Equus caballus (horse): 100056980
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Entry
100056980 CDS
T01058
Symbol
GTF2H1
Name
(RefSeq) general transcription factor IIH subunit 1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
ecb
Equus caballus (horse)
Pathway
ecb03022
Basal transcription factors
ecb03420
Nucleotide excision repair
ecb05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
ecb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100056980 (GTF2H1)
09124 Replication and repair
03420 Nucleotide excision repair
100056980 (GTF2H1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
100056980 (GTF2H1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ecb03021
]
100056980 (GTF2H1)
03400 DNA repair and recombination proteins [BR:
ecb03400
]
100056980 (GTF2H1)
Transcription machinery [BR:
ecb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100056980 (GTF2H1)
DNA repair and recombination proteins [BR:
ecb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100056980 (GTF2H1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_TFIIH
BSD
Motif
Other DBs
NCBI-GeneID:
100056980
NCBI-ProteinID:
XP_001505012
Ensembl:
ENSECAG00000019056
VGNC:
18639
LinkDB
All DBs
Position
7:88773407..88808387
Genome browser
AA seq
548 aa
AA seq
DB search
MATSSEEVLLVVKKVRQKKQDGALYLMAERIAWAPEGKDRFTISHMYADIKCQKISPEGK
AKIQLQLVLHAGDTTNFHFSNESTAVKERDAVKDLLQQLLPKFKRKANKELEEKNRMLQE
DPVLFQLYKDLVVSQVISAEEFWANRLNGNAAESSSTSNHKQDVGISAAFLADVRPQTDG
CNGLRYNLTSDIIESIFRTYPAVKMKYAENVPHNMTEKEFWTRFFQSHYFHRDRLNTGSK
DLFAECAKIDEKGLKTMVSLGVKNPLLDLTALEDKPLDEGYGISSVPSTSNSKSIKENSN
AAIIKRFNHHSAMVLAAGLRKQEAQNEQNGEPSGIDGNSGDADSFQPAVKRAKLQESIEY
EDLGKNNSIKTIALNLKKSDRYYHGPTPIQSLQYATSQDIINSFQSIRQEMEAYAPKLTQ
VLSSSAASSTITALSPGGALMQGGTQQAINQMVPNDIQSELKHLYVAVGELLRHFWSCFP
VNTPFLEEKVVKMKSNLERFQVTKLCPFQEKIRRQYLSTNLVSHIEEMLQTAYNKLHTWQ
SRRLMKKT
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcaacttcatctgaagaagttctgctggttgtgaagaaggtgcgtcagaagaagcag
gatggagctctgtacctcatggcagaaagaattgcctgggcacctgaaggcaaagacaga
tttacaatcagccatatgtatgcggatattaaatgccagaaaatcagtccagaaggaaaa
gctaaaattcagcttcagctggtcctgcatgcaggggacacaactaacttccatttttcc
aatgagagcacagcagtgaaagagcgggatgcggtgaaggacctccttcagcagctgctg
cccaaattcaagaggaaagcaaataaagaactggaggagaagaacagaatgctgcaagag
gatcctgttctgtttcagctttataaagaccttgtcgtgagtcaggtgatcagtgctgag
gaattctgggccaatcgtttaaacgggaatgcagcggagagttcttccacatctaatcat
aagcaggatgttggcatttctgcagcatttctggctgatgtccggccccaaacagatgga
tgtaatggtctgagatacaatttaacttctgatataattgagtccatatttaggacctat
ccagcagtaaaaatgaaatatgcagaaaatgttccccacaacatgacagaaaaggaattc
tggacacgtttttttcagtcccattattttcacagggaccggctgaatacggggtcaaag
gacctctttgcagaatgtgccaaaatagatgaaaaagggttaaaaacaatggtttcatta
ggagtgaaaaacccactacttgatttgacagctttggaagataaaccattagatgagggc
tatggcatttcctctgtgccatccacttctaattctaaatccataaaggagaatagtaat
gctgccatcatcaagaggtttaaccatcacagtgccatggtcctggcagcaggtctcagg
aaacaagaagcacaaaatgaacaaaatggtgagcccagcggcatcgatggaaattccgga
gatgcagacagctttcagccagcagtcaaaagggcgaagttacaagagtccattgaatat
gaagacttgggaaaaaataattccataaaaacgattgcactaaacctcaagaagtcagat
aggtattatcatggtccaactccaatccagtcactacagtatgcaacaagtcaggacatt
attaattcttttcaaagtattagacaagaaatggaagcttatgcacccaaattaactcag
gttctctcaagtagcgctgccagtagtaccatcacagccctgtcacctggaggagcactt
atgcagggagggacacagcaagccataaaccagatggtgccaaatgatattcagtctgaa
ttaaaacacctgtatgtggctgttggggaacttctgcggcacttctggtcctgctttccc
gttaatacaccattcctagaagaaaaggtagtgaaaatgaaaagtaatttggaacgattc
caagttacaaagctctgcccattccaagaaaaaattcggagacagtatttaagcacaaat
ttggtaagtcacatagaagagatgctccagacagcctataacaagctccacacgtggcag
tcacggcgtctgatgaagaaaacgtga
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