ecb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
100056679 (MBD4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ecb03036
]
100056679 (MBD4)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100056679 (MBD4)
Chromosome and associated proteins [BR:
ecb03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
100056679 (MBD4)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
100056679 (MBD4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
100056679
NCBI-ProteinID:
XP_014586891
Ensembl:
ENSECAG00000022106
VGNC:
20007
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All DBs
Position
16:5920346..5929186
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AA seq
571 aa
AA seq
DB search
METPSLGDCGAAPSVSSSERLLPARPCDLRKEDVAPGSETVGKDEKQMVIKSSSECNPLL
QEPIASAQFGDTAVTECHKPVPCGWERVVKQRLSGKTAGRYNVYFISPQGLKFRSKISLA
NYLHKNGENSLKPEDFDFTVLSKRGIKSRYKDRSVAALPSQLQNESNSSNRNLRTRSRWK
KDVLPLPSGSLELQDSRGLSNFTSIPLPPKEDEDVNDADSRKVRKSKGKVTILKGIQIKK
TKTGCRKSPSASVRSNRKRESGYNKADAESEPVVQESQLDRTFCISDATASNKTLSVTSE
EKRLVEETSLSSESDFHFEQITSGVINKLRSAKEAEPNKKCEDAFLESEEITKVDAGERR
EHLHMDILKCGSEMNNCLQTKKDSTSLKIFQEDTISQTQREKRKTSLYFSRKYNKEGLSP
PRRKAFKKWTPPRSPFNLVQETLFHDPWKLLIATIFLNRTSGKMAIPVLWEFLEKYPSAE
VARTADWRDVSELLKPLGLYDLRAKTIIRFSDEYLTKQWRYPIELHGIGKYGNDSYRIFC
INEWKQVHPEDHKLNKYHDWLWENHEKLNLS
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggagactccgagcctgggggactgcggagctgccccctcggtcagctccagtgagcgc
ctactcccagcccggccttgtgacctccgcaaggaagatgttgctccgggatcagagaca
gtgggaaaagatgagaaacaaatggtgataaaaagcagcagtgagtgtaatcccctgcta
caggaacccattgcttctgctcagtttggtgatactgcagtgacggaatgccataagcct
gtcccatgcggatgggaaagagttgtgaagcaaaggttatctgggaaaacagcaggaaga
tataatgtatattttatcagcccacagggactgaagttcagatccaaaatttcacttgct
aattatcttcacaaaaatggagagaattctcttaagccagaagattttgattttaccgta
ctttctaaaaggggcatcaagtcaaggtataaagaccgcagcgtggcagctttgccatcc
caactgcaaaacgaaagtaacagttcaaaccggaacctcaggactcgaagcaggtggaaa
aaagatgtgcttcctctgccaagtggtagtttggaattacaggatagcagaggactatct
aactttacttccattcctttgcctccgaaagaagatgaggatgttaatgatgctgactcc
agaaaggttagaaagtccaaaggaaaggtgactattttgaaaggaattcagattaagaaa
actaaaacaggctgccggaagagtccttcagcttctgttcgaagtaatagaaaaagagaa
tctgggtataataaggcagatgctgaaagtgaacctgttgtgcaagaaagtcagcttgat
agaactttctgcatttctgatgccacagcaagcaacaagaccctcagtgtgaccagtgaa
gaaaagagacttgtagaagaaacatcattgagttcagaatcagattttcattttgaacaa
ataacttctggtgtcataaacaaattacgttcagccaaagaagcagaacccaacaagaag
tgcgaggatgcctttttagaatctgaggaaataacaaaagtagatgctggggaaaggagg
gaacatttgcatatggacattttaaaatgtggctctgaaatgaacaactgcttacaaacc
aagaaagactctacttctttgaaaatatttcaagaagacaccatctcacagacacaaaga
gaaaaaaggaaaacaagcctgtatttttccagaaaatataacaaagaaggtcttagcccc
ccacgacgcaaagcctttaagaagtggacaccccctcggtcaccttttaatctcgtccaa
gaaacactttttcacgatccatggaagctcctcattgcaacaatatttctcaatcggacc
tcaggcaaaatggcaattcctgtactttgggagtttctggagaagtatccttcagctgag
gtggcaagaaccgcagactggagagatgtgtcagaacttcttaaacctcttggtctctac
gatcttcgagcaaaaaccattatcaggttctcagatgaatatctgacaaagcagtggagg
tatccgattgagcttcatgggattggcaaatatggcaatgactcttaccgaattttttgc
atcaatgaatggaagcaggtgcaccctgaagaccataagttaaacaaatatcatgactgg
ctttgggaaaatcatgaaaaattaaatctgtcttaa
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